RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Rnase9P60154 184 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Usf1Q61069 310 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Duxbl2Q7TNE6 350 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Ifna14Q810G3 189 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Olfr1195Q8VG21 308 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Ssbp3Q9D032 388 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Zdhhc16Q9ESG8 361 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Trav7n-4A0A075B620 113 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Scgb1b3J3QJY4 93 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm9602J3QPD5 205 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 NgfP01139 241 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Hoxa1P09022 331 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 P18530 117 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Rhbdd1Q8BHC7 315 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Ap5s1Q9D742 170 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Dmxl1Q6PNC0 3013 aa12.16□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm21974F6W3F3 119 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm21900J3QP38 180 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Lyz1P17897 148 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Prrx1P63013 245 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Cited1P97769 203 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Prickle3Q80VL3 624 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Vmn1r202Q8R259 302 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Olfr476Q8VGI4 310 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Tmem178aQ9CZ16 297 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 PigpQ9JHG1 132 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Crybb1Q9WVJ5 250 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Col6a3E9PWQ3 3284 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm11027G8JL69 66 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Gm21060J3KMU4 56 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 P03980 138 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Khdc1bP0C7A0 126 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 A930003A15RikQ3U552 87 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Znrd1Q791N7 123 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Zmat4Q8BZ94 229 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Cacna1aP97445 2368 aa12.15□□□□□ -0.46
Nup54-201ENSMUST00000038514 Arfgef3Q3UGY8 2170 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Trav8n-2A0A075B633 112 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Gm12886B1AZM5 119 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Txn2P97493 166 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr1535Q7TQU0 326 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 C330021F23RikQ8C7T0 141 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr262Q8VFV8 312 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 MmdQ9CQY7 238 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Pla2g2eQ9QUL3 142 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 NacaP70670 2187 aaKnown RBP12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 F2rl2O08675 369 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Ccl2P10148 148 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Dnd1Q6VY05 352 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Cdcp2Q8BQH6 427 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr492Q8VFD1 314 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr481Q8VGI5 312 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Ube2cQ9D1C1 179 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Fkbp11Q9D1M7 201 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 4930583I09RikQ9D2E3 102 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 4933414I15RikQ9D4D5 133 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Vmn1r50Q9EP51 310 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 V1ra8Q9EQ48 279 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 PpbpQ9EQI5 113 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Mixl1Q9WUI0 231 aa12.14□□□□□ -0.47
Nup54-201ENSMUST00000038514 Q08AU9 97 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Ms4a13Q5FWC3 203 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Bst1Q64277 311 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Rln3Q8CHK2 141 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr1271Q8VG62 305 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Etfrf1Q91V16 86 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Fgfrl1Q91V87 529 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Gab2Q9Z1S8 665 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 TncQ80YX1 2110 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr177E9Q7W1 309 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Tnfaip6O08859 275 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 P04943 107 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Prop1P97458 223 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Trav15-1-dv6-1Q5R1D2 117 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Fam19a2Q7TPG7 131 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Elovl5Q8BHI7 299 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Gm9944Q8C559 102 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Oxld1Q9CR10 201 aa12.13□□□□□ -0.47
Nup54-201ENSMUST00000038514 Frem1Q684R7 2191 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 AponG3X9D6 251 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr1331K7N684 317 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Ighv3-6P18531 116 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr1419Q7TQS2 343 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr1333Q7TQV7 317 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Il25Q8VHH8 169 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Fam103a1Q9CQY2 119 aaKnown RBP12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr954Q9EQB6 314 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Trav4-4-dv10A0A075B651 110 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Trav3n-3A0A0G2JEM0 114 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Igkv14-130A0A0G2JF45 117 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Awat1A2ADU9 328 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 DdtO35215 118 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Rpl8P62918 257 aaKnown RBP12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr148Q60887 310 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr123Q8VFQ1 309 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Gatad1Q920S3 266 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Pf4Q9Z126 105 aa12.12□□□□□ -0.47
Nup54-201ENSMUST00000038514 Olfr466E9Q2B9 308 aa12.11□□□□□ -0.47
Nup54-201ENSMUST00000038514 Tbr1Q64336 681 aa12.11□□□□□ -0.47
Nup54-201ENSMUST00000038514 Nhp2Q9CRB2 153 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms