RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Olfr1441Q8VFV3 318 aa8.54□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Cacna1aP97445 2368 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Ighv1-37A0A0A6YW32 117 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Zfp27P10077 819 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Adam8Q05910 826 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Ovol2Q8CIV7 274 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 CrebbpP45481 2441 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Ighv7-2A0A0A6YX91 119 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Ascl2O35885 263 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Adrb3P25962 400 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Trappc1Q5NCF2 145 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm17334Q8C6U3 126 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tmem126aQ9D8Y1 196 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 MpdzQ8VBX6 2055 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr779E9PUS9 130 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Srsf6Q3TWW8 339 aaKnown RBP8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm4792Q569Q2 183 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm5868Q8BJG1 145 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr1339Q8VGB1 315 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Lyrm7Q9DA03 104 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tmem89Q9DA04 169 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Spry4Q9WTP2 300 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Exph5Q0VAV2 1960 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Ighv6-3A0A075B5T2 118 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Ighv1-34A0A075B5V2 117 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 D830044I16RikA0A1D5RM53 117 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Hist1h2bmP10854 126 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Hist1h2bhQ64478 126 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Hist2h2bbQ64525 126 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Hist1h2bcQ6ZWY9 126 aaKnown RBP8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Mrpl20Q9CQL4 149 aa8.53□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gpr179E9PY61 2293 aa8.52□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Ints1Q6P4S8 2195 aa8.52□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Trav13n-4A0A0G2JG01 110 aa8.52□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Wisp3D3Z5L9 354 aa8.52□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 SlaQ60898 281 aa8.52□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Spink6Q8BT20 105 aa8.52□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Trpt1Q8K3A2 249 aa8.52□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr1192-ps1A0A1L1SRD7 309 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gm10073E9Q3T0 114 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Cxcl13O55038 109 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 HrkP62816 92 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Zfp72Q0VFY0 435 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 B020031M17RikQ3UT11 173 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Scnm1Q8K136 229 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Rnf151Q9CQ29 239 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 ChodlQ9CXM0 273 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Olfr1369-ps1A0A140T8K7 317 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Igkv13-84A0A140T8N3 115 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 A0A1Y7VLU2 103 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 NgfP01139 241 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Trav3-3Q5R1C3 114 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Olfr1330Q8VEY6 315 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Tmed6Q9CQG0 239 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gdf15Q9Z0J7 303 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 MgamB5THE2 1827 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Igkv12-89A0A0G2JGW8 112 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Olfr150Q60895 312 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Lmo1Q924W9 156 aa8.52□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 AsmtD3KU66 387 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Atp5iQ06185 71 aaKnown RBP8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Tmprss12Q3V0Q7 336 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Zfp420Q7TMN8 578 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 MavsQ8VCF0 503 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Errfi1Q99JZ7 461 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ighv5-12-4A0A0A6YWG4 117 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ighv1-36A0A0A6YXT2 117 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Fgf4P11403 202 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ormdl3Q9CPZ6 153 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Psmg3Q9CZH3 122 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Scn2aA0A0J9YTW6 2006 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Trav16A0A075B653 116 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gm21874J3QNZ6 232 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gata2O09100 480 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 P04945 108 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 P18525 117 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 ElnP54320 860 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Rspo3Q2TJ95 277 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Onecut2Q6XBJ3 505 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Tmem167aQ9CR64 72 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Olfr149Q60888 311 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Dlx1Q64317 255 aa8.51□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Trbv12-2A0A0B4J1H1 124 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 GchfrP99025 84 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gm5148Q8BGG2 154 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Olfr982Q8VGB3 321 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ighv1-7A0A075B5T7 117 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Igkv4-51A0N8I8 119 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Gm12830F6XVH0 157 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 TymsP07607 307 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 C1qtnf9Q4ZJN1 333 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Cdkn2aQ64364 169 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Tmem100Q9CQG9 134 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Pgpep1lQ9CWB5 130 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ccpg1osV9GXK1 122 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ighv7-3A0A075B5R2 120 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Ighv7-4A0A0A6YXL5 121 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 BC035044E0CXF8 138 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Eid2bE9Q2Y0 151 aa8.5□□□□□ -1.05
Ccdc40-201ENSMUST00000035935 Znf431E9QAG8 526 aa8.5□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms