RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Ccl6P27784 116 aa12.01□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Cox6b1P56391 86 aaKnown RBP12.01□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Slc17a9Q8VCL5 447 aa12.01□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Tmem126aQ9D8Y1 196 aa12.01□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Lhx2Q9Z0S2 406 aa12.01□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Igkv3-2A0A075B5P0 119 aa12.01□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Lrp10Q7TQH7 713 aa12.01□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Mrps11Q9DCA2 191 aaKnown RBP12.01□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Trbv15A0A0A6YYE3 115 aa12.01□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm5819E9PZ96 154 aa12.01□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Tm4sf20Q9CQY8 226 aa12.01□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Rpl35aO55142 110 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Olfr523Q8VFE7 317 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Samd13D3YUG0 102 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Prr3Q811B5 190 aaKnown RBP12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Nhlrc3Q8CCH2 347 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Prss29Q99MS4 279 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 DnlzQ9D113 177 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 4931428L18RikQ9D4S9 127 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 SisF8VQM5 1818 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Igkv13-84A0A140T8N3 115 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Cd8bP10300 213 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 RhogP84096 191 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Shank3Q4ACU6 1730 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Fxyd7P59648 80 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Srsf6Q3TWW8 339 aaKnown RBP12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Shisa6Q3UH99 525 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Cldn23Q9D7D7 296 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Suclg1Q9WUM5 346 aaKnown RBP12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Repin1Q5U4E2 545 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Smim8Q9CQQ0 97 aa12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 ChtopQ9CY57 249 aaKnown RBP12□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Ighv1-47A0A0A6YY41 117 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Trbv13-3A0A0B4J1H2 113 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Sap30O88574 220 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Pax1P09084 446 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Wipf3P0C7L0 485 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Zfp248Q640N4 576 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Ubr3Q5U430 1889 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm45783A0A1B0GT48 74 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm11232Q5SPI8 295 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Bud31Q6PGH1 103 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Mzt1Q8BUR9 78 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Trav7-4A0A075B6C1 113 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm12845A0A0N4SUM5 588 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Trav7d-4Q5R1H9 113 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Znf431E9QAG8 526 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Csrp2P97314 193 aaKnown RBP11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Klf13Q9JJZ6 289 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm29289A0A087WPY7 166 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm4064A0A087WR82 380 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm10352B2RWR6 380 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Sfta2E9PXB6 77 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm21693J3QK27 380 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Rbmy1a1O35698 380 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Atp5g2P56383 146 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Nkain3Q3URJ8 181 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Olfr223Q8VF69 319 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Osr1Q9WVG7 266 aa11.99□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm15080A2BI02 449 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Srp19Q9D7A6 144 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Ccpg1osV9GXK1 122 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Olfr1381Q7TQT4 311 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Q8CF25 301 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 FocadA2AKG8 1798 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Tmem91Q8C581 172 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Cela3bQ9CQ52 269 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm10645Q3UPY1 145 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Prr23a3Q9CWP9 254 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Ighv7-2A0A0A6YX91 119 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm5089A1L3C8 106 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Defa26Q3L180 93 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Nhlrc1Q8BR37 401 aa11.98□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm29644A0A087WPG2 191 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Iqcf6G3UWF2 157 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm21789J3QMZ1 123 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm21870J3QPN2 123 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm21883J3QPV3 123 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Mbnl2Q8C181 373 aaKnown RBP11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Hs3st3b1Q9QZS6 390 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Ighv1-20A0A0A6YX66 117 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 MsmbO08540 113 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 P01724 129 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 P01727 129 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Leap2Q91V13 76 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Nat6Q9R123 314 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Slc25a15Q9WVD5 301 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm42517A0A1Y7VLQ2 374 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Sh3bgrl3Q91VW3 93 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 P01723 117 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Stac2Q8R1B0 408 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Ighv1-37A0A0A6YW32 117 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Zfp72Q0VFY0 435 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Tmprss12Q3V0Q7 336 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 C1ql4Q4ZJM9 238 aa11.97□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Ighv1-22A0A075B5U7 117 aa11.96□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Pglyrp3A1A547 347 aa11.96□□□□□ -0.49
Col4a1-201ENSMUST00000033898 SellP18337 372 aa11.96□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Gm904Q3V2L5 102 aa11.96□□□□□ -0.49
Col4a1-201ENSMUST00000033898 Olfr317Q5NCD6 327 aa11.96□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms