RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm10384Q3UQ87 92 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Olfr894Q9EQB2 313 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 PdfS4R2K0 231 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Igkv6-23A0A140T8N5 115 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gm12830F6XVH0 157 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Tac3P55099 116 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Trav6n-6A0A075B6B2 114 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Rdh16O54909 317 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Tnfrsf1aP25118 454 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Oraov1Q8CH62 137 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Rhbdd2Q8VEK2 361 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 1810011H11RikE9PVZ2 95 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 P03980 138 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 C5ar1P30993 351 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Rnase9P60154 184 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 EpopQ7TNS8 369 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 C1qtnf4Q8R066 326 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Vmn1r216Q8R257 298 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Olfr262Q8VFV8 312 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gkn3Q9D0T7 191 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gm9602J3QPD5 205 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 P04942 107 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gucd1Q8BZI6 239 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Ap5s1Q9D742 170 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Tbr1Q64336 681 aa13.68□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gabra2P26048 451 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 ClcP97400 68 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 SeleQ00690 612 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Ssbp3Q9D032 388 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gm12728V9GX31 77 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Igsf23B2RTN2 239 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Zfp58P16372 489 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 S100a8P27005 89 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Tnfsf18Q7TS55 173 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 CstadQ9D245 104 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Tmub1Q9JMG3 245 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gm21913J3KML9 361 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 3110021N24RikJ3QMN2 152 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gm21776J3QPJ5 361 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 P0C913 63 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Pate4Q09098 99 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gm813Q3UWK9 176 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Rhox10Q4TU83 196 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Ammecr1lQ8JZZ6 310 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Nabp2Q8R2Y9 212 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 D730048I06RikQ9CQB8 106 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Ascl3Q9JJR7 174 aa13.67□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gm26727M0QWT1 121 aa13.66□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Cox7a2lQ61387 111 aa13.66□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Znf787Q8BIF9 381 aa13.66□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Olfr961Q9EQ84 314 aa13.66□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gm9733Q1AN91 178 aa13.66□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Sp9Q64HY3 484 aa13.66□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gm15292L7N231 93 aa13.66□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Trav15-1-dv6-1Q5R1D2 117 aa13.66□□□□□ -0.22
Ctcf-201ENSMUST00000005841 SspnQ62147 216 aa13.66□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Pex7P97865 318 aa13.65□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Vmn1r50Q9EP51 310 aa13.65□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Foxl1Q64731 336 aa13.65□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Cxxc4Q6NXI8 198 aa13.65□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Iba57Q8CAK1 358 aaKnown RBP13.65□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Habp2Q8K0D2 558 aa13.65□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Actl6bQ99MR0 426 aa13.65□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Olfr1097A2AVA9 315 aa13.65□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr303Q8VFP0 319 aa13.65□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Acp1Q9D358 158 aa13.65□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Ighv9-4A0A0A6YWH6 117 aa13.64□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Znf146Q8BQN6 292 aa13.64□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Tmem167aQ9CR64 72 aa13.64□□□□□ -0.23
Ctcf-201ENSMUST00000005841 KhkP97328 298 aa13.64□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Abhd17bQ7M759 288 aa13.64□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Ndfip1Q8R0W6 221 aa13.64□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr266Q8VFC3 316 aa13.64□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gfra3O35118 397 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 ApcsP12246 224 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Shisal1Q0VBP7 198 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Rph3alQ768S4 302 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Vma21Q78T54 101 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 EsdQ9R0P3 282 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Pde4dipQ80YT7 2224 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr965Q7TRA7 312 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Vash2Q8C5G2 355 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Plrg1Q922V4 513 aaKnown RBP13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Pf4Q9Z126 105 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Trav14-3A0A075B607 120 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gm27021M0QWE2 156 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr1183Q8VFF8 303 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Hs3st3b1Q9QZS6 390 aa13.63□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Trav6n-7A0A075B6A6 116 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gata3P23772 443 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Rpl19P84099 196 aaKnown RBP13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Q9CQ90 155 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 DscamQ9ERC8 2013 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 D330020A13RikQ8C799 211 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Mrps18cQ8R2L5 143 aaKnown RBP13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gatad1Q920S3 266 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr1104A2AVB5 310 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Ccdc71lE9Q4T4 218 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gm21775J3KMK6 180 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Phxr2P15972 65 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms