RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr1179A2AUS6 307 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm21732J3QM79 361 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm21921J3QNB5 361 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 Acrv1P50289 261 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 Fam110aQ8R184 296 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 Il25Q8VHH8 169 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 CnmdQ9Z1F6 334 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm5741B2RVA4 72 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr715bE9Q725 315 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 Cd79bP15530 228 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 RanP62827 216 aaKnown RBP13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 F7P70375 446 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 Wipf2Q6PEV3 440 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr1475Q8VEV6 314 aa13.34□□□□□ -0.27
Shh-201ENSMUST00000002708 Trav6d-3A0A075B6B3 112 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Ighv9-3A0A0B4J1J5 117 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Cited1P97769 203 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Shisal1Q0VBP7 198 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Trav6-3Q5R1E6 112 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Slc36a4Q8CH36 500 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Cotl1Q9CQI6 142 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Q9D8L0 127 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Olfr959Q9EQ86 311 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Tmem9bQ9JJR8 199 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Thap8E9Q695 213 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Olfr147Q60886 317 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Olfr1102Q8VES2 324 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 GrhprQ91Z53 328 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Ctnnbip1Q9JJN6 81 aa13.33□□□□□ -0.28
Shh-201ENSMUST00000002708 Ighv1-15A0A0A6YXA5 117 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 AdipoqQ60994 247 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 Gpr87Q99MT7 358 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 Timm10bQ9WV96 100 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 Trav7-4A0A075B6C1 113 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 Gm4565A0A140LJ87 301 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 Olfr1024A2ASU7 327 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 Gm6176J3QK59 301 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 Gm27021M0QWE2 156 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 GchfrP99025 84 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 Gm4567Q3UTA8 301 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 Trav7d-4Q5R1H9 113 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 Trav6d-4Q5R1I0 115 aa13.32□□□□□ -0.28
Shh-201ENSMUST00000002708 Olfr978E9Q985 311 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 Lgals1P16045 135 aaKnown RBP13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 Tmem91Q8C581 172 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 ChtopQ9CY57 249 aaKnown RBP13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 Abca1P41233 2261 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 Sult1a1P52840 291 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 Smim19Q80ZU4 107 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 Znf146Q8BQN6 292 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 Fhl4Q8CDC8 279 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 F5O88783 2183 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 Trav16A0A075B653 116 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 F2rl2O08675 369 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 P18529 117 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 Ifi27l2bQ8VC49 283 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 Tmem167aQ9CR64 72 aa13.31□□□□□ -0.28
Shh-201ENSMUST00000002708 Ighv5-12-4A0A0A6YWG4 117 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Trbv19A0A0B4J1H4 117 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 P18532 116 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Gimap1P70224 277 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Tpsab1Q02844 273 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Jpt2Q6PGH2 190 aaKnown RBP13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Olfr33Q8VGX7 318 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Abca7Q91V24 2159 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Gm12886B1AZM5 119 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Ang4Q3TMQ6 144 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Usf1Q61069 310 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Tmem204Q7TQI0 226 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Trank1Q8BV79 2999 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Olfr1462Q8VFW3 307 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Q9CQ90 155 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 TecrQ9CY27 308 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Vmn1r50Q9EP51 310 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Cxcr6Q9EQ16 351 aa13.3□□□□□ -0.28
Shh-201ENSMUST00000002708 Gm9602J3QPD5 205 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 P03980 138 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 Dkk4Q8VEJ3 221 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 4933414I15RikQ9D4D5 133 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 Zzef1Q5SSH7 2924 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 TracA0A075B662 137 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 Tnfaip6O08859 275 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 Ccl2P10148 148 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 Gng5Q80SZ7 68 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 Tmem167bQ80X45 74 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 Rhbdd1Q8BHC7 315 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 Olfr476Q8VGI4 310 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 Fkbp11Q9D1M7 201 aa13.29□□□□□ -0.28
Shh-201ENSMUST00000002708 Zfp930A0A1D5RM15 441 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 Ube2l3P68037 154 aaKnown RBP13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 ElaneQ3UP87 265 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 B020031M17RikQ3UT11 173 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 Tas2r114Q7M722 309 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 Elovl5Q8BHI7 299 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 CrhQ8CIT0 187 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 Necap1Q9CR95 275 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 Col13a1Q9R1N9 751 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 P01792 123 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 Pdlim4P70271 330 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 Rnd1Q8BLR7 232 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 82.6 ms