RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 UTF1Q5T230 341 aa7.48□□□□□ -1.21
CLTCL1-211ENST00000621271 FAM222AQ5U5X8 452 aa7.48□□□□□ -1.21
CLTCL1-211ENST00000621271 GTSF1Q8WW33 167 aa7.48□□□□□ -1.21
CLTCL1-211ENST00000621271 LINC00173Q6ZV60 143 aa7.48□□□□□ -1.21
CLTCL1-211ENST00000621271 ODF3BA8MYP8 253 aa7.48□□□□□ -1.21
CLTCL1-211ENST00000621271 TAX1BP3O14907 124 aa7.48□□□□□ -1.21
CLTCL1-211ENST00000621271 NAV3Q8IVL0 2385 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 LRCOL1A6NCL2 159 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 PRAC2D3DTV9 90 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 IFITM1P13164 125 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 IGF2RP11717 2491 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 EML6Q6ZMW3 1958 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 C9orf153Q5TBE3 101 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 B9D2Q9BPU9 175 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 TRAV12-1A0A0B4J245 112 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 TINCRA0A1B0GVN0 87 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 CRYGDP07320 174 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 SPANXDQ9BXN6 97 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 IGF1P05019 195 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 ORMDL1Q9P0S3 153 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 SPTBN4Q9H254 2564 aa7.47□□□□□ -1.21
CLTCL1-211ENST00000621271 ANKRD39Q53RE8 183 aa7.46□□□□□ -1.21
CLTCL1-211ENST00000621271 ZFP2Q6ZN57 461 aa7.46□□□□□ -1.21
CLTCL1-211ENST00000621271 LGALS9O00182 355 aa7.46□□□□□ -1.22
CLTCL1-211ENST00000621271 GATA1P15976 413 aaPredicted RBP7.46□□□□□ -1.22
CLTCL1-211ENST00000621271 DEFB114Q30KQ6 69 aa7.46□□□□□ -1.22
CLTCL1-211ENST00000621271 SND1-IT1Q9HBX3 110 aa7.46□□□□□ -1.22
CLTCL1-211ENST00000621271 DEFB1P60022 68 aa7.46□□□□□ -1.22
CLTCL1-211ENST00000621271 TRBV10-1A0A0K0K1A3 114 aa7.46□□□□□ -1.22
CLTCL1-211ENST00000621271 MIFP14174 115 aa7.46□□□□□ -1.22
CLTCL1-211ENST00000621271 PATE2Q6UY27 113 aa7.46□□□□□ -1.22
CLTCL1-211ENST00000621271 LINC00482Q8N8I6 264 aa7.46□□□□□ -1.22
CLTCL1-211ENST00000621271 TRAV10A0A0B4J240 114 aa7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 CHD3Q12873 2000 aaKnown RBP7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 LY6G6CO95867 125 aa7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 YPEL4Q96NS1 127 aa7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 ADAMTS9Q9P2N4 1935 aa7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 A0A0J9YXV3 536 aa7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 PRSS47A8MTI9 375 aa7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 ODF3L1Q8IXM7 274 aa7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 OPRPNQ99935 248 aaPredicted RBP7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 IGLV2-14P01704 120 aa7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 CARD19Q96LW7 228 aa7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 PTPRSQ13332 1948 aa7.45□□□□□ -1.22
CLTCL1-211ENST00000621271 MED14OSP0DP75 135 aa7.44□□□□□ -1.22
CLTCL1-211ENST00000621271 LINC01548A6NM66 108 aa7.44□□□□□ -1.22
CLTCL1-211ENST00000621271 FSTL3O95633 263 aa7.44□□□□□ -1.22
CLTCL1-211ENST00000621271 FRMD6-AS1P0C7T7 363 aa7.44□□□□□ -1.22
CLTCL1-211ENST00000621271 LINC01006Q8NI28 216 aa7.44□□□□□ -1.22
CLTCL1-211ENST00000621271 FAM167A-AS1Q96KT0 104 aa7.44□□□□□ -1.22
CLTCL1-211ENST00000621271 IGHV4-28A0A0C4DH34 117 aa7.44□□□□□ -1.22
CLTCL1-211ENST00000621271 C7orf33Q8WU49 177 aa7.44□□□□□ -1.22
CLTCL1-211ENST00000621271 CCDC140Q96MF4 163 aa7.43□□□□□ -1.22
CLTCL1-211ENST00000621271 MSRB1Q9NZV6 116 aa7.43□□□□□ -1.22
CLTCL1-211ENST00000621271 MDFICQ9P1T7 246 aa7.43□□□□□ -1.22
CLTCL1-211ENST00000621271 HIGD2BQ4VC39 106 aa7.43□□□□□ -1.22
CLTCL1-211ENST00000621271 NACAE9PAV3 2078 aa7.43□□□□□ -1.22
CLTCL1-211ENST00000621271 Q6ZTI0 123 aa7.43□□□□□ -1.22
CLTCL1-211ENST00000621271 HIGD1BQ9P298 99 aa7.43□□□□□ -1.22
CLTCL1-211ENST00000621271 NCKAP5O14513 1909 aa7.43□□□□□ -1.22
CLTCL1-211ENST00000621271 NCR3O14931 201 aa7.42□□□□□ -1.22
CLTCL1-211ENST00000621271 C11orf71Q6IPW1 123 aa7.42□□□□□ -1.22
CLTCL1-211ENST00000621271 NFE4Q86UQ8 179 aa7.42□□□□□ -1.22
CLTCL1-211ENST00000621271 C22orf34Q6ZV56 151 aa7.42□□□□□ -1.22
CLTCL1-211ENST00000621271 KIR2DL5BQ8NHK3 375 aa7.42□□□□□ -1.22
CLTCL1-211ENST00000621271 KMT2EQ8IZD2 1858 aa7.42□□□□□ -1.22
CLTCL1-211ENST00000621271 A0A087WZ39 114 aa7.42□□□□□ -1.22
CLTCL1-211ENST00000621271 TRACP01848 142 aa7.42□□□□□ -1.22
CLTCL1-211ENST00000621271 E7EUB6 86 aa7.42□□□□□ -1.22
CLTCL1-211ENST00000621271 H0YGX0 51 aa7.42□□□□□ -1.22
CLTCL1-211ENST00000621271 NTN5Q8WTR8 489 aaPredicted RBP7.42□□□□□ -1.22
CLTCL1-211ENST00000621271 FXYD2P54710 66 aa7.41□□□□□ -1.22
CLTCL1-211ENST00000621271 REG3AQ06141 175 aa7.41□□□□□ -1.22
CLTCL1-211ENST00000621271 IGLV2-18A0A075B6J9 118 aa7.41□□□□□ -1.22
CLTCL1-211ENST00000621271 G3V4G9 280 aa7.41□□□□□ -1.22
CLTCL1-211ENST00000621271 CFC1BP0CG36 223 aa7.41□□□□□ -1.22
CLTCL1-211ENST00000621271 CFC1P0CG37 223 aa7.41□□□□□ -1.22
CLTCL1-211ENST00000621271 DIRC1Q969H9 104 aa7.41□□□□□ -1.22
CLTCL1-211ENST00000621271 LINC00269Q8N2A0 174 aa7.4□□□□□ -1.22
CLTCL1-211ENST00000621271 PSMG3-AS1Q96PY0 264 aa7.4□□□□□ -1.22
CLTCL1-211ENST00000621271 HIGD2AQ9BW72 106 aa7.4□□□□□ -1.22
CLTCL1-211ENST00000621271 ZNF106Q9H2Y7 1883 aaKnown RBP7.4□□□□□ -1.22
CLTCL1-211ENST00000621271 H3BQ85 93 aa7.4□□□□□ -1.22
CLTCL1-211ENST00000621271 K7EQG2 157 aa7.4□□□□□ -1.22
CLTCL1-211ENST00000621271 M0R2N4 97 aa7.4□□□□□ -1.22
CLTCL1-211ENST00000621271 KIF26AQ9ULI4 1882 aaPredicted RBP7.4□□□□□ -1.22
CLTCL1-211ENST00000621271 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.4□□□□□ -1.23
CLTCL1-211ENST00000621271 P0C879 139 aa7.4□□□□□ -1.23
CLTCL1-211ENST00000621271 TRBV6-1A0A0K0K1D8 114 aa7.4□□□□□ -1.23
CLTCL1-211ENST00000621271 BAALC-AS2P0C853 105 aa7.4□□□□□ -1.23
CLTCL1-211ENST00000621271 RPL39P62891 51 aaKnown RBP7.4□□□□□ -1.23
CLTCL1-211ENST00000621271 B5MCH6 92 aa7.39□□□□□ -1.23
CLTCL1-211ENST00000621271 WFDC2Q14508 124 aa7.39□□□□□ -1.23
CLTCL1-211ENST00000621271 PRB2P02812 416 aaPredicted RBP7.39□□□□□ -1.23
CLTCL1-211ENST00000621271 CHKB-CPT1BH3BT56 60 aa7.39□□□□□ -1.23
CLTCL1-211ENST00000621271 ZNF295-AS1Q8N0V1 137 aa7.39□□□□□ -1.23
CLTCL1-211ENST00000621271 ODF3Q96PU9 254 aa7.39□□□□□ -1.23
CLTCL1-211ENST00000621271 DSCAMO60469 2012 aa7.39□□□□□ -1.23
CLTCL1-211ENST00000621271 FREM1Q5H8C1 2179 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms