RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-208ENST00000564634 ZNF727A8MUV8 499 aa17.02■□□□□ 0.32
CYLD-208ENST00000564634 F5H697 171 aa17.02■□□□□ 0.32
CYLD-208ENST00000564634 LINC01556Q5JQF7 62 aa17.02■□□□□ 0.32
CYLD-208ENST00000564634 FRZBQ92765 325 aa17.02■□□□□ 0.32
CYLD-208ENST00000564634 TRBV7-3A0A075B6L6 115 aa17.01■□□□□ 0.31
CYLD-208ENST00000564634 A0A087WWC5 75 aa17.01■□□□□ 0.31
CYLD-208ENST00000564634 GATCO43716 136 aaKnown RBP17.01■□□□□ 0.31
CYLD-208ENST00000564634 OR10G8Q8NGN5 311 aa17.01■□□□□ 0.31
CYLD-208ENST00000564634 MSRB1Q9NZV6 116 aa17.01■□□□□ 0.31
CYLD-208ENST00000564634 CTRLP40313 264 aa17■□□□□ 0.31
CYLD-208ENST00000564634 CDPF1Q6NVV7 123 aa17■□□□□ 0.31
CYLD-208ENST00000564634 NFE4Q86UQ8 179 aa17■□□□□ 0.31
CYLD-208ENST00000564634 TRGC1P0CF51 173 aa16.99■□□□□ 0.31
CYLD-208ENST00000564634 NTF3P20783 257 aa16.99■□□□□ 0.31
CYLD-208ENST00000564634 KRTAP10-1P60331 282 aa16.99■□□□□ 0.31
CYLD-208ENST00000564634 UBE2D3P61077 147 aa16.99■□□□□ 0.31
CYLD-208ENST00000564634 UBE2D2P62837 147 aa16.99■□□□□ 0.31
CYLD-208ENST00000564634 NEXN-AS1Q8NBZ9 246 aa16.99■□□□□ 0.31
CYLD-208ENST00000564634 PEA15Q15121 130 aa16.98■□□□□ 0.31
CYLD-208ENST00000564634 LINC01551Q86U37 167 aa16.98■□□□□ 0.31
CYLD-208ENST00000564634 A8MWL6 223 aa16.97■□□□□ 0.31
CYLD-208ENST00000564634 FAM74A3Q4VXF1 159 aa16.97■□□□□ 0.31
CYLD-208ENST00000564634 CNFNQ9BYD5 112 aa16.97■□□□□ 0.31
CYLD-208ENST00000564634 SMDT1Q9H4I9 107 aa16.97■□□□□ 0.31
CYLD-208ENST00000564634 CT83Q5H943 113 aa16.96■□□□□ 0.31
CYLD-208ENST00000564634 A0A087WTM6 91 aa16.95■□□□□ 0.3
CYLD-208ENST00000564634 SMR3BP02814 79 aaPredicted RBP16.95■□□□□ 0.3
CYLD-208ENST00000564634 MGPP08493 103 aa16.95■□□□□ 0.3
CYLD-208ENST00000564634 GTSF1Q8WW33 167 aa16.95■□□□□ 0.3
CYLD-208ENST00000564634 FLG2Q5D862 2391 aaPredicted RBP16.94■□□□□ 0.3
CYLD-208ENST00000564634 IGHV3-30P01768 117 aa16.94■□□□□ 0.3
CYLD-208ENST00000564634 IGHV3-33P01772 117 aa16.94■□□□□ 0.3
CYLD-208ENST00000564634 IGHV3-30-3P0DP02 117 aa16.94■□□□□ 0.3
CYLD-208ENST00000564634 IGHV3-30-5P0DP03 117 aa16.94■□□□□ 0.3
CYLD-208ENST00000564634 TWIST1Q15672 202 aa16.94■□□□□ 0.3
CYLD-208ENST00000564634 TMEM241Q24JQ0 296 aa16.94■□□□□ 0.3
CYLD-208ENST00000564634 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.94■□□□□ 0.3
CYLD-208ENST00000564634 DPH3P1Q9H4G8 78 aa16.94■□□□□ 0.3
CYLD-208ENST00000564634 SRRM2Q9UQ35 2752 aaKnown RBP16.93■□□□□ 0.3
CYLD-208ENST00000564634 IBA57-AS1B1ANH7 110 aa16.93■□□□□ 0.3
CYLD-208ENST00000564634 C9JQL5 133 aa16.93■□□□□ 0.3
CYLD-208ENST00000564634 H7C1H1 209 aa16.93■□□□□ 0.3
CYLD-208ENST00000564634 HAMPP81172 84 aa16.93■□□□□ 0.3
CYLD-208ENST00000564634 SRSF3P84103 164 aaKnown RBP16.93■□□□□ 0.3
CYLD-208ENST00000564634 OSTCQ9NRP0 149 aa16.93■□□□□ 0.3
CYLD-208ENST00000564634 FOXA3P55318 350 aaPredicted RBP16.92■□□□□ 0.3
CYLD-208ENST00000564634 M0QY20 66 aa16.91■□□□□ 0.3
CYLD-208ENST00000564634 SUMO4Q6EEV6 95 aa16.9■□□□□ 0.3
CYLD-208ENST00000564634 C15orf54Q8N8G6 183 aa16.9■□□□□ 0.3
CYLD-208ENST00000564634 DNAJC30Q96LL9 226 aa16.9■□□□□ 0.3
CYLD-208ENST00000564634 DAZ4Q86SG3 579 aaKnown RBP16.89■□□□□ 0.29
CYLD-208ENST00000564634 TSKUQ8WUA8 353 aa16.89■□□□□ 0.29
CYLD-208ENST00000564634 PGLYRP4Q96LB8 373 aa16.89■□□□□ 0.29
CYLD-208ENST00000564634 GFRA4Q9GZZ7 299 aa16.89■□□□□ 0.29
CYLD-208ENST00000564634 DAZ3Q9NR90 486 aaKnown RBP16.89■□□□□ 0.29
CYLD-208ENST00000564634 NAT8Q9UHE5 227 aa16.89■□□□□ 0.29
CYLD-208ENST00000564634 FAM231BA6NCW3 169 aa16.88■□□□□ 0.29
CYLD-208ENST00000564634 RAB14P61106 215 aa16.88■□□□□ 0.29
CYLD-208ENST00000564634 RPL23P62829 140 aaKnown RBP16.88■□□□□ 0.29
CYLD-208ENST00000564634 LAGE3Q14657 143 aa16.88■□□□□ 0.29
CYLD-208ENST00000564634 TMEM97Q5BJF2 176 aa16.88■□□□□ 0.29
CYLD-208ENST00000564634 SMIM15Q7Z3B0 74 aa16.88■□□□□ 0.29
CYLD-208ENST00000564634 NIT1Q86X76 327 aa16.88■□□□□ 0.29
CYLD-208ENST00000564634 ISOC2Q96AB3 205 aa16.88■□□□□ 0.29
CYLD-208ENST00000564634 TRBV6-8A0A0A6YYG3 113 aa16.87■□□□□ 0.29
CYLD-208ENST00000564634 RASL11AQ6T310 242 aa16.87■□□□□ 0.29
CYLD-208ENST00000564634 URGCP-MRPS24S4R325 110 aa16.87■□□□□ 0.29
CYLD-208ENST00000564634 GCSHP23434 173 aa16.86■□□□□ 0.29
CYLD-208ENST00000564634 Q8N3U1 123 aa16.86■□□□□ 0.29
CYLD-208ENST00000564634 BORCS7Q96B45 105 aa16.86■□□□□ 0.29
CYLD-208ENST00000564634 ADIRFQ15847 76 aa16.85■□□□□ 0.29
CYLD-208ENST00000564634 CHCHD7Q9BUK0 85 aa16.85■□□□□ 0.29
CYLD-208ENST00000564634 V9GYV3 84 aa16.85■□□□□ 0.29
CYLD-208ENST00000564634 HIGD1CA8MV81 97 aa16.84■□□□□ 0.29
CYLD-208ENST00000564634 KCNIP4Q6PIL6 250 aa16.84■□□□□ 0.29
CYLD-208ENST00000564634 NIT2Q9NQR4 276 aa16.84■□□□□ 0.29
CYLD-208ENST00000564634 Q9HAA7 133 aa16.83■□□□□ 0.28
CYLD-208ENST00000564634 A0A087WX48 190 aa16.82■□□□□ 0.28
CYLD-208ENST00000564634 TRAV8-3A0A0A6YYJ7 113 aa16.82■□□□□ 0.28
CYLD-208ENST00000564634 A0A1B0GUT8 65 aa16.82■□□□□ 0.28
CYLD-208ENST00000564634 FAM229AH3BQW9 127 aa16.82■□□□□ 0.28
CYLD-208ENST00000564634 PSCAO43653 123 aa16.81■□□□□ 0.28
CYLD-208ENST00000564634 NTM-AS1Q6ZSK4 140 aa16.81■□□□□ 0.28
CYLD-208ENST00000564634 TMEM262E9PQX1 116 aa16.8■□□□□ 0.28
CYLD-208ENST00000564634 ELOBQ15370 118 aa16.8■□□□□ 0.28
CYLD-208ENST00000564634 GATD1Q8NB37 220 aa16.8■□□□□ 0.28
CYLD-208ENST00000564634 PKIAP61925 76 aa16.79■□□□□ 0.28
CYLD-208ENST00000564634 TM2D2Q9BX73 214 aa16.79■□□□□ 0.28
CYLD-208ENST00000564634 J3QL48 77 aa16.78■□□□□ 0.28
CYLD-208ENST00000564634 CHCHD5Q9BSY4 110 aa16.78■□□□□ 0.28
CYLD-208ENST00000564634 KLK12Q9UKR0 248 aa16.78■□□□□ 0.28
CYLD-208ENST00000564634 TRBV25-1A0A075B6N4 114 aa16.77■□□□□ 0.28
CYLD-208ENST00000564634 IGLV5-52A0A0A0MRZ9 124 aa16.77■□□□□ 0.28
CYLD-208ENST00000564634 CLLU1Q5K131 121 aa16.77■□□□□ 0.28
CYLD-208ENST00000564634 NUP35Q8NFH5 326 aa16.77■□□□□ 0.28
CYLD-208ENST00000564634 NAT8BQ9UHF3 227 aa16.77■□□□□ 0.28
CYLD-208ENST00000564634 TRAV26-2A0A0B4J265 109 aa16.76■□□□□ 0.27
CYLD-208ENST00000564634 RIGQ13278 110 aa16.76■□□□□ 0.27
CYLD-208ENST00000564634 IQCJQ1A5X6 159 aa16.76■□□□□ 0.27
CYLD-208ENST00000564634 TMEM191AQ9H0A3 160 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms