RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 URGCP-MRPS24S4R325 110 aa9.43□□□□□ -0.9
VPS33B-206ENST00000557358 GZMBP10144 247 aa9.42□□□□□ -0.9
VPS33B-206ENST00000557358 SSTP61278 116 aa9.42□□□□□ -0.9
VPS33B-206ENST00000557358 LINC01556Q5JQF7 62 aa9.42□□□□□ -0.9
VPS33B-206ENST00000557358 UFSP1Q6NVU6 142 aa9.42□□□□□ -0.9
VPS33B-206ENST00000557358 ATRAIDQ6UW56 229 aa9.42□□□□□ -0.9
VPS33B-206ENST00000557358 TSKUQ8WUA8 353 aa9.42□□□□□ -0.9
VPS33B-206ENST00000557358 KRTAP1-5Q9BYS1 174 aa9.42□□□□□ -0.9
VPS33B-206ENST00000557358 GFRA4Q9GZZ7 299 aa9.42□□□□□ -0.9
VPS33B-206ENST00000557358 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
VPS33B-206ENST00000557358 Q6ZSN1 163 aa9.41□□□□□ -0.9
VPS33B-206ENST00000557358 C14orf178Q8N769 122 aaPredicted RBP9.41□□□□□ -0.9
VPS33B-206ENST00000557358 TMEM242Q9NWH2 141 aa9.41□□□□□ -0.9
VPS33B-206ENST00000557358 TRBV7-3A0A075B6L6 115 aa9.4□□□□□ -0.9
VPS33B-206ENST00000557358 MUC21A0A0G2JKD1 596 aa9.4□□□□□ -0.9
VPS33B-206ENST00000557358 MUC21A0A140T8X8 626 aa9.4□□□□□ -0.9
VPS33B-206ENST00000557358 SMIM27A0A1W2PRY6 76 aa9.4□□□□□ -0.9
VPS33B-206ENST00000557358 FAM231BA6NCW3 169 aa9.4□□□□□ -0.9
VPS33B-206ENST00000557358 H7C1H1 209 aa9.4□□□□□ -0.9
VPS33B-206ENST00000557358 PSCAO43653 123 aa9.4□□□□□ -0.9
VPS33B-206ENST00000557358 IGLC6P0CF74 106 aa9.4□□□□□ -0.9
VPS33B-206ENST00000557358 ZNF575Q86XF7 245 aa9.4□□□□□ -0.9
VPS33B-206ENST00000557358 C16orf90A8MZG2 172 aa9.39□□□□□ -0.91
VPS33B-206ENST00000557358 SMIM15Q7Z3B0 74 aa9.39□□□□□ -0.91
VPS33B-206ENST00000557358 GTSF1Q8WW33 167 aa9.39□□□□□ -0.91
VPS33B-206ENST00000557358 IMMP2LQ96T52 175 aa9.39□□□□□ -0.91
VPS33B-206ENST00000557358 NAT8BQ9UHF3 227 aa9.39□□□□□ -0.91
VPS33B-206ENST00000557358 HIGD1CA8MV81 97 aa9.38□□□□□ -0.91
VPS33B-206ENST00000557358 IGHV3-30P01768 117 aa9.38□□□□□ -0.91
VPS33B-206ENST00000557358 IGHV3-33P01772 117 aa9.38□□□□□ -0.91
VPS33B-206ENST00000557358 MGPP08493 103 aa9.38□□□□□ -0.91
VPS33B-206ENST00000557358 IGHV3-30-3P0DP02 117 aa9.38□□□□□ -0.91
VPS33B-206ENST00000557358 IGHV3-30-5P0DP03 117 aa9.38□□□□□ -0.91
VPS33B-206ENST00000557358 S100PP25815 95 aa9.38□□□□□ -0.91
VPS33B-206ENST00000557358 CTRLP40313 264 aa9.38□□□□□ -0.91
VPS33B-206ENST00000557358 TMEM97Q5BJF2 176 aa9.38□□□□□ -0.91
VPS33B-206ENST00000557358 LINC00694P0DN24 101 aa9.37□□□□□ -0.91
VPS33B-206ENST00000557358 FOXA3P55318 350 aaPredicted RBP9.37□□□□□ -0.91
VPS33B-206ENST00000557358 PKIAP61925 76 aa9.37□□□□□ -0.91
VPS33B-206ENST00000557358 WDR73Q6P4I2 378 aa9.37□□□□□ -0.91
VPS33B-206ENST00000557358 LYZL1Q6UWQ5 148 aa9.37□□□□□ -0.91
VPS33B-206ENST00000557358 NUP35Q8NFH5 326 aa9.37□□□□□ -0.91
VPS33B-206ENST00000557358 BORCS7Q96B45 105 aa9.37□□□□□ -0.91
VPS33B-206ENST00000557358 PGLYRP4Q96LB8 373 aa9.37□□□□□ -0.91
VPS33B-206ENST00000557358 TNFRSF18Q9Y5U5 241 aa9.37□□□□□ -0.91
VPS33B-206ENST00000557358 DNAH2Q9P225 4427 aa9.36□□□□□ -0.91
VPS33B-206ENST00000557358 A0A087WX48 190 aa9.36□□□□□ -0.91
VPS33B-206ENST00000557358 LAGE3Q14657 143 aa9.36□□□□□ -0.91
VPS33B-206ENST00000557358 ELOBQ15370 118 aa9.36□□□□□ -0.91
VPS33B-206ENST00000557358 SPATA12Q7Z6I5 190 aa9.36□□□□□ -0.91
VPS33B-206ENST00000557358 CBLN2Q8IUK8 224 aa9.36□□□□□ -0.91
VPS33B-206ENST00000557358 TM2D2Q9BX73 214 aa9.36□□□□□ -0.91
VPS33B-206ENST00000557358 SMCO4Q9NRQ5 59 aa9.36□□□□□ -0.91
VPS33B-206ENST00000557358 DNAH17Q9UFH2 4485 aa9.36□□□□□ -0.91
VPS33B-206ENST00000557358 HECTD4Q9Y4D8 3996 aa9.36□□□□□ -0.91
VPS33B-206ENST00000557358 TRAV9-1A0A075B6T8 112 aa9.35□□□□□ -0.91
VPS33B-206ENST00000557358 TRAV8-3A0A0A6YYJ7 113 aa9.35□□□□□ -0.91
VPS33B-206ENST00000557358 IBA57-AS1B1ANH7 110 aa9.35□□□□□ -0.91
VPS33B-206ENST00000557358 UBE2D3P61077 147 aa9.35□□□□□ -0.91
VPS33B-206ENST00000557358 UBE2D2P62837 147 aa9.35□□□□□ -0.91
VPS33B-206ENST00000557358 TWIST1Q15672 202 aa9.35□□□□□ -0.91
VPS33B-206ENST00000557358 DAZ4Q86SG3 579 aaKnown RBP9.35□□□□□ -0.91
VPS33B-206ENST00000557358 RMI2Q96E14 147 aa9.35□□□□□ -0.91
VPS33B-206ENST00000557358 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
VPS33B-206ENST00000557358 DPH3P1Q9H4G8 78 aa9.35□□□□□ -0.91
VPS33B-206ENST00000557358 Q9HAA7 133 aa9.35□□□□□ -0.91
VPS33B-206ENST00000557358 DAZ3Q9NR90 486 aaKnown RBP9.35□□□□□ -0.91
VPS33B-206ENST00000557358 A0A1B0GUT8 65 aa9.34□□□□□ -0.91
VPS33B-206ENST00000557358 TMEM262E9PQX1 116 aa9.34□□□□□ -0.91
VPS33B-206ENST00000557358 SCO1O75880 301 aa9.34□□□□□ -0.91
VPS33B-206ENST00000557358 NTF3P20783 257 aa9.34□□□□□ -0.91
VPS33B-206ENST00000557358 Q6ZRN7 208 aaPredicted RBP9.34□□□□□ -0.91
VPS33B-206ENST00000557358 NEXN-AS1Q8NBZ9 246 aa9.34□□□□□ -0.91
VPS33B-206ENST00000557358 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
VPS33B-206ENST00000557358 CNFNQ9BYD5 112 aa9.34□□□□□ -0.91
VPS33B-206ENST00000557358 PGPEP1Q9NXJ5 209 aa9.34□□□□□ -0.91
VPS33B-206ENST00000557358 COX11Q9Y6N1 276 aa9.34□□□□□ -0.91
VPS33B-206ENST00000557358 RIGQ13278 110 aa9.33□□□□□ -0.92
VPS33B-206ENST00000557358 ATP5L2Q7Z4Y8 100 aa9.33□□□□□ -0.92
VPS33B-206ENST00000557358 BTF3L4Q96K17 158 aa9.33□□□□□ -0.92
VPS33B-206ENST00000557358 Q9UF83 564 aa9.33□□□□□ -0.92
VPS33B-206ENST00000557358 FAT2Q9NYQ8 4349 aa9.33□□□□□ -0.92
VPS33B-206ENST00000557358 CDPF1Q6NVV7 123 aa9.32□□□□□ -0.92
VPS33B-206ENST00000557358 MRPL54Q6P161 138 aaKnown RBP9.32□□□□□ -0.92
VPS33B-206ENST00000557358 TRBV6-8A0A0A6YYG3 113 aa9.31□□□□□ -0.92
VPS33B-206ENST00000557358 A0A1B0GW15 77 aa9.31□□□□□ -0.92
VPS33B-206ENST00000557358 HBBP68871 147 aa9.31□□□□□ -0.92
VPS33B-206ENST00000557358 RASL11AQ6T310 242 aa9.31□□□□□ -0.92
VPS33B-206ENST00000557358 NIT1Q86X76 327 aa9.31□□□□□ -0.92
VPS33B-206ENST00000557358 YPEL4Q96NS1 127 aa9.31□□□□□ -0.92
VPS33B-206ENST00000557358 CHCHD5Q9BSY4 110 aa9.31□□□□□ -0.92
VPS33B-206ENST00000557358 KIF25-AS1Q9Y6Z4 181 aa9.31□□□□□ -0.92
VPS33B-206ENST00000557358 TRBV24-1A0A075B6N3 115 aa9.3□□□□□ -0.92
VPS33B-206ENST00000557358 TRBV25-1A0A075B6N4 114 aa9.3□□□□□ -0.92
VPS33B-206ENST00000557358 A0A087WTM6 91 aa9.3□□□□□ -0.92
VPS33B-206ENST00000557358 TGIF2-C20orf24A0A0A6YYL0 155 aa9.3□□□□□ -0.92
VPS33B-206ENST00000557358 A0A1B0GXF2 115 aa9.3□□□□□ -0.92
VPS33B-206ENST00000557358 S100A8P05109 93 aa9.3□□□□□ -0.92
VPS33B-206ENST00000557358 Q0VG73 95 aa9.3□□□□□ -0.92
VPS33B-206ENST00000557358 SUMO4Q6EEV6 95 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms