RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 ELOF1P60002 83 aaKnown RBP0.3□□□□□ -2.36
USP44-207ENST00000552237 ALX1Q15699 326 aa0.3□□□□□ -2.36
USP44-207ENST00000552237 ZNF818PQ6ZRF7 136 aa0.3□□□□□ -2.36
USP44-207ENST00000552237 Q6ZUT4 128 aa0.3□□□□□ -2.36
USP44-207ENST00000552237 BAGE3Q86Y29 109 aa0.3□□□□□ -2.36
USP44-207ENST00000552237 ARL11Q969Q4 196 aa0.3□□□□□ -2.36
USP44-207ENST00000552237 FAM103A1Q9BTL3 118 aaKnown RBP0.3□□□□□ -2.36
USP44-207ENST00000552237 PDCD10Q9BUL8 212 aa0.3□□□□□ -2.36
USP44-207ENST00000552237 NDUFA12Q9UI09 145 aa0.3□□□□□ -2.36
USP44-207ENST00000552237 LSM2Q9Y333 95 aaKnown RBP0.3□□□□□ -2.36
USP44-207ENST00000552237 TTC28Q96AY4 2481 aa0.3□□□□□ -2.36
USP44-207ENST00000552237 LRRC37A3O60309 1634 aa0.3□□□□□ -2.36
USP44-207ENST00000552237 IGSF10Q6WRI0 2623 aa0.3□□□□□ -2.36
USP44-207ENST00000552237 LAMB1P07942 1786 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 ERCC6Q03468 1493 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 ARAP1Q96P48 1450 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 A0A096LNT2 108 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 IFNGP01579 166 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 APOC3P02656 99 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 TSPAN19P0C672 248 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 EDDM3BP56851 147 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 RPS25P62851 125 aaKnown RBP0.29□□□□□ -2.36
USP44-207ENST00000552237 S100A12P80511 92 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 EMX2Q04743 252 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 COX17Q14061 63 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 Q5BKY6 102 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 C9orf116Q5BN46 136 aaPredicted RBP0.29□□□□□ -2.36
USP44-207ENST00000552237 SPTSSBQ8NFR3 76 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 PPP3R2Q96LZ3 170 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 SPANXDQ9BXN6 97 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 PROK2Q9HC23 129 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 SPCS1Q9Y6A9 102 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 BDP1A6H8Y1 2624 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 GOLGA4Q13439 2230 aaKnown RBP0.29□□□□□ -2.36
USP44-207ENST00000552237 ZNF609O15014 1411 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 SOGA1O94964 1423 aa0.29□□□□□ -2.36
USP44-207ENST00000552237 NCOR2Q9Y618 2525 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 WDR97A6NE52 1622 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 ANKRD17O75179 2603 aaKnown RBP0.28□□□□□ -2.36
USP44-207ENST00000552237 TRAV1-2A0A0B4J238 106 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 ARPC5O15511 151 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 TFF1P04155 84 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 NMBP08949 121 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 SELENOWP63302 87 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 CCL8P80075 99 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 SARNPP82979 210 aaKnown RBP0.28□□□□□ -2.36
USP44-207ENST00000552237 INSL4Q14641 139 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 S100A7L2Q5SY68 101 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 MIC13Q5XKP0 118 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 MYOZ3Q8TDC0 251 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 C1orf54Q8WWF1 131 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 SMR3AQ99954 134 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 NAA60Q9H7X0 242 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 CPDO75976 1380 aa0.28□□□□□ -2.36
USP44-207ENST00000552237 KTN1Q86UP2 1357 aaKnown RBP0.28□□□□□ -2.36
USP44-207ENST00000552237 ZNF518AQ6AHZ1 1483 aa0.28□□□□□ -2.37
USP44-207ENST00000552237 SPTBN1Q01082 2364 aaKnown RBP0.27□□□□□ -2.37
USP44-207ENST00000552237 DMBT1Q9UGM3 2413 aaPredicted RBP0.27□□□□□ -2.37
USP44-207ENST00000552237 MACF1Q9UPN3 7388 aaKnown RBP0.27□□□□□ -2.37
USP44-207ENST00000552237 SBF2Q86WG5 1849 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 MAST4O15021 2626 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 TRAV13-2A0A0B4J235 113 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 TRAV22A0A0B4J277 110 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 CTXND1A0A1B0GTU2 59 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 FAM236AA0A1B0GUQ0 79 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 FAM236BA0A1B0GV22 79 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 LOC285095A0A1B0GVY8 99 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 C10orf142B7Z368 130 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 PPP1R17O96001 155 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 LINC00694P0DN24 101 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 UBE2G1P62253 170 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 DCDP81605 110 aaKnown RBP0.27□□□□□ -2.37
USP44-207ENST00000552237 C10orf128Q5T292 105 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 Q6ZRX8 168 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 FAM107BQ9H098 131 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 FAIMQ9NVQ4 179 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 PRG4Q92954 1404 aaPredicted RBP0.27□□□□□ -2.37
USP44-207ENST00000552237 FAM208BQ5VWN6 2430 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 SIPA1L3O60292 1781 aaPredicted RBP0.27□□□□□ -2.37
USP44-207ENST00000552237 PATJQ8NI35 1801 aa0.27□□□□□ -2.37
USP44-207ENST00000552237 AKAP6Q13023 2319 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 PTPN13Q12923 2485 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 TRGV1A0A0A0MS02 117 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 M0R129 80 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 APOC2P02655 101 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 TPPP2P59282 170 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 CFAP126Q5VTH2 177 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 C8orf59Q8N0T1 100 aaPredicted RBP0.26□□□□□ -2.37
USP44-207ENST00000552237 TTC9CQ8N5M4 171 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 CNFNQ9BYD5 112 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 SCN3BQ9NY72 215 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 UQCR10Q9UDW1 63 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 PRO0255Q9UI72 69 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 V9GYH0 126 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 MYOM3Q5VTT5 1437 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 GRIN2AQ12879 1464 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 SYNJ1O43426 1573 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 MYO7BQ6PIF6 2116 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 C2CD3Q4AC94 2353 aa0.26□□□□□ -2.37
USP44-207ENST00000552237 KDM3BQ7LBC6 1761 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms