RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 MLH3Q9UHC1 1453 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 LOC285556D6RIA3 1793 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 MYOFQ9NZM1 2061 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 A0A0J9YY99 117 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 TEX49A0A1B0GTD5 131 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 APOC3P02656 99 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 UBE2D1P51668 147 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 ZNF818PQ6ZRF7 136 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 SERP2Q8N6R1 65 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 TRGV9Q99603 122 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 WFDC10AQ9H1F0 79 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 MED9Q9NWA0 146 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 CACFD1Q9UGQ2 172 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 CR1P17927 2039 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 CCDC88BA6NC98 1476 aa2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 PPRC1Q5VV67 1664 aaKnown RBP2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 SYS1-DBNDD2H3BUS1 97 aa2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 NDUFC1O43677 76 aa2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 IGLV3-1P01715 115 aa2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 KRTAP10-9P60411 292 aa2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 COA5Q86WW8 74 aa2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 LINC00304Q8N9R0 145 aa2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 KRTAP2-2Q9BYT5 123 aa2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 UQCR10Q9UDW1 63 aa2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 PRRC2AP48634 2157 aaKnown RBP2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 DLG5Q8TDM6 1919 aa2.07□□□□□ -2.08
RNU4-60P-201ENST00000517239 ADAMTS12P58397 1594 aa2.06□□□□□ -2.08
RNU4-60P-201ENST00000517239 ZC3H13Q5T200 1668 aaKnown RBP2.06□□□□□ -2.08
RNU4-60P-201ENST00000517239 PDCD11Q14690 1871 aaKnown RBP2.06□□□□□ -2.08
RNU4-60P-201ENST00000517239 TRBV7-3A0A075B6L6 115 aa2.06□□□□□ -2.08
RNU4-60P-201ENST00000517239 TRBV6-5A0A0K0K1A5 114 aa2.06□□□□□ -2.08
RNU4-60P-201ENST00000517239 IGLC7A0M8Q6 106 aa2.06□□□□□ -2.08
RNU4-60P-201ENST00000517239 IGLV3-19P01714 112 aa2.06□□□□□ -2.08
RNU4-60P-201ENST00000517239 NXT2Q9NPJ8 142 aaKnown RBP2.06□□□□□ -2.08
RNU4-60P-201ENST00000517239 PLIN4Q96Q06 1357 aa2.06□□□□□ -2.08
RNU4-60P-201ENST00000517239 A0A0G2JND7 137 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 IGHV3-30P01768 117 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 IGHV3-30-5P0DP03 117 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 PDE6GP18545 87 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 RPL37AP61513 92 aaKnown RBP2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 HCP5Q6MZN7 132 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 CYSTM1Q9H1C7 97 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 TMEM14CQ9P0S9 112 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 PRO1854Q9UHT4 67 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 EDC4Q6P2E9 1401 aaKnown RBP2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 ATP10BO94823 1461 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 CDK13Q14004 1512 aaKnown RBP2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 LRRC37A3O60309 1634 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 PHRF1Q9P1Y6 1649 aaKnown RBP2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 SCN7AQ01118 1682 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 LTN1O94822 1766 aa2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 AFDNP55196 1824 aaKnown RBP2.05□□□□□ -2.08
RNU4-60P-201ENST00000517239 HIGD1CA8MV81 97 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 CHKB-CPT1BH3BT56 60 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 UNC13BO14795 1591 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 FANCAO15360 1455 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 IL9P15248 144 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 COL5A3P25940 1745 aaPredicted RBP2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 EDDM3BP56851 147 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 UBE2D3P61077 147 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 UBE2D2P62837 147 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 ADIRFQ15847 76 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 SFTA2Q6UW10 78 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 C20orf197Q8N268 126 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 Q8N6K4 173 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 UNC13CQ8NB66 2214 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 SHROOM3Q8TF72 1996 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 FAM167A-AS1Q96KT0 104 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 AMELYQ99218 206 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 SPCS1Q9Y6A9 102 aa2.04□□□□□ -2.08
RNU4-60P-201ENST00000517239 ESPL1Q14674 2120 aa2.03□□□□□ -2.08
RNU4-60P-201ENST00000517239 LAMA4Q16363 1823 aa2.03□□□□□ -2.08
RNU4-60P-201ENST00000517239 TNRC6BQ9UPQ9 1833 aaKnown RBP2.03□□□□□ -2.08
RNU4-60P-201ENST00000517239 NLRP1Q9C000 1473 aa2.03□□□□□ -2.08
RNU4-60P-201ENST00000517239 CLIP1P30622 1438 aa2.03□□□□□ -2.08
RNU4-60P-201ENST00000517239 LOC101927531A0A1B0GV80 90 aa2.03□□□□□ -2.08
RNU4-60P-201ENST00000517239 SMIM31A0A1B0GVY4 71 aa2.03□□□□□ -2.08
RNU4-60P-201ENST00000517239 SSBP1Q04837 148 aaKnown RBP2.03□□□□□ -2.08
RNU4-60P-201ENST00000517239 ZNF56Q15929 161 aa2.03□□□□□ -2.08
RNU4-60P-201ENST00000517239 RABAC1Q9UI14 185 aa2.03□□□□□ -2.08
RNU4-60P-201ENST00000517239 MYOM1P52179 1685 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 COL4A6Q14031 1691 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 KIF21AQ7Z4S6 1674 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 POLA1P09884 1462 aaPredicted RBP2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 IGLV3-32A0A0A0MS00 114 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 TRBV6-7A0A0A0MS04 114 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 TRAV22A0A0B4J277 110 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 CLPSL1A2RUU4 121 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 IGKV1-17P01599 117 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 COX6CP09669 75 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 KRTAP10-12P60413 245 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 LCE3CQ5T5A8 94 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 Q5VV11 94 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 ST20Q9HBF5 79 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 IQGAP3Q86VI3 1631 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 ARHGEF5Q12774 1597 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 DIP2CQ9Y2E4 1556 aa2.02□□□□□ -2.09
RNU4-60P-201ENST00000517239 BAZ2BQ9UIF8 2168 aaKnown RBP2.01□□□□□ -2.09
RNU4-60P-201ENST00000517239 MYO5CQ9NQX4 1742 aa2.01□□□□□ -2.09
RNU4-60P-201ENST00000517239 SPTBP11277 2137 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms