RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 NFE4Q86UQ8 179 aa8.4□□□□□ -1.06
MRPL55-233ENST00000495899 C10orf126Q8N4M7 172 aa8.4□□□□□ -1.06
MRPL55-233ENST00000495899 OR10G8Q8NGN5 311 aa8.4□□□□□ -1.06
MRPL55-233ENST00000495899 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
MRPL55-233ENST00000495899 TPPP3Q9BW30 176 aa8.4□□□□□ -1.06
MRPL55-233ENST00000495899 SMDT1Q9H4I9 107 aa8.4□□□□□ -1.06
MRPL55-233ENST00000495899 RPP21Q9H633 154 aaKnown RBP8.4□□□□□ -1.06
MRPL55-233ENST00000495899 Q9UF83 564 aa8.4□□□□□ -1.06
MRPL55-233ENST00000495899 PLA2G2DQ9UNK4 145 aa8.4□□□□□ -1.06
MRPL55-233ENST00000495899 KIF25-AS1Q9Y6Z4 181 aa8.4□□□□□ -1.06
MRPL55-233ENST00000495899 TRBV7-3A0A075B6L6 115 aa8.39□□□□□ -1.07
MRPL55-233ENST00000495899 SRP19P09132 144 aaKnown RBP8.39□□□□□ -1.07
MRPL55-233ENST00000495899 CEBPGP53567 150 aa8.39□□□□□ -1.07
MRPL55-233ENST00000495899 LINC00315P59091 139 aa8.39□□□□□ -1.07
MRPL55-233ENST00000495899 SSTP61278 116 aa8.39□□□□□ -1.07
MRPL55-233ENST00000495899 RPL36AP83881 106 aaKnown RBP8.39□□□□□ -1.07
MRPL55-233ENST00000495899 RPL36ALQ969Q0 106 aaKnown RBP8.39□□□□□ -1.07
MRPL55-233ENST00000495899 SMIM7Q9BQ49 75 aa8.39□□□□□ -1.07
MRPL55-233ENST00000495899 RNASE7Q9H1E1 156 aaKnown RBP8.39□□□□□ -1.07
MRPL55-233ENST00000495899 TMEM218A2RU14 115 aa8.38□□□□□ -1.07
MRPL55-233ENST00000495899 ZNF727A8MUV8 499 aa8.38□□□□□ -1.07
MRPL55-233ENST00000495899 F5H697 171 aa8.38□□□□□ -1.07
MRPL55-233ENST00000495899 CTRLP40313 264 aa8.38□□□□□ -1.07
MRPL55-233ENST00000495899 ZNF56Q15929 161 aa8.38□□□□□ -1.07
MRPL55-233ENST00000495899 FAM74A3Q4VXF1 159 aa8.38□□□□□ -1.07
MRPL55-233ENST00000495899 LYZL1Q6UWQ5 148 aa8.38□□□□□ -1.07
MRPL55-233ENST00000495899 CNFNQ9BYD5 112 aa8.38□□□□□ -1.07
MRPL55-233ENST00000495899 MSRB1Q9NZV6 116 aa8.38□□□□□ -1.07
MRPL55-233ENST00000495899 HECTD4Q9Y4D8 3996 aa8.37□□□□□ -1.07
MRPL55-233ENST00000495899 LOC100996750A0A140TA64 210 aa8.37□□□□□ -1.07
MRPL55-233ENST00000495899 TRGC1P0CF51 173 aa8.37□□□□□ -1.07
MRPL55-233ENST00000495899 NTF3P20783 257 aa8.37□□□□□ -1.07
MRPL55-233ENST00000495899 UBE2D3P61077 147 aa8.37□□□□□ -1.07
MRPL55-233ENST00000495899 UBE2D2P62837 147 aa8.37□□□□□ -1.07
MRPL55-233ENST00000495899 Q6ZRN7 208 aaPredicted RBP8.37□□□□□ -1.07
MRPL55-233ENST00000495899 LINC01551Q86U37 167 aa8.37□□□□□ -1.07
MRPL55-233ENST00000495899 KRTAP4-6Q9BYQ5 205 aa8.37□□□□□ -1.07
MRPL55-233ENST00000495899 A8MWL6 223 aa8.36□□□□□ -1.07
MRPL55-233ENST00000495899 H7C1H1 209 aa8.36□□□□□ -1.07
MRPL55-233ENST00000495899 GATCO43716 136 aaKnown RBP8.36□□□□□ -1.07
MRPL55-233ENST00000495899 FOXA3P55318 350 aaPredicted RBP8.36□□□□□ -1.07
MRPL55-233ENST00000495899 ERVFC1-1P60608 527 aa8.36□□□□□ -1.07
MRPL55-233ENST00000495899 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.36□□□□□ -1.07
MRPL55-233ENST00000495899 DNAH17Q9UFH2 4485 aa8.36□□□□□ -1.07
MRPL55-233ENST00000495899 FAT2Q9NYQ8 4349 aa8.36□□□□□ -1.07
MRPL55-233ENST00000495899 IBA57-AS1B1ANH7 110 aa8.35□□□□□ -1.07
MRPL55-233ENST00000495899 TMEM241Q24JQ0 296 aa8.35□□□□□ -1.07
MRPL55-233ENST00000495899 C10orf91Q5T1B1 145 aa8.35□□□□□ -1.07
MRPL55-233ENST00000495899 NEXN-AS1Q8NBZ9 246 aa8.35□□□□□ -1.07
MRPL55-233ENST00000495899 GTSF1Q8WW33 167 aa8.35□□□□□ -1.07
MRPL55-233ENST00000495899 DNAJC30Q96LL9 226 aa8.35□□□□□ -1.07
MRPL55-233ENST00000495899 SEC11CQ9BY50 192 aa8.35□□□□□ -1.07
MRPL55-233ENST00000495899 FAM231BA6NCW3 169 aa8.34□□□□□ -1.07
MRPL55-233ENST00000495899 C9JQL5 133 aa8.34□□□□□ -1.07
MRPL55-233ENST00000495899 F8W036 122 aa8.34□□□□□ -1.07
MRPL55-233ENST00000495899 M0QY20 66 aa8.34□□□□□ -1.07
MRPL55-233ENST00000495899 LAGE3Q14657 143 aa8.34□□□□□ -1.07
MRPL55-233ENST00000495899 TWIST1Q15672 202 aa8.34□□□□□ -1.07
MRPL55-233ENST00000495899 TMEM97Q5BJF2 176 aa8.34□□□□□ -1.07
MRPL55-233ENST00000495899 DAZ4Q86SG3 579 aaKnown RBP8.34□□□□□ -1.07
MRPL55-233ENST00000495899 GFRA4Q9GZZ7 299 aa8.34□□□□□ -1.07
MRPL55-233ENST00000495899 DPH3P1Q9H4G8 78 aa8.34□□□□□ -1.07
MRPL55-233ENST00000495899 DAZ3Q9NR90 486 aaKnown RBP8.34□□□□□ -1.07
MRPL55-233ENST00000495899 OSTCQ9NRP0 149 aa8.34□□□□□ -1.07
MRPL55-233ENST00000495899 TNFRSF18Q9Y5U5 241 aa8.34□□□□□ -1.07
MRPL55-233ENST00000495899 TRBV6-8A0A0A6YYG3 113 aa8.33□□□□□ -1.08
MRPL55-233ENST00000495899 IGHV3-30P01768 117 aa8.33□□□□□ -1.08
MRPL55-233ENST00000495899 IGHV3-33P01772 117 aa8.33□□□□□ -1.08
MRPL55-233ENST00000495899 IGHV3-30-3P0DP02 117 aa8.33□□□□□ -1.08
MRPL55-233ENST00000495899 IGHV3-30-5P0DP03 117 aa8.33□□□□□ -1.08
MRPL55-233ENST00000495899 TSKUQ8WUA8 353 aa8.33□□□□□ -1.08
MRPL55-233ENST00000495899 CARHSP1Q9Y2V2 147 aaKnown RBP8.33□□□□□ -1.08
MRPL55-233ENST00000495899 MGPP08493 103 aa8.32□□□□□ -1.08
MRPL55-233ENST00000495899 SUMO4Q6EEV6 95 aa8.32□□□□□ -1.08
MRPL55-233ENST00000495899 SMIM15Q7Z3B0 74 aa8.32□□□□□ -1.08
MRPL55-233ENST00000495899 NIT1Q86X76 327 aa8.32□□□□□ -1.08
MRPL55-233ENST00000495899 C15orf54Q8N8G6 183 aa8.32□□□□□ -1.08
MRPL55-233ENST00000495899 FRZBQ92765 325 aa8.32□□□□□ -1.08
MRPL55-233ENST00000495899 CHCHD7Q9BUK0 85 aa8.32□□□□□ -1.08
MRPL55-233ENST00000495899 NAT8Q9UHE5 227 aa8.32□□□□□ -1.08
MRPL55-233ENST00000495899 URGCP-MRPS24S4R325 110 aa8.32□□□□□ -1.08
MRPL55-233ENST00000495899 PKD1P98161 4303 aa8.31□□□□□ -1.08
MRPL55-233ENST00000495899 APOC3P02656 99 aa8.31□□□□□ -1.08
MRPL55-233ENST00000495899 ADCYAP1P18509 176 aa8.31□□□□□ -1.08
MRPL55-233ENST00000495899 RASL11AQ6T310 242 aa8.31□□□□□ -1.08
MRPL55-233ENST00000495899 ISOC2Q96AB3 205 aa8.31□□□□□ -1.08
MRPL55-233ENST00000495899 BORCS7Q96B45 105 aa8.31□□□□□ -1.08
MRPL55-233ENST00000495899 PGLYRP4Q96LB8 373 aa8.31□□□□□ -1.08
MRPL55-233ENST00000495899 NIT2Q9NQR4 276 aa8.31□□□□□ -1.08
MRPL55-233ENST00000495899 A0A087WX48 190 aa8.3□□□□□ -1.08
MRPL55-233ENST00000495899 TRAV8-3A0A0A6YYJ7 113 aa8.3□□□□□ -1.08
MRPL55-233ENST00000495899 PKIAP61925 76 aa8.3□□□□□ -1.08
MRPL55-233ENST00000495899 RPL23P62829 140 aaKnown RBP8.3□□□□□ -1.08
MRPL55-233ENST00000495899 ELOBQ15370 118 aa8.3□□□□□ -1.08
MRPL55-233ENST00000495899 KCNIP4Q6PIL6 250 aa8.3□□□□□ -1.08
MRPL55-233ENST00000495899 SVBPQ8N300 66 aa8.3□□□□□ -1.08
MRPL55-233ENST00000495899 A0A1B0GUT8 65 aa8.29□□□□□ -1.08
MRPL55-233ENST00000495899 HIGD1CA8MV81 97 aa8.29□□□□□ -1.08
MRPL55-233ENST00000495899 SPATA12Q7Z6I5 190 aa8.29□□□□□ -1.08
MRPL55-233ENST00000495899 TM2D2Q9BX73 214 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms