RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.64□□□□□ -2.31
VPS13A-209ENST00000467124 SMIM11BQ8TCY0 68 aa0.64□□□□□ -2.31
VPS13A-209ENST00000467124 COPS9Q8WXC6 57 aa0.64□□□□□ -2.31
VPS13A-209ENST00000467124 SERP1Q9Y6X1 66 aa0.64□□□□□ -2.31
VPS13A-209ENST00000467124 ROCK2O75116 1388 aaKnown RBP0.64□□□□□ -2.31
VPS13A-209ENST00000467124 ZNF518AQ6AHZ1 1483 aa0.64□□□□□ -2.31
VPS13A-209ENST00000467124 APCP25054 2843 aa0.64□□□□□ -2.31
VPS13A-209ENST00000467124 TENM3Q9P273 2699 aa0.63□□□□□ -2.31
VPS13A-209ENST00000467124 PLXNA1Q9UIW2 1896 aa0.63□□□□□ -2.31
VPS13A-209ENST00000467124 GPR98Q8WXG9 6306 aa0.63□□□□□ -2.31
VPS13A-209ENST00000467124 MIF4GDA9UHW6 222 aaKnown RBP0.63□□□□□ -2.31
VPS13A-209ENST00000467124 HCG22E2RYF7 251 aa0.63□□□□□ -2.31
VPS13A-209ENST00000467124 APOC4-APOC2K7ER74 178 aa0.63□□□□□ -2.31
VPS13A-209ENST00000467124 APODP05090 189 aa0.63□□□□□ -2.31
VPS13A-209ENST00000467124 Q8N8P6 123 aa0.63□□□□□ -2.31
VPS13A-209ENST00000467124 SNRNP25Q9BV90 132 aaKnown RBP0.63□□□□□ -2.31
VPS13A-209ENST00000467124 RERGLQ9H628 205 aa0.63□□□□□ -2.31
VPS13A-209ENST00000467124 CASKIN1Q8WXD9 1431 aa0.63□□□□□ -2.31
VPS13A-209ENST00000467124 MAP2P11137 1827 aaKnown RBP0.62□□□□□ -2.31
VPS13A-209ENST00000467124 MCRIP1C9JLW8 97 aa0.62□□□□□ -2.31
VPS13A-209ENST00000467124 ZNF818PQ6ZRF7 136 aa0.62□□□□□ -2.31
VPS13A-209ENST00000467124 VMO1Q7Z5L0 202 aa0.62□□□□□ -2.31
VPS13A-209ENST00000467124 SMR3AQ99954 134 aa0.62□□□□□ -2.31
VPS13A-209ENST00000467124 PROK2Q9HC23 129 aa0.62□□□□□ -2.31
VPS13A-209ENST00000467124 LAMB1P07942 1786 aa0.62□□□□□ -2.31
VPS13A-209ENST00000467124 DOCK11Q5JSL3 2073 aa0.61□□□□□ -2.31
VPS13A-209ENST00000467124 MBD5Q9P267 1494 aa0.61□□□□□ -2.31
VPS13A-209ENST00000467124 TRAV13-2A0A0B4J235 113 aa0.61□□□□□ -2.31
VPS13A-209ENST00000467124 TRAV1-2A0A0B4J238 106 aa0.61□□□□□ -2.31
VPS13A-209ENST00000467124 NMBP08949 121 aa0.61□□□□□ -2.31
VPS13A-209ENST00000467124 CCL8P80075 99 aa0.61□□□□□ -2.31
VPS13A-209ENST00000467124 Q6ZRX8 168 aa0.61□□□□□ -2.31
VPS13A-209ENST00000467124 SSC5DA1L4H1 1573 aa0.61□□□□□ -2.31
VPS13A-209ENST00000467124 CFTRP13569 1480 aa0.61□□□□□ -2.31
VPS13A-209ENST00000467124 FRAS1Q86XX4 4008 aa0.61□□□□□ -2.31
VPS13A-209ENST00000467124 CACNA1EQ15878 2313 aa0.6□□□□□ -2.31
VPS13A-209ENST00000467124 MYO7AQ13402 2215 aa0.6□□□□□ -2.31
VPS13A-209ENST00000467124 FOCADQ5VW36 1801 aa0.6□□□□□ -2.31
VPS13A-209ENST00000467124 TMEM14DPA8MWL7 114 aa0.6□□□□□ -2.31
VPS13A-209ENST00000467124 GCHFRP30047 84 aa0.6□□□□□ -2.31
VPS13A-209ENST00000467124 C10orf128Q5T292 105 aa0.6□□□□□ -2.31
VPS13A-209ENST00000467124 Q6AWC8 147 aa0.6□□□□□ -2.31
VPS13A-209ENST00000467124 WFDC6Q9BQY6 131 aa0.6□□□□□ -2.31
VPS13A-209ENST00000467124 NAA60Q9H7X0 242 aa0.6□□□□□ -2.31
VPS13A-209ENST00000467124 BDP1A6H8Y1 2624 aa0.6□□□□□ -2.31
VPS13A-209ENST00000467124 CDK13Q14004 1512 aaKnown RBP0.59□□□□□ -2.31
VPS13A-209ENST00000467124 SNAPC5O75971 98 aa0.59□□□□□ -2.31
VPS13A-209ENST00000467124 AKAIN1P0CW23 69 aa0.59□□□□□ -2.31
VPS13A-209ENST00000467124 CATR1Q13166 79 aa0.59□□□□□ -2.31
VPS13A-209ENST00000467124 IFT140Q96RY7 1462 aa0.59□□□□□ -2.32
VPS13A-209ENST00000467124 PARP14Q460N5 1801 aa0.59□□□□□ -2.32
VPS13A-209ENST00000467124 MYH7P12883 1935 aa0.58□□□□□ -2.32
VPS13A-209ENST00000467124 SIX6O95475 246 aa0.58□□□□□ -2.32
VPS13A-209ENST00000467124 PPP1R17O96001 155 aa0.58□□□□□ -2.32
VPS13A-209ENST00000467124 TTC9CQ8N5M4 171 aa0.58□□□□□ -2.32
VPS13A-209ENST00000467124 C1orf54Q8WWF1 131 aa0.58□□□□□ -2.32
VPS13A-209ENST00000467124 AQP10Q96PS8 301 aa0.58□□□□□ -2.32
VPS13A-209ENST00000467124 CACNA1HO95180 2353 aa0.58□□□□□ -2.32
VPS13A-209ENST00000467124 MYH9P35579 1960 aaKnown RBP0.57□□□□□ -2.32
VPS13A-209ENST00000467124 SMIM6P0DI80 62 aa0.57□□□□□ -2.32
VPS13A-209ENST00000467124 Q56UQ5 140 aa0.57□□□□□ -2.32
VPS13A-209ENST00000467124 SPINK6Q6UWN8 80 aa0.57□□□□□ -2.32
VPS13A-209ENST00000467124 TSLPQ969D9 159 aa0.57□□□□□ -2.32
VPS13A-209ENST00000467124 SCN3BQ9NY72 215 aa0.57□□□□□ -2.32
VPS13A-209ENST00000467124 ZMYM4Q5VZL5 1548 aa0.57□□□□□ -2.32
VPS13A-209ENST00000467124 USP24Q9UPU5 2620 aa0.57□□□□□ -2.32
VPS13A-209ENST00000467124 CADP27708 2225 aa0.57□□□□□ -2.32
VPS13A-209ENST00000467124 TTC28Q96AY4 2481 aa0.57□□□□□ -2.32
VPS13A-209ENST00000467124 GOLGA3Q08378 1498 aa0.56□□□□□ -2.32
VPS13A-209ENST00000467124 ARAP2Q8WZ64 1704 aa0.56□□□□□ -2.32
VPS13A-209ENST00000467124 PIGBOS1A0A0B4J2F0 54 aa0.56□□□□□ -2.32
VPS13A-209ENST00000467124 EFCAB10A6NFE3 127 aa0.56□□□□□ -2.32
VPS13A-209ENST00000467124 DLEU1O43261 78 aa0.56□□□□□ -2.32
VPS13A-209ENST00000467124 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
VPS13A-209ENST00000467124 G3V318 75 aa0.55□□□□□ -2.32
VPS13A-209ENST00000467124 FGF7P21781 194 aa0.55□□□□□ -2.32
VPS13A-209ENST00000467124 C12orf73Q69YU5 71 aa0.55□□□□□ -2.32
VPS13A-209ENST00000467124 BAGE3Q86Y29 109 aa0.55□□□□□ -2.32
VPS13A-209ENST00000467124 NPVFQ9HCQ7 196 aa0.55□□□□□ -2.32
VPS13A-209ENST00000467124 SCP2D1Q9UJQ7 156 aa0.55□□□□□ -2.32
VPS13A-209ENST00000467124 APOC2P02655 101 aa0.54□□□□□ -2.32
VPS13A-209ENST00000467124 CFAP126Q5VTH2 177 aa0.54□□□□□ -2.32
VPS13A-209ENST00000467124 PP6455Q8WZ26 134 aa0.54□□□□□ -2.32
VPS13A-209ENST00000467124 TNCP24821 2201 aa0.54□□□□□ -2.32
VPS13A-209ENST00000467124 NAIPQ13075 1403 aa0.54□□□□□ -2.32
VPS13A-209ENST00000467124 KCPQ6ZWJ8 1503 aa0.54□□□□□ -2.32
VPS13A-209ENST00000467124 KDM6BO15054 1643 aa0.53□□□□□ -2.32
VPS13A-209ENST00000467124 PIEZO1Q92508 2521 aa0.53□□□□□ -2.32
VPS13A-209ENST00000467124 OOSP1A8MZH6 123 aa0.53□□□□□ -2.32
VPS13A-209ENST00000467124 LINC00587B1AMM8 73 aa0.53□□□□□ -2.32
VPS13A-209ENST00000467124 COX6A2Q02221 97 aa0.53□□□□□ -2.32
VPS13A-209ENST00000467124 MRPL54Q6P161 138 aaKnown RBP0.53□□□□□ -2.32
VPS13A-209ENST00000467124 PPP3R2Q96LZ3 170 aa0.53□□□□□ -2.32
VPS13A-209ENST00000467124 NWD2Q9ULI1 1742 aa0.52□□□□□ -2.33
VPS13A-209ENST00000467124 CTXND1A0A1B0GTU2 59 aa0.52□□□□□ -2.33
VPS13A-209ENST00000467124 CCL18P55774 89 aa0.52□□□□□ -2.33
VPS13A-209ENST00000467124 BTG2P78543 158 aa0.52□□□□□ -2.33
VPS13A-209ENST00000467124 SPAG11BQ08648 103 aa0.52□□□□□ -2.33
VPS13A-209ENST00000467124 C9orf153Q5TBE3 101 aa0.52□□□□□ -2.33
VPS13A-209ENST00000467124 SPAG11AQ6PDA7 123 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms