RNA–Protein interactions for RNA: ENST00000427444.1

HFM1-202, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-202ENST00000427444 S100GP29377 79 aa-0.96□□□□□ -2.56
HFM1-202ENST00000427444 TFAMQ00059 246 aaKnown RBP-0.96□□□□□ -2.56
HFM1-202ENST00000427444 INSL4Q14641 139 aa-0.96□□□□□ -2.56
HFM1-202ENST00000427444 SSBP3-AS1Q7Z2R9 100 aa-0.96□□□□□ -2.56
HFM1-202ENST00000427444 UBE2DNLQ8IWF7 75 aa-0.96□□□□□ -2.56
HFM1-202ENST00000427444 BANF2Q9H503 90 aa-0.96□□□□□ -2.56
HFM1-202ENST00000427444 HLA-DRB4X5D2U9 266 aa-0.96□□□□□ -2.56
HFM1-202ENST00000427444 PRKDCP78527 4128 aaKnown RBP-0.96□□□□□ -2.56
HFM1-202ENST00000427444 CHD6Q8TD26 2715 aa-0.96□□□□□ -2.56
HFM1-202ENST00000427444 PHIPQ8WWQ0 1821 aa-0.96□□□□□ -2.56
HFM1-202ENST00000427444 USP9XQ93008 2570 aaPredicted RBP-0.97□□□□□ -2.56
HFM1-202ENST00000427444 BORCS7-ASMTA0A0B4J1R7 106 aa-0.97□□□□□ -2.56
HFM1-202ENST00000427444 FABP1P07148 127 aa-0.97□□□□□ -2.56
HFM1-202ENST00000427444 TMEM244Q5VVB8 128 aa-0.97□□□□□ -2.56
HFM1-202ENST00000427444 PBRM1Q86U86 1689 aa-0.97□□□□□ -2.57
HFM1-202ENST00000427444 TRGV1A0A0A0MS02 117 aa-0.98□□□□□ -2.57
HFM1-202ENST00000427444 DEGS1O15121 323 aa-0.98□□□□□ -2.57
HFM1-202ENST00000427444 RPS28P62857 69 aaKnown RBP-0.98□□□□□ -2.57
HFM1-202ENST00000427444 KRTAP19-6Q3LI70 58 aa-0.98□□□□□ -2.57
HFM1-202ENST00000427444 ATP11AUNQ6ZP68 121 aa-0.98□□□□□ -2.57
HFM1-202ENST00000427444 V9GYQ6 96 aa-0.98□□□□□ -2.57
HFM1-202ENST00000427444 MYO18BQ8IUG5 2567 aa-0.98□□□□□ -2.57
HFM1-202ENST00000427444 NIPBLQ6KC79 2804 aaeCLIP-0.98□□□□□ -2.572e-6■■■■■ 44.3
HFM1-202ENST00000427444 CCDC179H3BU77 68 aa-0.99□□□□□ -2.57
HFM1-202ENST00000427444 SPCS2Q15005 226 aa-0.99□□□□□ -2.57
HFM1-202ENST00000427444 CLLU1Q5K131 121 aa-0.99□□□□□ -2.57
HFM1-202ENST00000427444 BATF3Q9NR55 127 aa-0.99□□□□□ -2.57
HFM1-202ENST00000427444 MYH9P35579 1960 aaKnown RBP-0.99□□□□□ -2.57
HFM1-202ENST00000427444 NHSL1Q5SYE7 1610 aa-1□□□□□ -2.57
HFM1-202ENST00000427444 C2CD3Q4AC94 2353 aa-1□□□□□ -2.57
HFM1-202ENST00000427444 WNK1Q9H4A3 2382 aa-1□□□□□ -2.57
HFM1-202ENST00000427444 TRAV12-3A0A0B4J271 114 aa-1□□□□□ -2.57
HFM1-202ENST00000427444 J3QLW9 94 aa-1□□□□□ -2.57
HFM1-202ENST00000427444 TGP01266 2768 aa-1□□□□□ -2.57
HFM1-202ENST00000427444 BIVM-ERCC5R4GMW8 1640 aa-1□□□□□ -2.57
HFM1-202ENST00000427444 MYO15AQ9UKN7 3530 aa-1.01□□□□□ -2.57
HFM1-202ENST00000427444 YPEL1O60688 119 aa-1.01□□□□□ -2.57
HFM1-202ENST00000427444 SPRR2BP35325 72 aa-1.01□□□□□ -2.57
HFM1-202ENST00000427444 WFDC2Q14508 124 aa-1.01□□□□□ -2.57
HFM1-202ENST00000427444 DEFB109BQ30KR1 87 aa-1.01□□□□□ -2.57
HFM1-202ENST00000427444 SKA2Q8WVK7 121 aaPredicted RBP-1.01□□□□□ -2.57
HFM1-202ENST00000427444 PRO0255Q9UI72 69 aa-1.01□□□□□ -2.57
HFM1-202ENST00000427444 SCP2D1Q9UJQ7 156 aa-1.01□□□□□ -2.57
HFM1-202ENST00000427444 NRXN2Q9P2S2 1712 aa-1.01□□□□□ -2.57
HFM1-202ENST00000427444 LYSTQ99698 3801 aa-1.01□□□□□ -2.57
HFM1-202ENST00000427444 MGAM2Q2M2H8 2515 aa-1.01□□□□□ -2.57
HFM1-202ENST00000427444 EPG5Q9HCE0 2579 aa-1.02□□□□□ -2.57
HFM1-202ENST00000427444 FLNBO75369 2602 aaKnown RBP-1.02□□□□□ -2.57
HFM1-202ENST00000427444 TRAV36DV7A0A075B6V5 113 aa-1.02□□□□□ -2.57
HFM1-202ENST00000427444 M0R3E3 92 aa-1.02□□□□□ -2.57
HFM1-202ENST00000427444 BPTFQ12830 3046 aa-1.03□□□□□ -2.57
HFM1-202ENST00000427444 GOLGA3Q08378 1498 aa-1.03□□□□□ -2.57
HFM1-202ENST00000427444 ARAP1Q96P48 1450 aa-1.03□□□□□ -2.57
HFM1-202ENST00000427444 TNFSF15O95150 251 aa-1.03□□□□□ -2.57
HFM1-202ENST00000427444 MAGOHBQ96A72 148 aaKnown RBP-1.03□□□□□ -2.57
HFM1-202ENST00000427444 DDA1Q9BW61 102 aa-1.03□□□□□ -2.57
HFM1-202ENST00000427444 CNFNQ9BYD5 112 aa-1.03□□□□□ -2.57
HFM1-202ENST00000427444 LSM2Q9Y333 95 aaKnown RBP-1.03□□□□□ -2.57
HFM1-202ENST00000427444 A0A0D9SFI3 127 aa-1.04□□□□□ -2.58
HFM1-202ENST00000427444 G3V318 75 aa-1.04□□□□□ -2.58
HFM1-202ENST00000427444 M0R2P5 195 aa-1.04□□□□□ -2.58
HFM1-202ENST00000427444 SCTP09683 121 aa-1.04□□□□□ -2.58
HFM1-202ENST00000427444 CMPK1P30085 196 aa-1.04□□□□□ -2.58
HFM1-202ENST00000427444 PARP14Q460N5 1801 aa-1.04□□□□□ -2.58
HFM1-202ENST00000427444 A0A1B0GX51 115 aa-1.05□□□□□ -2.58
HFM1-202ENST00000427444 TCTE3Q8IZS6 198 aa-1.05□□□□□ -2.58
HFM1-202ENST00000427444 HIGD1AQ9Y241 93 aa-1.05□□□□□ -2.58
HFM1-202ENST00000427444 ARFGEF1Q9Y6D6 1849 aa-1.05□□□□□ -2.58
HFM1-202ENST00000427444 ITPR3Q14573 2671 aa-1.06□□□□□ -2.58
HFM1-202ENST00000427444 TSTD3H0UI37 97 aa-1.06□□□□□ -2.58
HFM1-202ENST00000427444 SPINK8P0C7L1 97 aa-1.06□□□□□ -2.58
HFM1-202ENST00000427444 RBM3P98179 157 aaKnown RBP-1.06□□□□□ -2.58
HFM1-202ENST00000427444 LAMA1P25391 3075 aa-1.07□□□□□ -2.58
HFM1-202ENST00000427444 SVEP1Q4LDE5 3571 aa-1.07□□□□□ -2.58
HFM1-202ENST00000427444 TRBV10-3A0A0K0K1G6 114 aa-1.07□□□□□ -2.58
HFM1-202ENST00000427444 EDDM3BP56851 147 aa-1.07□□□□□ -2.58
HFM1-202ENST00000427444 NDUFA12Q9UI09 145 aa-1.07□□□□□ -2.58
HFM1-202ENST00000427444 GINS2Q9Y248 185 aa-1.07□□□□□ -2.58
HFM1-202ENST00000427444 HSPB11Q9Y547 144 aa-1.07□□□□□ -2.58
HFM1-202ENST00000427444 PLCE1Q9P212 2302 aa-1.07□□□□□ -2.58
HFM1-202ENST00000427444 ANKRD11Q6UB99 2663 aaPredicted RBP-1.08□□□□□ -2.58
HFM1-202ENST00000427444 DNAH6Q9C0G6 4158 aa-1.08□□□□□ -2.58
HFM1-202ENST00000427444 SPAG11BQ08648 103 aa-1.08□□□□□ -2.58
HFM1-202ENST00000427444 LINC01545Q5VT33 79 aa-1.08□□□□□ -2.58
HFM1-202ENST00000427444 ACACBO00763 2458 aa-1.09□□□□□ -2.58
HFM1-202ENST00000427444 MXRA5Q9NR99 2828 aa-1.09□□□□□ -2.58
HFM1-202ENST00000427444 ERCC6Q03468 1493 aa-1.09□□□□□ -2.58
HFM1-202ENST00000427444 TRAV1-2A0A0B4J238 106 aa-1.09□□□□□ -2.58
HFM1-202ENST00000427444 Q5VSD8 79 aa-1.09□□□□□ -2.58
HFM1-202ENST00000427444 SMIM15Q7Z3B0 74 aa-1.09□□□□□ -2.58
HFM1-202ENST00000427444 CSPG4Q6UVK1 2322 aa-1.1□□□□□ -2.59
HFM1-202ENST00000427444 MUC22E2RYF6 1773 aaPredicted RBP-1.1□□□□□ -2.59
HFM1-202ENST00000427444 WFDC6Q9BQY6 131 aa-1.1□□□□□ -2.59
HFM1-202ENST00000427444 NBPF19A0A087WUL8 3843 aa-1.11□□□□□ -2.59
HFM1-202ENST00000427444 WDR87Q6ZQQ6 2873 aa-1.11□□□□□ -2.59
HFM1-202ENST00000427444 SPTBN1Q01082 2364 aaKnown RBP-1.11□□□□□ -2.59
HFM1-202ENST00000427444 PPRC1Q5VV67 1664 aaKnown RBP-1.11□□□□□ -2.59
HFM1-202ENST00000427444 IBTKQ9P2D0 1353 aaPredicted RBP-1.11□□□□□ -2.59
HFM1-202ENST00000427444 MYH13Q9UKX3 1938 aa-1.11□□□□□ -2.59
HFM1-202ENST00000427444 SIPA1L3O60292 1781 aaPredicted RBP-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms