RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ABCA1O95477 2261 aa6.43□□□□□ -1.38
UBR4-206ENST00000419533 ANKHD1Q8IWZ3 2542 aaKnown RBP6.43□□□□□ -1.38
UBR4-206ENST00000419533 KRTAP10-9P60411 292 aa6.43□□□□□ -1.38
UBR4-206ENST00000419533 C14orf177Q52M58 125 aa6.43□□□□□ -1.38
UBR4-206ENST00000419533 LINC01545Q5VT33 79 aa6.43□□□□□ -1.38
UBR4-206ENST00000419533 VSIG2Q96IQ7 327 aa6.43□□□□□ -1.38
UBR4-206ENST00000419533 IFITM1P13164 125 aa6.43□□□□□ -1.38
UBR4-206ENST00000419533 ODF3Q96PU9 254 aa6.43□□□□□ -1.38
UBR4-206ENST00000419533 Q6ZSV7 163 aa6.43□□□□□ -1.38
UBR4-206ENST00000419533 C22orf34Q6ZV56 151 aa6.43□□□□□ -1.38
UBR4-206ENST00000419533 TRBV10-1A0A0K0K1A3 114 aa6.42□□□□□ -1.38
UBR4-206ENST00000419533 LYRM9A8MSI8 78 aa6.42□□□□□ -1.38
UBR4-206ENST00000419533 H3BMG7 143 aa6.42□□□□□ -1.38
UBR4-206ENST00000419533 MSRB1Q9NZV6 116 aa6.42□□□□□ -1.38
UBR4-206ENST00000419533 EML6Q6ZMW3 1958 aa6.42□□□□□ -1.38
UBR4-206ENST00000419533 NOTCH2Q04721 2471 aa6.42□□□□□ -1.38
UBR4-206ENST00000419533 HAMPP81172 84 aa6.42□□□□□ -1.38
UBR4-206ENST00000419533 DEFB114Q30KQ6 69 aa6.42□□□□□ -1.38
UBR4-206ENST00000419533 EBI3Q14213 229 aa6.42□□□□□ -1.38
UBR4-206ENST00000419533 DEFB105AQ8NG35 78 aa6.42□□□□□ -1.38
UBR4-206ENST00000419533 KLK12Q9UKR0 248 aa6.42□□□□□ -1.38
UBR4-206ENST00000419533 LINC01548A6NM66 108 aa6.41□□□□□ -1.38
UBR4-206ENST00000419533 K7ERJ3 54 aa6.41□□□□□ -1.38
UBR4-206ENST00000419533 UBE2AP49459 152 aa6.41□□□□□ -1.38
UBR4-206ENST00000419533 CARD19Q96LW7 228 aa6.41□□□□□ -1.38
UBR4-206ENST00000419533 ORMDL1Q9P0S3 153 aa6.41□□□□□ -1.38
UBR4-206ENST00000419533 HIVEP2P31629 2446 aa6.41□□□□□ -1.38
UBR4-206ENST00000419533 CTRLP40313 264 aa6.41□□□□□ -1.38
UBR4-206ENST00000419533 RNF183Q96D59 192 aa6.41□□□□□ -1.38
UBR4-206ENST00000419533 A0A0J9YXV3 536 aa6.41□□□□□ -1.38
UBR4-206ENST00000419533 SPANXDQ9BXN6 97 aa6.41□□□□□ -1.38
UBR4-206ENST00000419533 DSCAMO60469 2012 aa6.4□□□□□ -1.38
UBR4-206ENST00000419533 SHANK1Q9Y566 2161 aa6.4□□□□□ -1.38
UBR4-206ENST00000419533 MED12LQ86YW9 2145 aa6.4□□□□□ -1.38
UBR4-206ENST00000419533 C9orf153Q5TBE3 101 aa6.4□□□□□ -1.38
UBR4-206ENST00000419533 C15orf53Q8NAA6 179 aa6.4□□□□□ -1.38
UBR4-206ENST00000419533 H3BQ85 93 aa6.4□□□□□ -1.39
UBR4-206ENST00000419533 DEFB1P60022 68 aa6.4□□□□□ -1.39
UBR4-206ENST00000419533 SPAG11BQ08648 103 aa6.4□□□□□ -1.39
UBR4-206ENST00000419533 MDFICQ9P1T7 246 aa6.4□□□□□ -1.39
UBR4-206ENST00000419533 CFC1BP0CG36 223 aa6.4□□□□□ -1.39
UBR4-206ENST00000419533 CFC1P0CG37 223 aa6.4□□□□□ -1.39
UBR4-206ENST00000419533 TIMM17AQ99595 171 aa6.4□□□□□ -1.39
UBR4-206ENST00000419533 SND1-IT1Q9HBX3 110 aa6.4□□□□□ -1.39
UBR4-206ENST00000419533 LY6LH3BQJ8 138 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 TRAV12-1A0A0B4J245 112 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 K7EQG2 157 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 C12orf74Q32Q52 190 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 TOMM6Q96B49 74 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 ANKRD11Q6UB99 2663 aaPredicted RBP6.39□□□□□ -1.39
UBR4-206ENST00000419533 IGKV1D-37A0A075B6S9 117 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 hADV29S1A0JD25 119 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 P0C879 139 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 FUSP35637 526 aaKnown RBP eCLIP6.39□□□□□ -1.39
UBR4-206ENST00000419533 PTPN13Q12923 2485 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 H0YGX0 51 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 C4orf48Q5BLP8 95 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 CEP295Q9C0D2 2601 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 TAX1BP3O14907 124 aa6.39□□□□□ -1.39
UBR4-206ENST00000419533 GTSF1Q8WW33 167 aa6.38□□□□□ -1.39
UBR4-206ENST00000419533 ARHGAP21Q5T5U3 1957 aa6.38□□□□□ -1.39
UBR4-206ENST00000419533 TRAV26-1A0A087WT03 109 aa6.38□□□□□ -1.39
UBR4-206ENST00000419533 MIFP14174 115 aa6.38□□□□□ -1.39
UBR4-206ENST00000419533 FAM222AQ5U5X8 452 aa6.38□□□□□ -1.39
UBR4-206ENST00000419533 DYSFO75923 2080 aa6.38□□□□□ -1.39
UBR4-206ENST00000419533 IGHV4-4A0A075B6R2 117 aa6.38□□□□□ -1.39
UBR4-206ENST00000419533 DEFB131BA0A096LNP1 70 aa6.38□□□□□ -1.39
UBR4-206ENST00000419533 CRYGBP07316 175 aa6.38□□□□□ -1.39
UBR4-206ENST00000419533 ATRXP46100 2492 aa6.38□□□□□ -1.39
UBR4-206ENST00000419533 RPL39P62891 51 aaKnown RBP6.38□□□□□ -1.39
UBR4-206ENST00000419533 PCP2Q8IVA1 136 aa6.38□□□□□ -1.39
UBR4-206ENST00000419533 NDUFS5O43920 106 aa6.37□□□□□ -1.39
UBR4-206ENST00000419533 PROP1O75360 226 aa6.37□□□□□ -1.39
UBR4-206ENST00000419533 C11orf1Q9H5F2 150 aa6.37□□□□□ -1.39
UBR4-206ENST00000419533 TINCRA0A1B0GVN0 87 aa6.37□□□□□ -1.39
UBR4-206ENST00000419533 OPRPNQ99935 248 aaPredicted RBP6.37□□□□□ -1.39
UBR4-206ENST00000419533 ZNF702PQ9H963 129 aa6.37□□□□□ -1.39
UBR4-206ENST00000419533 TLN1Q9Y490 2541 aaKnown RBP6.37□□□□□ -1.39
UBR4-206ENST00000419533 Q6ZTI0 123 aa6.36□□□□□ -1.39
UBR4-206ENST00000419533 BAALC-AS2P0C853 105 aa6.36□□□□□ -1.39
UBR4-206ENST00000419533 BAALCQ8WXS3 180 aa6.36□□□□□ -1.39
UBR4-206ENST00000419533 CPAMD8Q8IZJ3 1885 aa6.36□□□□□ -1.39
UBR4-206ENST00000419533 ANKRD39Q53RE8 183 aa6.36□□□□□ -1.39
UBR4-206ENST00000419533 LINC00173Q6ZV60 143 aa6.36□□□□□ -1.39
UBR4-206ENST00000419533 C20orf203Q8NBC4 194 aa6.36□□□□□ -1.39
UBR4-206ENST00000419533 LINC01006Q8NI28 216 aa6.36□□□□□ -1.39
UBR4-206ENST00000419533 MED13LQ71F56 2210 aa6.36□□□□□ -1.39
UBR4-206ENST00000419533 NOTCH3Q9UM47 2321 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 NCR3O14931 201 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 C19orf71A6NCJ1 209 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 C11orf86A6NJI1 115 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 NDUFB1O75438 58 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 H7C423 109 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 CRYGDP07320 174 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 PSMB8P28062 276 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 MUSTN1Q8IVN3 82 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 YPEL4Q96NS1 127 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 CITED1Q99966 193 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 CHD8Q9HCK8 2581 aa6.35□□□□□ -1.39
UBR4-206ENST00000419533 TRAV10A0A0B4J240 114 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms