RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Gm12355A2A4X6 163 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 AgmatA2AS89 358 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 SellP18337 372 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Srsf3P84104 164 aaKnown RBP12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Dtx1Q61010 627 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Znf474Q6V5K9 347 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 4930447A16RikQ9D5F6 132 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Ifitm7G3X9Z2 141 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Pf4Q9Z126 105 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Trav16nA0A075B634 117 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Trav7-4A0A075B6C1 113 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Trav12-1A0N8R1 115 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Zcchc24B2RVL6 241 aaKnown RBP12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Defb33Q30KN3 62 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Srsf6Q3TWW8 339 aaKnown RBP12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Trav7d-4Q5R1H9 113 aa12.75□□□□□ -0.37
Chd3-201ENSMUST00000092971 Zpld1Q8BGZ8 415 aa12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 Srp19Q9D7A6 144 aa12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 Hdgfl3Q9JMG7 202 aa12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 Tjp1P39447 1745 aaKnown RBP12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 Gm10190Q8BSD7 107 aa12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 Thy1P01831 162 aa12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 P01896 185 aa12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 Hint1P70349 126 aaKnown RBP12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 MymxQ2Q5T5 84 aa12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 Prss33Q80WM7 277 aa12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 BcorQ8CGN4 1759 aa12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 Trav3-3Q5R1C3 114 aa12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 Reg4Q9D8G5 157 aa12.74□□□□□ -0.37
Chd3-201ENSMUST00000092971 C1ql4Q4ZJM9 238 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Sfxn3Q91V61 321 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Lrp5Q91VN0 1614 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Sptbn2Q68FG2 2388 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Trbv13-3A0A0B4J1H2 113 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 LtaP09225 202 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Vgll4Q80V24 287 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Mrpl51Q9CPY1 128 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Arpc1aQ9R0Q6 370 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Frrs1lB1AXV0 293 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Foxl1Q64731 336 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Prr3Q811B5 190 aaKnown RBP12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Gnb1lQ9EQ15 326 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Ankrd31A0A140LI88 1765 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Cep290Q6A078 2472 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Iglv3A0A0B4J1K5 122 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Sc5dO88822 299 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 H2-Ab1P01921 265 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Hbb-b2P02089 147 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 CortP56469 109 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Trav6d-4Q5R1I0 115 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Prima1Q810F0 153 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Olfr223Q8VF69 319 aa12.73□□□□□ -0.37
Chd3-201ENSMUST00000092971 Trbv19A0A0B4J1H4 117 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Rnf115Q9D0C1 305 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Clec5aQ9R007 190 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Ccl6P27784 116 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Sh3bgrl3Q91VW3 93 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Ca2P00920 260 aaKnown RBP12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Znf787Q8BIF9 381 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Tspan2Q922J6 221 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Klf13Q9JJZ6 289 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Cabin1G3X8Q1 2187 aaKnown RBP12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 H3BKT1 185 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Foxr2Q3UM89 302 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Fblim1Q71FD7 375 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Vmn1r197Q8R265 298 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Lyzl1Q9CPX3 148 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Pet100P0DJE0 76 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Phxr1P15973 60 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Zfp72Q0VFY0 435 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Nkain3Q3URJ8 181 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Gm5615Q3UW02 101 aa12.72□□□□□ -0.37
Chd3-201ENSMUST00000092971 Snx22Q8C084 192 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Gm45783A0A1B0GT48 74 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Gm20825J3QM67 227 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Gm933J3QPC1 141 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Pate4Q09098 99 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Ssty2Q149W4 227 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Foxg1Q60987 481 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Rbfox3Q8BIF2 374 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 CklfQ9DAS1 152 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Igkv4-90A0A075B5L3 117 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Igkv4-62A0A0G2JDW9 117 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Gm9513B3GLJ6 99 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Gstp2P46425 210 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Ucp2P70406 309 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Olfr1199Q8VF94 310 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Nat6Q9R123 314 aa12.71□□□□□ -0.37
Chd3-201ENSMUST00000092971 Igkv15-103A0A140T8P3 115 aa12.71□□□□□ -0.38
Chd3-201ENSMUST00000092971 Igsf11P0C673 428 aa12.71□□□□□ -0.38
Chd3-201ENSMUST00000092971 Dynlt3P56387 116 aa12.71□□□□□ -0.38
Chd3-201ENSMUST00000092971 Isg15Q64339 161 aaKnown RBP12.71□□□□□ -0.38
Chd3-201ENSMUST00000092971 LbhQ9CX60 105 aa12.71□□□□□ -0.38
Chd3-201ENSMUST00000092971 Hmga2P52927 108 aa12.71□□□□□ -0.38
Chd3-201ENSMUST00000092971 Prss29Q99MS4 279 aa12.7□□□□□ -0.38
Chd3-201ENSMUST00000092971 1700008P02RikQ9DAJ8 175 aa12.7□□□□□ -0.38
Chd3-201ENSMUST00000092971 Mpv17P19258 176 aa12.7□□□□□ -0.38
Chd3-201ENSMUST00000092971 Asphd1Q2TA57 360 aa12.7□□□□□ -0.38
Chd3-201ENSMUST00000092971 Poc1aQ8JZX3 405 aa12.7□□□□□ -0.38
Chd3-201ENSMUST00000092971 Opn3Q9WUK7 400 aa12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 64.4 ms