RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Pfn1P62962 140 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Prss38Q3UKY7 322 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Rpl36-ps4A0A140T8U4 117 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Tm4sf19E9Q9H8 206 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Ltbp3Q61810 1268 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Vmn1r63Q9EPT1 300 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Gli3Q61602 1583 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Gata2O09100 480 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Smad7O35253 426 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Faap20Q3UN58 186 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Cdpf1Q8R3A2 119 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Pgpep1Q9ESW8 209 aa13.87□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Trav12d-1A0N8R0 115 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Higd1bQ99JY6 98 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 4930544G11RikQ9CR99 193 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Susd3Q9D176 269 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Mrps11Q9DCA2 191 aaKnown RBP13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Apc2Q9Z1K7 2274 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Olfr875Q7TRE5 310 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Wdr82Q8BFQ4 313 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 PifoQ9D9W1 207 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Tdrd6P61407 2134 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Ssc4dA1L0T3 586 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Tmem141A2AJB2 108 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Zfp27P10077 819 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 SlpiP97430 131 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Cd52Q64389 74 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Gng5Q80SZ7 68 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 EomesO54839 707 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 H2-DMb1P35737 261 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Trav7-2Q5R1I3 112 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Chac1Q8R3J5 223 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 BmfQ91ZE9 185 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Ccl8Q9Z121 97 aa13.86□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Gm9945Q8BNZ3 91 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Gm16503Q8C6M9 103 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Cryba2Q9JJV1 197 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Ighv1-54A0A075B5W5 117 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Cox8bP48772 70 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Efna2P52801 209 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Q3U1D9 316 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 H2al3Q9D4U4 128 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Gfra3O35118 397 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 AdmP97297 184 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Q3UNZ8 350 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 4930596D02RikQ3V0H9 216 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Trav7d-3Q5R1I1 112 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Lrp10Q7TQH7 713 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Fam53bQ8BGR5 422 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 BC049762Q8C601 163 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Mapk1ip1Q9D7G9 263 aa13.85□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Masp2Q91WP0 685 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Hrct1Q9D6B9 109 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Tmem196V9GX04 182 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Ckap5A2AGT5 2032 aaKnown RBP13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 GchfrP99025 84 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Znf260Q62513 407 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Ltbp2O08999 1813 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Ighv1-43A0A0A6YXN5 117 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Fgf11P70378 225 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Dlx6P70397 175 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Q6DIA7 600 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Tmem186Q9CR76 216 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 A930017K11RikE0CXQ2 571 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Igfbpl1Q80W15 270 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Rnd1Q8BLR7 232 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Crybb3Q9JJU9 211 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Snrnp200Q6P4T2 2136 aaKnown RBP13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Gm45521A0A1B0GRK0 198 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 BC030500E9Q6W0 185 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 PolP10400 120 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Gm10767Q3TQP0 103 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Zfp936Q3ULA8 456 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Higd1cQ76I25 96 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 C330021F23RikQ8C7T0 141 aa13.84□□□□□ -0.19
Col17a1-202ENSMUST00000086923 Trav6n-7A0A075B6A6 116 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Pdlim4P70271 330 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Gm12888Q3UW77 119 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Smim19Q80ZU4 107 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Awat1A2ADU9 328 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 MdfiP70331 251 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Slc17a9Q8VCL5 447 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Klri1B2KG20 248 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 P01822 137 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 2210407C18RikQ6YI28 220 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Rspo2Q8BFU0 243 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Igkv16-104A0A0B4J1I1 116 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Gm45844A0A1B0GRQ2 137 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Gm15128A2ADW8 449 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Zfp11P10751 647 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Olfr1381Q7TQT4 311 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Prickle3Q80VL3 624 aa13.83□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Col4a1P02463 1669 aa13.82□□□□□ -0.2
Col17a1-202ENSMUST00000086923 B130006D01RikQ8BRH6 153 aa13.82□□□□□ -0.2
Col17a1-202ENSMUST00000086923 BmperQ8CJ69 685 aa13.82□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Arap2Q8BZ05 1703 aa13.82□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Efnb3O35393 340 aa13.82□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Sap30O88574 220 aa13.82□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Il3raP26952 396 aa13.82□□□□□ -0.2
Col17a1-202ENSMUST00000086923 Samd5Q3V1H9 173 aa13.82□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms