RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 GchfrP99025 84 aa12.15□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Gm4792Q569Q2 183 aa12.15□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Taar9Q5QD04 348 aa12.15□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Cxxc4Q6NXI8 198 aa12.15□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Spred3Q6P6N5 408 aa12.15□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Olfr1181Q7TR18 311 aa12.15□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Tnfsf18Q7TS55 173 aa12.15□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Olfr33Q8VGX7 318 aa12.15□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Rps21Q9CQR2 83 aaKnown RBP12.15□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Fstl3Q9EQC7 256 aa12.15□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Trav6n-7A0A075B6A6 116 aa12.14□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Gm4565A0A140LJ87 301 aa12.14□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Olfr1189A2AV11 306 aa12.14□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Gm6176J3QK59 301 aa12.14□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Gm4567Q3UTA8 301 aa12.14□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 NotoQ5TIS6 240 aa12.14□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Gucd1Q8BZI6 239 aa12.14□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Znhit1Q8R331 154 aa12.14□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Olfr1402Q8VET1 320 aa12.14□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Mrps36Q9CQX8 102 aa12.14□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 3110082J24RikF6Z6Z2 108 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Igll1P20764 209 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Rnase9P60154 184 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Pate4Q09098 99 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Shisal1Q0VBP7 198 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Clpsl2Q3UW21 102 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Rbfox2Q8BP71 449 aaKnown RBP12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Trib1Q8K4K4 372 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 P2ry6Q9ERK9 328 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ccl28Q9JIL2 130 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 FrylF8VQ05 3007 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 VcanQ62059 3357 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Gm37388A0A0A6YY46 143 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Scgb1b19F6WYW0 93 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 A630023A22RikJ3QP60 199 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Cd200r3Q5UKY4 296 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Olfr1419Q7TQS2 343 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Mbnl2Q8C181 373 aaKnown RBP12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Olfr1183Q8VFF8 303 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Olfr894Q9EQB2 313 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Crim1Q9JLL0 1037 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Tomm40Q9QYA2 361 aa12.13□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Trav6d-3A0A075B6B3 112 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ighv9-3A0A0B4J1J5 117 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 MyadmO35682 320 aaKnown RBP12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 ApcsP12246 224 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ms4a13Q5FWC3 203 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Trav6-3Q5R1E6 112 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Rnf24Q8BGI1 148 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ercc8Q8CFD5 397 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Zdhhc16Q9ESG8 361 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Bex1Q9R224 128 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Gm9920D3YVZ2 140 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Nkx3-1P97436 237 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Fbln7Q501P1 440 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Prdx2Q61171 198 aaKnown RBP12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Hnrnpa3Q8BG05 379 aaKnown RBP12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Nabp2Q8R2Y9 212 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Defb3Q9WTL0 63 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Pcnx2Q5DU28 2122 aa12.12□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Trav15-1-dv6-1Q5R1D2 117 aa12.11□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ifna14Q810G3 189 aa12.11□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Zmat4Q8BZ94 229 aa12.11□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Tmem140Q8BGY5 185 aa12.11□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Olfr481Q8VGI5 312 aa12.11□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Itgb1bp1O35671 200 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Rpp30O88796 268 aaKnown RBP12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Slc17a2Q5SZA1 478 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Tbr1Q64336 681 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Gm9944Q8C559 102 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Olfr123Q8VFQ1 309 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Psmb2Q9R1P3 201 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Lama1P19137 3084 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Myo7bQ99MZ6 2113 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ighv9-2A0A0B4J1J4 117 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Gm20458E9PXJ7 78 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Pax8Q00288 457 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 A230072I06RikQ3UUJ8 172 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Tmem40Q4FJU9 225 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ccl12Q62401 104 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Cdcp2Q8BQH6 427 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ammecr1lQ8JZZ6 310 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ap5s1Q9D742 170 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Vstm5Q9D806 199 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ramp1Q9WTJ5 148 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Timm8a1Q9WVA2 97 aa12.1□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 P01804 111 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 EnsaP60840 121 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 RhogP84096 191 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Gm10384Q3UQ87 92 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 SelplgQ62170 397 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ifna12Q80SS5 189 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Znf787Q8BIF9 381 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ssbp2Q9CYZ8 361 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 eef1akmt3D3YWP0 232 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 H3BKT1 185 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Gabra2P26048 451 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Ube2l3P68037 154 aaKnown RBP12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Olfr153Q7TR48 307 aa12.09□□□□□ -0.47
Ushbp1-201ENSMUST00000049184 Mrps18cQ8R2L5 143 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms