RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 UNC79Q9P2D8 2635 aa-0.3□□□□□ -2.46
CCDC66-221ENST00000487739 DSTQ03001 7570 aaKnown RBP-0.3□□□□□ -2.46
CCDC66-221ENST00000487739 SYNJ1O43426 1573 aa-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 LAMB1P07942 1786 aa-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 MYH9P35579 1960 aaKnown RBP-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 BORCS7-ASMTA0A0B4J1R7 106 aa-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 A0A1B0GX51 115 aa-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 DEGS1O15121 323 aa-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 RBP4P02753 201 aa-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 APODP05090 189 aa-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 C4orf33Q8N1A6 199 aa-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 Q96NJ1 140 aa-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 LSM2Q9Y333 95 aaKnown RBP-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 HSPB11Q9Y547 144 aa-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 UHRF1BP1LA0JNW5 1464 aa-0.31□□□□□ -2.46
CCDC66-221ENST00000487739 TRBV7-1A0A0A6YYK4 115 aa-0.32□□□□□ -2.46
CCDC66-221ENST00000487739 NEFHP12036 1026 aa-0.32□□□□□ -2.46
CCDC66-221ENST00000487739 IFITM1P13164 125 aa-0.32□□□□□ -2.46
CCDC66-221ENST00000487739 NDUFA11Q86Y39 141 aa-0.32□□□□□ -2.46
CCDC66-221ENST00000487739 TCTE3Q8IZS6 198 aa-0.32□□□□□ -2.46
CCDC66-221ENST00000487739 C20orf197Q8N268 126 aa-0.32□□□□□ -2.46
CCDC66-221ENST00000487739 TMEM242Q9NWH2 141 aa-0.32□□□□□ -2.46
CCDC66-221ENST00000487739 MYH6P13533 1939 aa-0.32□□□□□ -2.46
CCDC66-221ENST00000487739 ERCC6Q03468 1493 aa-0.33□□□□□ -2.46
CCDC66-221ENST00000487739 J3QLW9 94 aa-0.33□□□□□ -2.46
CCDC66-221ENST00000487739 SCTP09683 121 aa-0.33□□□□□ -2.46
CCDC66-221ENST00000487739 ACYP2P14621 99 aa-0.33□□□□□ -2.46
CCDC66-221ENST00000487739 SSBP1Q04837 148 aaKnown RBP-0.33□□□□□ -2.46
CCDC66-221ENST00000487739 COX7B2Q8TF08 81 aa-0.33□□□□□ -2.46
CCDC66-221ENST00000487739 ERG28Q9UKR5 140 aa-0.33□□□□□ -2.46
CCDC66-221ENST00000487739 V9GYV3 84 aa-0.33□□□□□ -2.46
CCDC66-221ENST00000487739 ARAP1Q96P48 1450 aa-0.34□□□□□ -2.46
CCDC66-221ENST00000487739 SIPA1L3O60292 1781 aaPredicted RBP-0.34□□□□□ -2.46
CCDC66-221ENST00000487739 TRAV12-3A0A0B4J271 114 aa-0.34□□□□□ -2.46
CCDC66-221ENST00000487739 GNG14A0A1W2PPG7 69 aa-0.34□□□□□ -2.46
CCDC66-221ENST00000487739 H0YJX3 145 aa-0.34□□□□□ -2.46
CCDC66-221ENST00000487739 NBEAP1P0C6P0 100 aa-0.34□□□□□ -2.46
CCDC66-221ENST00000487739 SLC48A1Q6P1K1 146 aa-0.34□□□□□ -2.46
CCDC66-221ENST00000487739 ATP11AUNQ6ZP68 121 aa-0.34□□□□□ -2.46
CCDC66-221ENST00000487739 Q6ZRX8 168 aa-0.34□□□□□ -2.46
CCDC66-221ENST00000487739 TENM4Q6N022 2769 aa-0.34□□□□□ -2.46
CCDC66-221ENST00000487739 FLNCQ14315 2725 aa-0.35□□□□□ -2.46
CCDC66-221ENST00000487739 YPEL1O60688 119 aa-0.35□□□□□ -2.47
CCDC66-221ENST00000487739 SPCS2Q15005 226 aa-0.35□□□□□ -2.47
CCDC66-221ENST00000487739 FAM74A4Q5TZK3 123 aa-0.35□□□□□ -2.47
CCDC66-221ENST00000487739 MAGOHBQ96A72 148 aaKnown RBP-0.35□□□□□ -2.47
CCDC66-221ENST00000487739 TRGV1A0A0A0MS02 117 aa-0.36□□□□□ -2.47
CCDC66-221ENST00000487739 CCDC179H3BU77 68 aa-0.36□□□□□ -2.47
CCDC66-221ENST00000487739 M0R129 80 aa-0.36□□□□□ -2.47
CCDC66-221ENST00000487739 M0R2P5 195 aa-0.36□□□□□ -2.47
CCDC66-221ENST00000487739 GOLGA3Q08378 1498 aa-0.36□□□□□ -2.47
CCDC66-221ENST00000487739 TMEM14DPA8MWL7 114 aa-0.37□□□□□ -2.47
CCDC66-221ENST00000487739 GCHFRP30047 84 aa-0.37□□□□□ -2.47
CCDC66-221ENST00000487739 CCDC153Q494R4 210 aa-0.37□□□□□ -2.47
CCDC66-221ENST00000487739 LINC01545Q5VT33 79 aa-0.37□□□□□ -2.47
CCDC66-221ENST00000487739 MRPL40Q9NQ50 206 aaKnown RBP-0.37□□□□□ -2.47
CCDC66-221ENST00000487739 NDUFA12Q9UI09 145 aa-0.37□□□□□ -2.47
CCDC66-221ENST00000487739 KIAA0100Q14667 2235 aaKnown RBP-0.38□□□□□ -2.47
CCDC66-221ENST00000487739 ABCA2Q9BZC7 2435 aa-0.38□□□□□ -2.47
CCDC66-221ENST00000487739 ZNF815PA8K554 130 aa-0.38□□□□□ -2.47
CCDC66-221ENST00000487739 C10orf142B7Z368 130 aa-0.38□□□□□ -2.47
CCDC66-221ENST00000487739 CFDP00746 253 aaPredicted RBP-0.38□□□□□ -2.47
CCDC66-221ENST00000487739 INSL4Q14641 139 aa-0.38□□□□□ -2.47
CCDC66-221ENST00000487739 SSBP3-AS1Q7Z2R9 100 aa-0.38□□□□□ -2.47
CCDC66-221ENST00000487739 IFT172Q9UG01 1749 aa-0.38□□□□□ -2.47
CCDC66-221ENST00000487739 MIC13Q5XKP0 118 aa-0.39□□□□□ -2.47
CCDC66-221ENST00000487739 UBE2DNLQ8IWF7 75 aa-0.39□□□□□ -2.47
CCDC66-221ENST00000487739 BIVM-ERCC5R4GMW8 1640 aa-0.39□□□□□ -2.47
CCDC66-221ENST00000487739 CHD9Q3L8U1 2897 aa-0.39□□□□□ -2.47
CCDC66-221ENST00000487739 NSD1Q96L73 2696 aaPredicted RBP-0.4□□□□□ -2.47
CCDC66-221ENST00000487739 MYH8P13535 1937 aa-0.4□□□□□ -2.47
CCDC66-221ENST00000487739 CACNA1AO00555 2505 aa-0.4□□□□□ -2.47
CCDC66-221ENST00000487739 TRBV20-1A0A075B6N2 111 aa-0.4□□□□□ -2.47
CCDC66-221ENST00000487739 G3V318 75 aa-0.4□□□□□ -2.47
CCDC66-221ENST00000487739 NCS1P62166 190 aa-0.4□□□□□ -2.47
CCDC66-221ENST00000487739 C10orf82Q8WW14 230 aa-0.4□□□□□ -2.47
CCDC66-221ENST00000487739 HSPG2P98160 4391 aa-0.4□□□□□ -2.47
CCDC66-221ENST00000487739 MUC12Q9UKN1 5478 aa-0.41□□□□□ -2.47
CCDC66-221ENST00000487739 FAM236AA0A1B0GUQ0 79 aa-0.41□□□□□ -2.48
CCDC66-221ENST00000487739 FAM236BA0A1B0GV22 79 aa-0.41□□□□□ -2.48
CCDC66-221ENST00000487739 DBIP07108 87 aaKnown RBP-0.41□□□□□ -2.48
CCDC66-221ENST00000487739 PIRTP0C851 137 aa-0.41□□□□□ -2.48
CCDC66-221ENST00000487739 KRTAP19-7Q3SYF9 63 aa-0.41□□□□□ -2.48
CCDC66-221ENST00000487739 MORN2Q502X0 79 aa-0.41□□□□□ -2.48
CCDC66-221ENST00000487739 TAC4Q86UU9 113 aa-0.41□□□□□ -2.48
CCDC66-221ENST00000487739 VSTM2AQ8TAG5 236 aa-0.41□□□□□ -2.48
CCDC66-221ENST00000487739 BATF3Q9NR55 127 aa-0.41□□□□□ -2.48
CCDC66-221ENST00000487739 ZANQ9Y493 2812 aa-0.41□□□□□ -2.48
CCDC66-221ENST00000487739 NCOR1O75376 2440 aa-0.42□□□□□ -2.48
CCDC66-221ENST00000487739 NHSL1Q5SYE7 1610 aa-0.42□□□□□ -2.48
CCDC66-221ENST00000487739 STAB1Q9NY15 2570 aa-0.42□□□□□ -2.48
CCDC66-221ENST00000487739 IBTKQ9P2D0 1353 aaPredicted RBP-0.42□□□□□ -2.48
CCDC66-221ENST00000487739 PLXNB2O15031 1838 aa-0.42□□□□□ -2.48
CCDC66-221ENST00000487739 TRAV1-2A0A0B4J238 106 aa-0.42□□□□□ -2.48
CCDC66-221ENST00000487739 IGLC6P0CF74 106 aa-0.42□□□□□ -2.48
CCDC66-221ENST00000487739 EDDM3BP56851 147 aa-0.42□□□□□ -2.48
CCDC66-221ENST00000487739 B2MP61769 119 aa-0.42□□□□□ -2.48
CCDC66-221ENST00000487739 SPANXN1Q5VSR9 72 aa-0.42□□□□□ -2.48
CCDC66-221ENST00000487739 SPANXCQ9NY87 97 aa-0.42□□□□□ -2.48
CCDC66-221ENST00000487739 MUC2Q02817 5179 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms