RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 ATP6V0E1O15342 81 aa8.66□□□□□ -1.02
PDE6B-201ENST00000255622 TMEM86BQ8N661 226 aa8.66□□□□□ -1.02
PDE6B-201ENST00000255622 RPS28P62857 69 aaKnown RBP8.66□□□□□ -1.02
PDE6B-201ENST00000255622 TWIST1Q15672 202 aa8.66□□□□□ -1.02
PDE6B-201ENST00000255622 MRPL51Q4U2R6 128 aaKnown RBP8.66□□□□□ -1.02
PDE6B-201ENST00000255622 C10orf105Q8TEF2 133 aa8.66□□□□□ -1.02
PDE6B-201ENST00000255622 NTN5Q8WTR8 489 aaPredicted RBP8.66□□□□□ -1.02
PDE6B-201ENST00000255622 GAS8-AS1O95177 125 aa8.65□□□□□ -1.02
PDE6B-201ENST00000255622 EBI3Q14213 229 aa8.65□□□□□ -1.02
PDE6B-201ENST00000255622 FAM104BQ5XKR9 115 aa8.65□□□□□ -1.02
PDE6B-201ENST00000255622 UQCRQO14949 82 aa8.65□□□□□ -1.02
PDE6B-201ENST00000255622 SAA4P35542 130 aa8.65□□□□□ -1.02
PDE6B-201ENST00000255622 PIP4P2Q8N4L2 257 aa8.65□□□□□ -1.02
PDE6B-201ENST00000255622 Q5XG85 94 aa8.65□□□□□ -1.03
PDE6B-201ENST00000255622 DTX2Q86UW9 622 aa8.65□□□□□ -1.03
PDE6B-201ENST00000255622 LINC00527Q9UJ94 153 aa8.65□□□□□ -1.03
PDE6B-201ENST00000255622 IGHV3OR16-10A0A075B7F0 116 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 LY6DQ14210 128 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 MINOS1Q5TGZ0 78 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 CLEC19AQ6UXS0 136 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 DPH3Q96FX2 82 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 ODF3Q96PU9 254 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 PYGO1Q9Y3Y4 419 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 MINOS1-NBL1R4GNA1 71 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 FAM208BQ5VWN6 2430 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 CREBBPQ92793 2442 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 NPYP01303 97 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 TRACP01848 142 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 ORMDL3Q8N138 153 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 ACACBO00763 2458 aa8.64□□□□□ -1.03
PDE6B-201ENST00000255622 TRAV41A0A0B4J266 112 aa8.63□□□□□ -1.03
PDE6B-201ENST00000255622 OXTP01178 125 aa8.63□□□□□ -1.03
PDE6B-201ENST00000255622 PFN2P35080 140 aa8.63□□□□□ -1.03
PDE6B-201ENST00000255622 CCDC140Q96MF4 163 aa8.63□□□□□ -1.03
PDE6B-201ENST00000255622 BPESC1Q9GZL8 116 aa8.63□□□□□ -1.03
PDE6B-201ENST00000255622 ZFAND3Q9H8U3 227 aa8.63□□□□□ -1.03
PDE6B-201ENST00000255622 U3KQK5 164 aa8.63□□□□□ -1.03
PDE6B-201ENST00000255622 UTP20O75691 2785 aaKnown RBP8.63□□□□□ -1.03
PDE6B-201ENST00000255622 TCL1BO95988 128 aa8.63□□□□□ -1.03
PDE6B-201ENST00000255622 CKS2P33552 79 aa8.63□□□□□ -1.03
PDE6B-201ENST00000255622 TIRAPP58753 221 aa8.63□□□□□ -1.03
PDE6B-201ENST00000255622 HHLA3Q9XRX5 114 aa8.63□□□□□ -1.03
PDE6B-201ENST00000255622 CLPSL1A2RUU4 121 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 BUB3O43684 328 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 SLC25A20O43772 301 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 MORN3Q6PF18 240 aaPredicted RBP8.62□□□□□ -1.03
PDE6B-201ENST00000255622 NXT2Q9NPJ8 142 aaKnown RBP8.62□□□□□ -1.03
PDE6B-201ENST00000255622 LGALS9BQ3B8N2 356 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 LGALS9CQ6DKI2 356 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 FAM110DQ8TAY7 271 aaPredicted RBP8.62□□□□□ -1.03
PDE6B-201ENST00000255622 UBE2E1P51965 193 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 COX8CQ7Z4L0 72 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 Q8N1Y9 231 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 LINC00526Q96FQ7 95 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 PSMG3-AS1Q96PY0 264 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 ABCA2Q9BZC7 2435 aa8.62□□□□□ -1.03
PDE6B-201ENST00000255622 CRYGDP07320 174 aa8.61□□□□□ -1.03
PDE6B-201ENST00000255622 PRSS1P07477 247 aa8.61□□□□□ -1.03
PDE6B-201ENST00000255622 TMEM190Q8WZ59 177 aa8.61□□□□□ -1.03
PDE6B-201ENST00000255622 MYO18BQ8IUG5 2567 aa8.61□□□□□ -1.03
PDE6B-201ENST00000255622 TEX49A0A1B0GTD5 131 aa8.61□□□□□ -1.03
PDE6B-201ENST00000255622 GATA1P15976 413 aaPredicted RBP8.61□□□□□ -1.03
PDE6B-201ENST00000255622 PAX8Q06710 450 aa8.61□□□□□ -1.03
PDE6B-201ENST00000255622 NSUN5P1Q3KNT7 163 aa8.61□□□□□ -1.03
PDE6B-201ENST00000255622 BRK1Q8WUW1 75 aa8.61□□□□□ -1.03
PDE6B-201ENST00000255622 FAM19A4Q96LR4 140 aa8.61□□□□□ -1.03
PDE6B-201ENST00000255622 C19orf84I3L1E1 186 aa8.6□□□□□ -1.03
PDE6B-201ENST00000255622 RNF185Q96GF1 192 aa8.6□□□□□ -1.03
PDE6B-201ENST00000255622 C11orf21Q9P2W6 132 aa8.6□□□□□ -1.03
PDE6B-201ENST00000255622 TRAV13-1A0A0B4J241 112 aa8.6□□□□□ -1.03
PDE6B-201ENST00000255622 OVOL1O14753 267 aa8.6□□□□□ -1.03
PDE6B-201ENST00000255622 LMO4P61968 165 aa8.6□□□□□ -1.03
PDE6B-201ENST00000255622 IFI27L1Q96BM0 104 aa8.6□□□□□ -1.03
PDE6B-201ENST00000255622 MYMXA0A1B0GTQ4 84 aa8.6□□□□□ -1.03
PDE6B-201ENST00000255622 TMEM89A2RUT3 159 aa8.6□□□□□ -1.03
PDE6B-201ENST00000255622 USP9YO00507 2555 aaPredicted RBP8.6□□□□□ -1.03
PDE6B-201ENST00000255622 CFAP46Q8IYW2 2715 aa8.59□□□□□ -1.03
PDE6B-201ENST00000255622 J3QQQ9 107 aa8.59□□□□□ -1.03
PDE6B-201ENST00000255622 M0R2P5 195 aa8.59□□□□□ -1.03
PDE6B-201ENST00000255622 HBDP02042 147 aa8.59□□□□□ -1.03
PDE6B-201ENST00000255622 EFNA4P52798 201 aa8.59□□□□□ -1.03
PDE6B-201ENST00000255622 CSPG4Q6UVK1 2322 aa8.59□□□□□ -1.03
PDE6B-201ENST00000255622 TAL2Q16559 108 aa8.59□□□□□ -1.03
PDE6B-201ENST00000255622 AGPAT4-IT1Q9H0P7 198 aa8.59□□□□□ -1.03
PDE6B-201ENST00000255622 IGKV3D-20A0A0C4DH25 116 aa8.58□□□□□ -1.04
PDE6B-201ENST00000255622 H7C2G1 150 aa8.58□□□□□ -1.04
PDE6B-201ENST00000255622 MAPKAPK5-AS1Q8N8E1 139 aa8.58□□□□□ -1.04
PDE6B-201ENST00000255622 TRGV3P03979 118 aa8.58□□□□□ -1.04
PDE6B-201ENST00000255622 BRD3OSQ6XYD6 125 aa8.58□□□□□ -1.04
PDE6B-201ENST00000255622 FLNCQ14315 2725 aa8.58□□□□□ -1.04
PDE6B-201ENST00000255622 HLA-DRB4P13762 266 aa8.58□□□□□ -1.04
PDE6B-201ENST00000255622 C5orf56Q8N8D9 126 aa8.58□□□□□ -1.04
PDE6B-201ENST00000255622 HLA-DRB4X5D2U9 266 aa8.58□□□□□ -1.04
PDE6B-201ENST00000255622 POLQO75417 2590 aa8.58□□□□□ -1.04
PDE6B-201ENST00000255622 CRIP2P52943 208 aaPredicted RBP8.57□□□□□ -1.04
PDE6B-201ENST00000255622 TRAV26-2A0A0B4J265 109 aa8.57□□□□□ -1.04
PDE6B-201ENST00000255622 DEFB1P60022 68 aa8.57□□□□□ -1.04
PDE6B-201ENST00000255622 SPRY2O43597 315 aa8.56□□□□□ -1.04
PDE6B-201ENST00000255622 IGF1P05019 195 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms