RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 ATP6V0E2Q8NHE4 81 aa11.39□□□□□ -0.59
UBE4B-201ENST00000253251 VWC2LB2RUY7 222 aa11.39□□□□□ -0.59
UBE4B-201ENST00000253251 IGLV2-8P01709 118 aa11.39□□□□□ -0.59
UBE4B-201ENST00000253251 DEFB114Q30KQ6 69 aa11.39□□□□□ -0.59
UBE4B-201ENST00000253251 ZFP2Q6ZN57 461 aa11.39□□□□□ -0.59
UBE4B-201ENST00000253251 TRBV10-1A0A0K0K1A3 114 aa11.39□□□□□ -0.59
UBE4B-201ENST00000253251 ANGP03950 147 aaKnown RBP11.39□□□□□ -0.59
UBE4B-201ENST00000253251 TTC32Q5I0X7 151 aa11.39□□□□□ -0.59
UBE4B-201ENST00000253251 PTPN13Q12923 2485 aa11.39□□□□□ -0.59
UBE4B-201ENST00000253251 PGPEP1Q9NXJ5 209 aa11.39□□□□□ -0.59
UBE4B-201ENST00000253251 ZNF702PQ9H963 129 aa11.38□□□□□ -0.59
UBE4B-201ENST00000253251 TNCP24821 2201 aa11.38□□□□□ -0.59
UBE4B-201ENST00000253251 GATA1P15976 413 aaPredicted RBP11.38□□□□□ -0.59
UBE4B-201ENST00000253251 A0A1B0GXF2 115 aa11.37□□□□□ -0.59
UBE4B-201ENST00000253251 RPL39LQ96EH5 51 aaKnown RBP11.37□□□□□ -0.59
UBE4B-201ENST00000253251 SMAD5-AS1Q9Y6J3 95 aa11.37□□□□□ -0.59
UBE4B-201ENST00000253251 TRAV12-1A0A0B4J245 112 aa11.37□□□□□ -0.59
UBE4B-201ENST00000253251 IGLV1-40P01703 118 aa11.37□□□□□ -0.59
UBE4B-201ENST00000253251 NPC2P61916 151 aa11.37□□□□□ -0.59
UBE4B-201ENST00000253251 TIMM17AQ99595 171 aa11.37□□□□□ -0.59
UBE4B-201ENST00000253251 TRBV7-3A0A075B6L6 115 aa11.37□□□□□ -0.59
UBE4B-201ENST00000253251 SMIM9A6NGZ8 99 aa11.37□□□□□ -0.59
UBE4B-201ENST00000253251 LINC01545Q5VT33 79 aa11.37□□□□□ -0.59
UBE4B-201ENST00000253251 CPAMD8Q8IZJ3 1885 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 HERV-K104P63124 156 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 ZNF580Q9UK33 172 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 TRAV8-2A0A0B4J237 113 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 GYPEP15421 78 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 CRIP2P52943 208 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-201ENST00000253251 GATD1Q8NB37 220 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 TRBV20-1A0A075B6N2 111 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 IGLC6P0CF74 106 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 DKK2Q9UBU2 259 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 H3BMM0 161 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 ZNF124Q15973 351 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 ATG2AQ2TAZ0 1938 aa11.36□□□□□ -0.59
UBE4B-201ENST00000253251 HILS1P60008 231 aa11.35□□□□□ -0.59
UBE4B-201ENST00000253251 TRAV4A0A0B4J268 109 aa11.35□□□□□ -0.59
UBE4B-201ENST00000253251 PRSS47A8MTI9 375 aa11.35□□□□□ -0.59
UBE4B-201ENST00000253251 DLEU1O43261 78 aa11.35□□□□□ -0.59
UBE4B-201ENST00000253251 BRI3O95415 125 aa11.35□□□□□ -0.59
UBE4B-201ENST00000253251 PIEZO2Q9H5I5 2752 aa11.35□□□□□ -0.59
UBE4B-201ENST00000253251 CRLF1O75462 422 aa11.34□□□□□ -0.59
UBE4B-201ENST00000253251 TSPAN13O95857 204 aa11.34□□□□□ -0.59
UBE4B-201ENST00000253251 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.33□□□□□ -0.59
UBE4B-201ENST00000253251 IGKV2-29A2NJV5 120 aaPredicted RBP11.33□□□□□ -0.59
UBE4B-201ENST00000253251 SHISA2Q6UWI4 295 aa11.33□□□□□ -0.59
UBE4B-201ENST00000253251 SLC25A29Q8N8R3 303 aa11.33□□□□□ -0.59
UBE4B-201ENST00000253251 COX11Q9Y6N1 276 aa11.33□□□□□ -0.59
UBE4B-201ENST00000253251 A0A0J9YY99 117 aa11.33□□□□□ -0.6
UBE4B-201ENST00000253251 UBE2V1Q13404 147 aa11.33□□□□□ -0.6
UBE4B-201ENST00000253251 INAFM1C9JVW0 142 aa11.33□□□□□ -0.6
UBE4B-201ENST00000253251 TOMM6Q96B49 74 aa11.33□□□□□ -0.6
UBE4B-201ENST00000253251 LURAP1LQ8IV03 231 aa11.33□□□□□ -0.6
UBE4B-201ENST00000253251 ZNF625Q96I27 306 aaPredicted RBP11.33□□□□□ -0.6
UBE4B-201ENST00000253251 LY6G6DO95868 133 aa11.32□□□□□ -0.6
UBE4B-201ENST00000253251 ZNF80P51504 273 aaPredicted RBP11.32□□□□□ -0.6
UBE4B-201ENST00000253251 HHLA3Q9XRX5 114 aa11.32□□□□□ -0.6
UBE4B-201ENST00000253251 TRAV13-2A0A0B4J235 113 aa11.32□□□□□ -0.6
UBE4B-201ENST00000253251 SPRY2O43597 315 aa11.32□□□□□ -0.6
UBE4B-201ENST00000253251 C2orf82Q6UX34 121 aa11.32□□□□□ -0.6
UBE4B-201ENST00000253251 C10orf126Q8N4M7 172 aa11.32□□□□□ -0.6
UBE4B-201ENST00000253251 KIR2DL5BA0A0G2JN68 375 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 KIR2DL5BA0A0G2JPC4 375 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 KIR2DL5AQ8N109 375 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 TRAV8-4A0A0B4J246 113 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 MDFICQ9P1T7 246 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 PRO0255Q9UI72 69 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 EREGO14944 169 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 CCL18P55774 89 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 CEND1Q8N111 149 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 KIAA1549Q9HCM3 1950 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 NDUFA7O95182 113 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 IFITM1P13164 125 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 DEFB1P60022 68 aa11.31□□□□□ -0.6
UBE4B-201ENST00000253251 A0A096LPF7 62 aa11.3□□□□□ -0.6
UBE4B-201ENST00000253251 C9orf118A6NHY6 69 aa11.3□□□□□ -0.6
UBE4B-201ENST00000253251 SPINK8P0C7L1 97 aa11.3□□□□□ -0.6
UBE4B-201ENST00000253251 PFN2P35080 140 aa11.3□□□□□ -0.6
UBE4B-201ENST00000253251 Q6ZVH6 145 aa11.3□□□□□ -0.6
UBE4B-201ENST00000253251 LINC01006Q8NI28 216 aa11.3□□□□□ -0.6
UBE4B-201ENST00000253251 PRO1854Q9UHT4 67 aa11.3□□□□□ -0.6
UBE4B-201ENST00000253251 DEFB135Q30KP9 77 aa11.29□□□□□ -0.6
UBE4B-201ENST00000253251 LINC00322Q6ZN03 302 aaPredicted RBP11.29□□□□□ -0.6
UBE4B-201ENST00000253251 C1orf43Q9BWL3 253 aa11.29□□□□□ -0.6
UBE4B-201ENST00000253251 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
UBE4B-201ENST00000253251 LYRM9A8MSI8 78 aa11.29□□□□□ -0.6
UBE4B-201ENST00000253251 NKAPP1Q8N9T2 125 aa11.29□□□□□ -0.6
UBE4B-201ENST00000253251 SNHG12Q9BXW3 62 aa11.29□□□□□ -0.6
UBE4B-201ENST00000253251 BVES-AS1Q5T3Y7 98 aa11.28□□□□□ -0.6
UBE4B-201ENST00000253251 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
UBE4B-201ENST00000253251 C20orf203Q8NBC4 194 aa11.28□□□□□ -0.6
UBE4B-201ENST00000253251 C20orf173Q96LM9 149 aa11.28□□□□□ -0.6
UBE4B-201ENST00000253251 FGF6P10767 208 aa11.28□□□□□ -0.6
UBE4B-201ENST00000253251 F8WEM9 126 aa11.28□□□□□ -0.6
UBE4B-201ENST00000253251 NUPR1O60356 82 aa11.28□□□□□ -0.6
UBE4B-201ENST00000253251 NAA38Q9BRA0 125 aaKnown RBP11.28□□□□□ -0.6
UBE4B-201ENST00000253251 CCDC168Q8NDH2 2452 aa11.27□□□□□ -0.6
UBE4B-201ENST00000253251 DEFB125Q8N687 156 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 231.6 ms