RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gm28845A0A087WR76 214 aa12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr466E9Q2B9 308 aa12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 TymsP07607 307 aa12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ppp1r3cQ7TMB3 317 aa12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr1386Q7TQT0 309 aa12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr802Q8VGJ2 312 aa12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 SonQ9QX47 2444 aaKnown RBP12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 Slc25a17O70579 307 aa12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 HexbP20060 536 aa12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ube2g2P60605 165 aa12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 Rpl8P62918 257 aaKnown RBP12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 Rbp4Q00724 201 aa12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ttc9cQ810A3 171 aa12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ythdf2Q91YT7 579 aaKnown RBP12.8□□□□□ -0.36
Trim39-203ENSMUST00000113706 H2-M5A7VMS3 348 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Pfdn2O70591 154 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Svs5P30933 122 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 C1qtnf9Q4ZJN1 333 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Zim1Q8C393 579 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ociad1Q9CRD0 247 aaKnown RBP12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Usp24B1AY13 2617 aaKnown RBP12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 MiaQ61865 130 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Zfp420Q7TMN8 578 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr1371Q7TQT7 311 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Pcgf1Q8R023 259 aaKnown RBP12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ccdc198Q9CPZ1 294 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Mettl9Q9EPL4 318 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr1458A0A1L1SSD5 307 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 B2mP01887 119 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Hist1h2bmP10854 126 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 ParlQ5XJY4 377 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Hist1h2bhQ64478 126 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Hist2h2bbQ64525 126 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Hist1h2bcQ6ZWY9 126 aaKnown RBP12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr917Q7TRC3 309 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 RetnlgQ8K426 117 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 4930583I09RikQ9D2E3 102 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr154Q9QY00 318 aa12.79□□□□□ -0.36
Trim39-203ENSMUST00000113706 Scgb1b12A0A087WP21 93 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Gm5129F6YHA9 99 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Gnb1P62874 340 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr303Q8VFP0 319 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Pth2Q91W27 100 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Srd5a2Q99N99 254 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ndufb10Q9DCS9 176 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Nav2E9Q842 2432 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Esp6A8R0U0 136 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Fut9O88819 359 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Prrx1P63013 245 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ccsmst1Q6RUT7 136 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Vmn1r222Q8R269 308 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Rab31Q921E2 194 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ssbp3Q9D032 388 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Dolpp1Q9JMF7 238 aa12.78□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr709-ps1A0A140T8J9 307 aa12.77□□□□□ -0.36
Trim39-203ENSMUST00000113706 Rsg1A2A825 258 aa12.77□□□□□ -0.36
Trim39-203ENSMUST00000113706 Ctdsp1P58466 261 aa12.77□□□□□ -0.36
Trim39-203ENSMUST00000113706 Arf6P62331 175 aa12.77□□□□□ -0.36
Trim39-203ENSMUST00000113706 Znf575Q3TXZ1 239 aa12.77□□□□□ -0.36
Trim39-203ENSMUST00000113706 Usf2Q64705 346 aaKnown RBP12.77□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr335-psQ7TRY6 312 aa12.77□□□□□ -0.36
Trim39-203ENSMUST00000113706 4922502D21RikQ8C634 189 aa12.77□□□□□ -0.36
Trim39-203ENSMUST00000113706 Olfr476Q8VGI4 310 aa12.77□□□□□ -0.36
Trim39-203ENSMUST00000113706 Cd209gD3Z5D4 194 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Efnb3O35393 340 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Rom1P32958 351 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gfra1P97785 468 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Rhox10Q4TU83 196 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Adat3Q6PAT0 349 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 B3gnt9Q8VI16 399 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Dok5Q91ZM9 306 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Stard4Q99JV5 224 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Vmn1r47Q9EQ51 310 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gm28171A0A087WQ19 227 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr1191-ps1A0A1L1STD5 311 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 P01674 108 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr1440Q8VFV4 315 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Parm1Q923D3 296 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Ap5s1Q9D742 170 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 DysfQ9ESD7 2090 aa12.77□□□□□ -0.37
Trim39-203ENSMUST00000113706 Ighv1-31A0A0A6YWK5 117 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gm21732J3QM79 361 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gm21921J3QNB5 361 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Hoxa3P02831 443 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Ifna4P07351 186 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 NdnP25233 325 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Spam1P48794 512 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Dnajc30P59041 219 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Sap30lQ5SQF8 182 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Psg22Q810J1 475 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Q9D9C7 252 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Trav17A0A075B655 113 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Ighv5-8A0A075B676 92 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Pde6dO55057 150 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Zfp874aQ8BX23 447 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gm9958Q8C9U4 106 aa12.76□□□□□ -0.37
Trim39-203ENSMUST00000113706 Taf15Q8BQ46 557 aaKnown RBP12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Rhbdd2Q8VEK2 361 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Cma2Q91VB1 246 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Mogat1Q91ZV4 335 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms