RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 EtdQ80SW5 59 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Gm5148Q8BGG2 154 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Gm5868Q8BJG1 145 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Gm9945Q8BNZ3 91 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Dcbld1Q9D4J3 503 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Polr2aP08775 1970 aaKnown RBP12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 E430018J23RikE9PZQ8 461 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Ca2P00920 260 aaKnown RBP12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Atp6v0cP63082 155 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Pilrb2Q2YFS1 225 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Glrx5Q80Y14 152 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Gm17334Q8C6U3 126 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Trav7-4A0A075B6C1 113 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Igkv14-100A0A0G2JG36 117 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 1700031F05RikB1AX30 191 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Prr19B2RW88 366 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Trav7d-4Q5R1H9 113 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Trav6d-4Q5R1I0 115 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 RalyQ64012 312 aaKnown RBP12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Prss29Q99MS4 279 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Klk1b27Q9JM71 263 aa12.42□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Olfr1178Q7TR20 323 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Dppa2Q9CWH0 301 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Vmn1r54Q9EPB8 315 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Fndc7A2AED3 737 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Irf2bp2E9Q1P8 570 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Hoxa5P09021 270 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Znf691Q3TDE8 283 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Reep5Q60870 185 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 AdoQ6PDY2 256 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Rspo4Q8BJ73 228 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Slc25a28Q8R0Z5 364 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Atxn7l1Q9CZ05 146 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Foxa3P35584 353 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 AmtnQ9D3J8 213 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 IcosQ9WVS0 200 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Trav6-1A0A075B5Z8 112 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 VwceQ3U515 929 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Klf11Q8K1S5 502 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Olfr1350Q8VF34 308 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Rnf115Q9D0C1 305 aa12.41□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Olfr749E9Q438 313 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Klf12O35738 402 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Csn3P06796 181 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Gm11110Q3U4K9 109 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Ss18l1Q8BW22 402 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Arpc1aQ9R0Q6 370 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 NgfP01139 241 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 LtaP09225 202 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Scrt1Q99M85 348 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Hcfc2Q9D968 241 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Scgb1b11A0A087WQJ0 93 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Trbv17A0A140T8P8 114 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 GzmbP04187 247 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Trav15-1-dv6-1Q5R1D2 117 aa12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Mcrip2Q9CQB2 160 aaKnown RBP12.4□□□□□ -0.42
Pcdh20-201ENSMUST00000061628 Gm20825J3QM67 227 aa12.4□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 P01801 115 aa12.4□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Efnb1P52795 345 aa12.4□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Ssty2Q149W4 227 aa12.4□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Rnf224Q3UIW8 156 aa12.4□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Fgf16Q9ESL8 207 aa12.4□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Spint3Q3UW09 88 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Wdr82Q8BFQ4 313 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Olfr1012Q8VFJ7 311 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Necap2Q9D1J1 266 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Zfp114B2RRA8 586 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 MymxQ2Q5T5 84 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Zdhhc16Q9ESG8 361 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Trbv1A0A0B4J1G7 116 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 LgalslbQ7TPX9 165 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Lhx2Q9Z0S2 406 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Gm42517A0A1Y7VLQ2 374 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Olfr150Q60895 312 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 OstcQ78XF5 149 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 H2-M10.4Q85ZW8 331 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 GalmQ8K157 342 aa12.39□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 P18525 117 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Gstp2P46425 210 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Rpl23P62830 140 aaKnown RBP12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Ankrd12G5E893 2041 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Olfr1369-ps1A0A140T8K7 317 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Gm17727E9Q4V7 109 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Rnase2O35291 155 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Fgf5P15656 264 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Tmprss12Q3V0Q7 336 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Olfr1419Q7TQS2 343 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 1700013G24RikQ9DAC6 286 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Atp5iQ06185 71 aaKnown RBP12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Pate2Q3UW31 111 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Spink6Q8BT20 105 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Dock11A2AF47 2073 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Iglc3P01845 104 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Trdv4Q5R1A3 115 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Zic3Q62521 466 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Mrpl27Q99N92 148 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Wbp2nlQ9D529 359 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Tspoap1Q7TNF8 1846 aa12.38□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Amn1B8JKV0 258 aa12.37□□□□□ -0.43
Pcdh20-201ENSMUST00000061628 Tnfsf11O35235 316 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms