RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 P01726 129 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Fam117aQ7TNF9 451 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Gm9881Q8BR56 211 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Tmem123Q91Z22 195 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Spcs1Q9D958 161 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Gm26920S4R2A5 56 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Ighv9-4A0A0A6YWH6 117 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Tmem88bQ3TYP4 173 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Defa20Q45VN2 95 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Ly6eQ64253 130 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 9030612E09RikQ8CE20 140 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 G6pc2Q9Z186 355 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Med13lQ6JPI3 2207 aa3.91□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Gm45753A0A1C7CYU8 86 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Gm2026A2ART4 498 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 B4galt1P15535 399 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Gucd1Q8BZI6 239 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Olfr493Q8VEW5 314 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Olfr1256Q8VGP1 306 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Abhd12Q99LR1 398 aaKnown RBP3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Mansc1Q9CR33 414 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Kcne3Q9WTW2 103 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Klf5Q9Z0Z7 446 aaKnown RBP3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Gm6525A0A0A6YW33 106 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Ighv6-5A0A0A6YWS9 119 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Defa9P50707 93 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Trav5d-4Q5R1F6 114 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Vsig8Q6P3A4 417 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Olfr484Q8VFD3 321 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Igkv6-25A0A140T8N7 115 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 OdamA1E960 273 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Gm20830J3KML6 227 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 C1ql1O88992 258 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Ren2P00796 401 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 MymxQ2Q5T5 84 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Tspan2Q922J6 221 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Igkv9-124A0A0G2JDR3 117 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Trav12d-1A0N8R0 115 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Alox12bO70582 701 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Klk1b4P00757 256 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Timp3P39876 211 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Mdga2P60755 949 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 MmdQ9CQY7 238 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Lipt2Q9D009 231 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Klk4Q9Z0M1 255 aa3.9□□□□□ -1.78
Prkdc-201ENSMUST00000023352 Znf296E9Q6W4 445 aaKnown RBP3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 A630076J17RikJ3QQ32 107 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Otx1P80205 355 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Vmn1r197Q8R265 298 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Zfp959Q91VM8 539 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Trbv13-3A0A0B4J1H2 113 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Gm39566A0A1B0GT45 1251 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Vmn1r181Q0P547 304 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Defa23Q5G866 93 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 TdhQ8K3F7 373 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Rab29Q91YQ1 204 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Mrpl43Q99N89 183 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Nup37Q9CWU9 326 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Arhgap32Q811P8 2089 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Tmem238A9JSM3 176 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Olfr918E9PVZ7 325 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Gm6970F7DCP6 221 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Shisa3Q3UPR0 238 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Znf629Q6A085 867 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Olfr94Q6UAH0 386 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Olfr222Q7TS30 318 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Tmem177Q8BPE4 311 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 CklfQ9DAS1 152 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Iah1Q9DB29 249 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Cbln1Q9R171 193 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Egr4Q9WUF2 478 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Col5a3Q9JLI2 1739 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Ighv6-4A0A0A6YX19 119 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 P01808 119 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Defa24Q5G865 93 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Lhfpl4Q5U4E0 247 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Prdx2Q61171 198 aaKnown RBP3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Ear1P97426 155 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 H2-DMb2Q31099 261 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Insig2Q91WG1 225 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Ociad2Q9D8W7 154 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 RprmQ9JJ72 109 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Cryba1P02525 198 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Cacng7P62956 275 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Kcnab1P63143 401 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 SriQ6P069 198 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Smim19Q80ZU4 107 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Emc6Q9CQW0 110 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Tmem42Q9CR22 157 aa3.9□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Trav10nA0A075B622 114 aa3.89□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Trav10A0A075B642 114 aa3.89□□□□□ -1.79
Prkdc-201ENSMUST00000023352 SellP18337 372 aa3.89□□□□□ -1.79
Prkdc-201ENSMUST00000023352 TgfaP48030 159 aa3.89□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Trdv4Q5R1A3 115 aa3.89□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Nup35Q8R4R6 325 aa3.89□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Obox1Q9D350 204 aa3.89□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Phlda3Q9WV95 125 aa3.89□□□□□ -1.79
Prkdc-201ENSMUST00000023352 LenepQ9WVB6 61 aa3.89□□□□□ -1.79
Prkdc-201ENSMUST00000023352 BC048679D3YXE9 172 aa3.89□□□□□ -1.79
Prkdc-201ENSMUST00000023352 Egr1P08046 533 aa3.89□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms