Protein–RNA interactions for Protein: A0A0A6YWS9

Ighv6-5, Immunoglobulin heavy variable V6-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-5A0A0A6YWS9 Gm25239-201ENSMUST00000174915 86 ntBASIC29,93■■■□□ 2,38
Ighv6-5A0A0A6YWS9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28,61■■■□□ 2,17
Ighv6-5A0A0A6YWS9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27,63■■■□□ 2,01
Ighv6-5A0A0A6YWS9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27,55■■■□□ 2
Ighv6-5A0A0A6YWS9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27,53■■■□□ 2
Ighv6-5A0A0A6YWS9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27,37■■□□□ 1,97
Ighv6-5A0A0A6YWS9 Psd-208ENSMUST00000224556 2034 ntBASIC26,78■■□□□ 1,88
Ighv6-5A0A0A6YWS9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Ighv6-5A0A0A6YWS9 Gm15042-201ENSMUST00000120212 883 ntBASIC26,27■■□□□ 1,8
Ighv6-5A0A0A6YWS9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Ighv6-5A0A0A6YWS9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
Ighv6-5A0A0A6YWS9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25,97■■□□□ 1,75
Ighv6-5A0A0A6YWS9 Gm24109-201ENSMUST00000175489 103 ntBASIC25,87■■□□□ 1,73
Ighv6-5A0A0A6YWS9 Gm15045-201ENSMUST00000117359 883 ntBASIC25,6■■□□□ 1,69
Ighv6-5A0A0A6YWS9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Ighv6-5A0A0A6YWS9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Ighv6-5A0A0A6YWS9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25,55■■□□□ 1,68
Ighv6-5A0A0A6YWS9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Ighv6-5A0A0A6YWS9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Ighv6-5A0A0A6YWS9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25,37■■□□□ 1,65
Ighv6-5A0A0A6YWS9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25,33■■□□□ 1,65
Ighv6-5A0A0A6YWS9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25,28■■□□□ 1,64
Ighv6-5A0A0A6YWS9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25,17■■□□□ 1,62
Ighv6-5A0A0A6YWS9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25,14■■□□□ 1,62
Ighv6-5A0A0A6YWS9 Gm23366-201ENSMUST00000175022 89 ntBASIC25,1■■□□□ 1,61
Ighv6-5A0A0A6YWS9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25,07■■□□□ 1,6
Ighv6-5A0A0A6YWS9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,01■■□□□ 1,59
Ighv6-5A0A0A6YWS9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24,92■■□□□ 1,58
Ighv6-5A0A0A6YWS9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24,85■■□□□ 1,57
Ighv6-5A0A0A6YWS9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24,84■■□□□ 1,57
Ighv6-5A0A0A6YWS9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24,72■■□□□ 1,55
Ighv6-5A0A0A6YWS9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24,69■■□□□ 1,54
Ighv6-5A0A0A6YWS9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24,65■■□□□ 1,54
Ighv6-5A0A0A6YWS9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24,62■■□□□ 1,53
Ighv6-5A0A0A6YWS9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24,62■■□□□ 1,53
Ighv6-5A0A0A6YWS9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24,61■■□□□ 1,53
Ighv6-5A0A0A6YWS9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,55■■□□□ 1,52
Ighv6-5A0A0A6YWS9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24,52■■□□□ 1,52
Ighv6-5A0A0A6YWS9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,47■■□□□ 1,51
Ighv6-5A0A0A6YWS9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24,43■■□□□ 1,5
Ighv6-5A0A0A6YWS9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24,41■■□□□ 1,5
Ighv6-5A0A0A6YWS9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24,41■■□□□ 1,5
Ighv6-5A0A0A6YWS9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Ighv6-5A0A0A6YWS9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24,26■■□□□ 1,47
Ighv6-5A0A0A6YWS9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24,2■■□□□ 1,46
Ighv6-5A0A0A6YWS9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24,2■■□□□ 1,46
Ighv6-5A0A0A6YWS9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24,15■■□□□ 1,46
Ighv6-5A0A0A6YWS9 Gm10524-201ENSMUST00000181931 1893 ntBASIC24,15■■□□□ 1,46
Ighv6-5A0A0A6YWS9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24,08■■□□□ 1,45
Ighv6-5A0A0A6YWS9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24,07■■□□□ 1,44
Ighv6-5A0A0A6YWS9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24,07■■□□□ 1,44
Ighv6-5A0A0A6YWS9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23,97■■□□□ 1,43
Ighv6-5A0A0A6YWS9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23,94■■□□□ 1,42
Ighv6-5A0A0A6YWS9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23,92■■□□□ 1,42
Ighv6-5A0A0A6YWS9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23,9■■□□□ 1,42
Ighv6-5A0A0A6YWS9 Gm42596-201ENSMUST00000196305 1958 ntBASIC23,87■■□□□ 1,41
Ighv6-5A0A0A6YWS9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23,86■■□□□ 1,41
Ighv6-5A0A0A6YWS9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23,85■■□□□ 1,41
Ighv6-5A0A0A6YWS9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,84■■□□□ 1,41
Ighv6-5A0A0A6YWS9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23,78■■□□□ 1,4
Ighv6-5A0A0A6YWS9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23,76■■□□□ 1,39
Ighv6-5A0A0A6YWS9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23,75■■□□□ 1,39
Ighv6-5A0A0A6YWS9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23,72■■□□□ 1,39
Ighv6-5A0A0A6YWS9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23,67■■□□□ 1,38
Ighv6-5A0A0A6YWS9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23,64■■□□□ 1,38
Ighv6-5A0A0A6YWS9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23,64■■□□□ 1,37
Ighv6-5A0A0A6YWS9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23,59■■□□□ 1,37
Ighv6-5A0A0A6YWS9 Gm25238-201ENSMUST00000174914 89 ntBASIC23,54■■□□□ 1,36
Ighv6-5A0A0A6YWS9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23,52■■□□□ 1,36
Ighv6-5A0A0A6YWS9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23,52■■□□□ 1,36
Ighv6-5A0A0A6YWS9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23,52■■□□□ 1,35
Ighv6-5A0A0A6YWS9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23,51■■□□□ 1,35
Ighv6-5A0A0A6YWS9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23,5■■□□□ 1,35
Ighv6-5A0A0A6YWS9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23,5■■□□□ 1,35
Ighv6-5A0A0A6YWS9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23,49■■□□□ 1,35
Ighv6-5A0A0A6YWS9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Ighv6-5A0A0A6YWS9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Ighv6-5A0A0A6YWS9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23,32■■□□□ 1,32
Ighv6-5A0A0A6YWS9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23,31■■□□□ 1,32
Ighv6-5A0A0A6YWS9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23,27■■□□□ 1,32
Ighv6-5A0A0A6YWS9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23,27■■□□□ 1,32
Ighv6-5A0A0A6YWS9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23,26■■□□□ 1,31
Ighv6-5A0A0A6YWS9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23,24■■□□□ 1,31
Ighv6-5A0A0A6YWS9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23,24■■□□□ 1,31
Ighv6-5A0A0A6YWS9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23,21■■□□□ 1,31
Ighv6-5A0A0A6YWS9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23,18■■□□□ 1,3
Ighv6-5A0A0A6YWS9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23,12■■□□□ 1,29
Ighv6-5A0A0A6YWS9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23,12■■□□□ 1,29
Ighv6-5A0A0A6YWS9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23,08■■□□□ 1,29
Ighv6-5A0A0A6YWS9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23,06■■□□□ 1,28
Ighv6-5A0A0A6YWS9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23,05■■□□□ 1,28
Ighv6-5A0A0A6YWS9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23,03■■□□□ 1,28
Ighv6-5A0A0A6YWS9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23,02■■□□□ 1,28
Ighv6-5A0A0A6YWS9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23,01■■□□□ 1,27
Ighv6-5A0A0A6YWS9 Gm27325-201ENSMUST00000175467 74 ntBASIC23■■□□□ 1,27
Ighv6-5A0A0A6YWS9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22,99■■□□□ 1,27
Ighv6-5A0A0A6YWS9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,96■■□□□ 1,27
Ighv6-5A0A0A6YWS9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22,94■■□□□ 1,26
Ighv6-5A0A0A6YWS9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22,87■■□□□ 1,25
Ighv6-5A0A0A6YWS9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Retrieved 100 of 76,532 protein–RNA pairs in 10,2 ms