Protein–RNA interactions for Protein: A0A0A6YWS9

Ighv6-5, Immunoglobulin heavy variable V6-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-5A0A0A6YWS9 Gm25239-201ENSMUST00000174915 86 ntBASIC29.93■■■□□ 2.38
Ighv6-5A0A0A6YWS9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ighv6-5A0A0A6YWS9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Ighv6-5A0A0A6YWS9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ighv6-5A0A0A6YWS9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Ighv6-5A0A0A6YWS9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ighv6-5A0A0A6YWS9 Psd-208ENSMUST00000224556 2034 ntBASIC26.78■■□□□ 1.88
Ighv6-5A0A0A6YWS9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ighv6-5A0A0A6YWS9 Gm15042-201ENSMUST00000120212 883 ntBASIC26.27■■□□□ 1.8
Ighv6-5A0A0A6YWS9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ighv6-5A0A0A6YWS9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ighv6-5A0A0A6YWS9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ighv6-5A0A0A6YWS9 Gm24109-201ENSMUST00000175489 103 ntBASIC25.87■■□□□ 1.73
Ighv6-5A0A0A6YWS9 Gm15045-201ENSMUST00000117359 883 ntBASIC25.6■■□□□ 1.69
Ighv6-5A0A0A6YWS9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ighv6-5A0A0A6YWS9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ighv6-5A0A0A6YWS9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ighv6-5A0A0A6YWS9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ighv6-5A0A0A6YWS9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ighv6-5A0A0A6YWS9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.37■■□□□ 1.65
Ighv6-5A0A0A6YWS9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Ighv6-5A0A0A6YWS9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ighv6-5A0A0A6YWS9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ighv6-5A0A0A6YWS9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ighv6-5A0A0A6YWS9 Gm23366-201ENSMUST00000175022 89 ntBASIC25.1■■□□□ 1.61
Ighv6-5A0A0A6YWS9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ighv6-5A0A0A6YWS9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ighv6-5A0A0A6YWS9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ighv6-5A0A0A6YWS9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ighv6-5A0A0A6YWS9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Ighv6-5A0A0A6YWS9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ighv6-5A0A0A6YWS9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ighv6-5A0A0A6YWS9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ighv6-5A0A0A6YWS9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ighv6-5A0A0A6YWS9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ighv6-5A0A0A6YWS9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ighv6-5A0A0A6YWS9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ighv6-5A0A0A6YWS9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.52■■□□□ 1.52
Ighv6-5A0A0A6YWS9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ighv6-5A0A0A6YWS9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.43■■□□□ 1.5
Ighv6-5A0A0A6YWS9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.41■■□□□ 1.5
Ighv6-5A0A0A6YWS9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ighv6-5A0A0A6YWS9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ighv6-5A0A0A6YWS9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Ighv6-5A0A0A6YWS9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.2■■□□□ 1.46
Ighv6-5A0A0A6YWS9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ighv6-5A0A0A6YWS9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ighv6-5A0A0A6YWS9 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.15■■□□□ 1.46
Ighv6-5A0A0A6YWS9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.08■■□□□ 1.45
Ighv6-5A0A0A6YWS9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ighv6-5A0A0A6YWS9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ighv6-5A0A0A6YWS9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.97■■□□□ 1.43
Ighv6-5A0A0A6YWS9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ighv6-5A0A0A6YWS9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
Ighv6-5A0A0A6YWS9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.9■■□□□ 1.42
Ighv6-5A0A0A6YWS9 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.87■■□□□ 1.41
Ighv6-5A0A0A6YWS9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ighv6-5A0A0A6YWS9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ighv6-5A0A0A6YWS9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ighv6-5A0A0A6YWS9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ighv6-5A0A0A6YWS9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ighv6-5A0A0A6YWS9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ighv6-5A0A0A6YWS9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.72■■□□□ 1.39
Ighv6-5A0A0A6YWS9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ighv6-5A0A0A6YWS9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Ighv6-5A0A0A6YWS9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Ighv6-5A0A0A6YWS9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ighv6-5A0A0A6YWS9 Gm25238-201ENSMUST00000174914 89 ntBASIC23.54■■□□□ 1.36
Ighv6-5A0A0A6YWS9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ighv6-5A0A0A6YWS9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ighv6-5A0A0A6YWS9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.52■■□□□ 1.35
Ighv6-5A0A0A6YWS9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Ighv6-5A0A0A6YWS9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ighv6-5A0A0A6YWS9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ighv6-5A0A0A6YWS9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.49■■□□□ 1.35
Ighv6-5A0A0A6YWS9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ighv6-5A0A0A6YWS9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ighv6-5A0A0A6YWS9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ighv6-5A0A0A6YWS9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ighv6-5A0A0A6YWS9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ighv6-5A0A0A6YWS9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
Ighv6-5A0A0A6YWS9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ighv6-5A0A0A6YWS9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ighv6-5A0A0A6YWS9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ighv6-5A0A0A6YWS9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ighv6-5A0A0A6YWS9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ighv6-5A0A0A6YWS9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.12■■□□□ 1.29
Ighv6-5A0A0A6YWS9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ighv6-5A0A0A6YWS9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ighv6-5A0A0A6YWS9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ighv6-5A0A0A6YWS9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ighv6-5A0A0A6YWS9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ighv6-5A0A0A6YWS9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.02■■□□□ 1.28
Ighv6-5A0A0A6YWS9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ighv6-5A0A0A6YWS9 Gm27325-201ENSMUST00000175467 74 ntBASIC23■■□□□ 1.27
Ighv6-5A0A0A6YWS9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Ighv6-5A0A0A6YWS9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Ighv6-5A0A0A6YWS9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Ighv6-5A0A0A6YWS9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ighv6-5A0A0A6YWS9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms