RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Tnks1bp1P58871 1720 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Igkv9-124A0A0G2JDR3 117 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 C2cd4aE9Q861 334 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ifitm7G3X9Z2 141 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm21789J3QMZ1 123 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm21870J3QPN2 123 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm21883J3QPV3 123 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Tmem95P0DJF3 176 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Srsf1Q6PDM2 248 aaKnown RBP7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Olfr498Q8VEW2 330 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Olfr1199Q8VF94 310 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 PpifQ99KR7 206 aaKnown RBP7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Zdbf2Q5SS00 2493 aaKnown RBP7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm29644A0A087WPG2 191 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Igkv6-32A0A140T8N9 115 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Col9a3A2ACT7 680 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 1700031F05RikB1AX30 191 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 B230104I21RikQ3USW4 141 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm5615Q3UW02 101 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Olfr139Q60891 315 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 H2-M10.4Q85ZW8 331 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Arl14epQ8BIX3 276 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Mrpl51Q9CPY1 128 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 EppinQ9DA01 134 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Trav4-4-dv10A0A075B651 110 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm14548E9Q1Z6 680 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Tac3P55099 116 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Spink11Q09TK7 88 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 AdipoqQ60994 247 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Zfpl1Q9DB43 310 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Slc25a15Q9WVD5 301 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Cacna1fQ9JIS7 1985 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 KcpQ3U492 1550 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Znf691Q3TDE8 283 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Hspe1Q64433 102 aaKnown RBP7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm10283Q8C3L5 117 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Nhlrc3Q8CCH2 347 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 D730048I06RikQ9CQB8 106 aa7.74□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Trav7n-5A0A075B604 112 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Zfp950A0A0U1RQ46 609 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Fam3dP97805 223 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Tmem241Q3UME2 297 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm904Q3V2L5 102 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Dcbld1Q9D4J3 503 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Lime1Q9EQR5 269 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Fgf16Q9ESL8 207 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Arpc1aQ9R0Q6 370 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Dock6Q8VDR9 2080 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Lamb2Q61292 1799 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Igkv14-100A0A0G2JG36 117 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 1700015F17RikD3YUK8 150 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm10428J3QNV7 132 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Tcrg-V1P06325 135 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Cr2P19070 1025 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Efnb1P52795 345 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 RhogP84096 191 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 RflnaQ7TS73 204 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Plppr1Q8BFZ2 325 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 4930544G11RikQ9CR99 193 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 IcosQ9WVS0 200 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Mtcl1Q3UHU5 1945 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ighv1-15A0A0A6YXA5 117 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 LtaP09225 202 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Hint1P70349 126 aaKnown RBP7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Rnf182Q8C432 247 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 QrfpQ8CE23 124 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Anapc10Q8K2H6 185 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Rnf125Q9D9R0 233 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 F8Q06194 2319 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Nhsl1Q8CAF4 1587 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ighv6-4A0A0A6YX19 119 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Rpl23P62830 140 aaKnown RBP7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 C1ql4Q4ZJM9 238 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Megf10Q6DIB5 1147 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Olfr433Q7TRV9 314 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Lypd1Q8BLC3 141 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Nrn1Q8CFV4 142 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Mbnl3Q8R003 342 aaKnown RBP7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Hyls1Q9CXX0 307 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Fam219aQ9D772 157 aa7.73□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Trav18A0A075B656 109 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Tff1Q08423 87 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Stac2Q8R1B0 408 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ssbp3Q9D032 388 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Cldn23Q9D7D7 296 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Trbv12-1A0A0B4J1H0 124 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Trbv19A0A0B4J1H4 117 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Igkv4-86A0A0G2JGE7 114 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm6793B2RXM2 351 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm42957D6RFQ2 366 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Saa3P04918 122 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Foxa3P35584 353 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Wdr83osQ6ZWX0 106 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Olfr975Q8VG91 310 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Sh2d6Q9D413 297 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 2900055J20RikQ9D6G3 140 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ankrd31A0A140LI88 1765 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Igkv4-50A0A0B4J1J0 117 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ighv9-3A0A0B4J1J5 117 aa7.72□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Igkv6-25A0A140T8N7 115 aa7.72□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms