RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 HIGD1CA8MV81 97 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 H3BVH4 76 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 RNASE3P12724 160 aaKnown RBP9.03□□□□□ -0.96
LMO3-223ENST00000540590 MIFP14174 115 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 AZU1P20160 251 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 S100A4P26447 101 aaKnown RBP9.03□□□□□ -0.96
LMO3-223ENST00000540590 CTRLP40313 264 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 ZNF415Q09FC8 603 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 DEFB121Q5J5C9 76 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 ATP5L2Q7Z4Y8 100 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 NUP35Q8NFH5 326 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 C16orf74Q96GX8 76 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 PGLYRP4Q96LB8 373 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 TPPP3Q9BW30 176 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 SSBP4Q9BWG4 385 aaPredicted RBP9.03□□□□□ -0.96
LMO3-223ENST00000540590 MDFICQ9P1T7 246 aa9.03□□□□□ -0.96
LMO3-223ENST00000540590 SNAI2O43623 268 aa9.02□□□□□ -0.97
LMO3-223ENST00000540590 ARMS2P0C7Q2 107 aa9.02□□□□□ -0.97
LMO3-223ENST00000540590 CACNG7P62955 275 aa9.02□□□□□ -0.97
LMO3-223ENST00000540590 COX19Q49B96 90 aa9.02□□□□□ -0.97
LMO3-223ENST00000540590 RASL11AQ6T310 242 aa9.02□□□□□ -0.97
LMO3-223ENST00000540590 LYZL1Q6UWQ5 148 aa9.02□□□□□ -0.97
LMO3-223ENST00000540590 C11orf72Q8NBR9 251 aa9.02□□□□□ -0.97
LMO3-223ENST00000540590 BORCS7Q96B45 105 aa9.02□□□□□ -0.97
LMO3-223ENST00000540590 C9orf85Q96MD7 179 aa9.02□□□□□ -0.97
LMO3-223ENST00000540590 YPEL4Q96NS1 127 aa9.02□□□□□ -0.97
LMO3-223ENST00000540590 TIMM8BQ9Y5J9 83 aaPredicted RBP9.02□□□□□ -0.97
LMO3-223ENST00000540590 X6R8D5 127 aa9.02□□□□□ -0.97
LMO3-223ENST00000540590 MUC21A0A0G2JKD1 596 aa9.01□□□□□ -0.97
LMO3-223ENST00000540590 MUC21A0A140T8X8 626 aa9.01□□□□□ -0.97
LMO3-223ENST00000540590 TEX48A0A1B0GUV7 120 aa9.01□□□□□ -0.97
LMO3-223ENST00000540590 SPRY2O43597 315 aa9.01□□□□□ -0.97
LMO3-223ENST00000540590 S100A8P05109 93 aa9.01□□□□□ -0.97
LMO3-223ENST00000540590 ELOBQ15370 118 aa9.01□□□□□ -0.97
LMO3-223ENST00000540590 RNASE8Q8TDE3 154 aaKnown RBP9.01□□□□□ -0.97
LMO3-223ENST00000540590 SPATA25Q9BR10 227 aa9.01□□□□□ -0.97
LMO3-223ENST00000540590 SCRT2Q9NQ03 307 aa9.01□□□□□ -0.97
LMO3-223ENST00000540590 GSN-AS1Q9NRJ2 163 aa9.01□□□□□ -0.97
LMO3-223ENST00000540590 IGHV4-4A0A075B6R2 117 aa9□□□□□ -0.97
LMO3-223ENST00000540590 SPINK4O60575 86 aa9□□□□□ -0.97
LMO3-223ENST00000540590 DAZ2Q13117 558 aaKnown RBP9□□□□□ -0.97
LMO3-223ENST00000540590 LGALS9BQ3B8N2 356 aa9□□□□□ -0.97
LMO3-223ENST00000540590 SBSPONQ8IVN8 264 aa9□□□□□ -0.97
LMO3-223ENST00000540590 SYT8Q8NBV8 401 aa9□□□□□ -0.97
LMO3-223ENST00000540590 OR11H2Q8NH07 326 aa9□□□□□ -0.97
LMO3-223ENST00000540590 OR10AG1Q8NH19 301 aa9□□□□□ -0.97
LMO3-223ENST00000540590 MRAPQ8TCY5 172 aa9□□□□□ -0.97
LMO3-223ENST00000540590 OVOL2Q9BRP0 275 aa9□□□□□ -0.97
LMO3-223ENST00000540590 RETNQ9HD89 108 aa9□□□□□ -0.97
LMO3-223ENST00000540590 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
LMO3-223ENST00000540590 TGIF2-C20orf24A0A0A6YYL0 155 aa8.99□□□□□ -0.97
LMO3-223ENST00000540590 A0A1B0GUT8 65 aa8.99□□□□□ -0.97
LMO3-223ENST00000540590 PLAC8L1A1L4L8 177 aa8.99□□□□□ -0.97
LMO3-223ENST00000540590 SNURFLB1AK76 121 aa8.99□□□□□ -0.97
LMO3-223ENST00000540590 NXPH4O95158 308 aa8.99□□□□□ -0.97
LMO3-223ENST00000540590 MRPL54Q6P161 138 aaKnown RBP8.99□□□□□ -0.97
LMO3-223ENST00000540590 ZFP82Q8N141 532 aa8.99□□□□□ -0.97
LMO3-223ENST00000540590 IL17DQ8TAD2 202 aa8.99□□□□□ -0.97
LMO3-223ENST00000540590 B9D2Q9BPU9 175 aa8.99□□□□□ -0.97
LMO3-223ENST00000540590 TM2D3Q9BRN9 247 aa8.99□□□□□ -0.97
LMO3-223ENST00000540590 PHLDA3Q9Y5J5 127 aa8.99□□□□□ -0.97
LMO3-223ENST00000540590 CIDEAO60543 219 aa8.98□□□□□ -0.97
LMO3-223ENST00000540590 NHLRC4P0CG21 123 aaPredicted RBP8.98□□□□□ -0.97
LMO3-223ENST00000540590 SSTP61278 116 aa8.98□□□□□ -0.97
LMO3-223ENST00000540590 RIGQ13278 110 aa8.98□□□□□ -0.97
LMO3-223ENST00000540590 ZMAT4Q9H898 229 aa8.98□□□□□ -0.97
LMO3-223ENST00000540590 IGHV4-28A0A0C4DH34 117 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 A0A1B0GXF2 115 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 LYRM9A8MSI8 78 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 M0R2P5 195 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 M0R381 172 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 TRGC1P0CF51 173 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 SPANXN1Q5VSR9 72 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 Q8NAQ8 132 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 FRZBQ92765 325 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 C18orf15Q96N68 181 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 C11orf68Q9H3H3 251 aaKnown RBP8.97□□□□□ -0.97
LMO3-223ENST00000540590 MSRB1Q9NZV6 116 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 NBEAL2Q6ZNJ1 2754 aa8.97□□□□□ -0.97
LMO3-223ENST00000540590 NACAE9PAV3 2078 aa8.96□□□□□ -0.97
LMO3-223ENST00000540590 COLCA2A8K830 154 aa8.96□□□□□ -0.98
LMO3-223ENST00000540590 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.96□□□□□ -0.98
LMO3-223ENST00000540590 NTF3P20783 257 aa8.96□□□□□ -0.98
LMO3-223ENST00000540590 DEFA6Q01524 100 aa8.96□□□□□ -0.98
LMO3-223ENST00000540590 SMIM15Q7Z3B0 74 aa8.96□□□□□ -0.98
LMO3-223ENST00000540590 RASL10AQ92737 203 aa8.96□□□□□ -0.98
LMO3-223ENST00000540590 KRTAP9-2Q9BYQ4 174 aa8.96□□□□□ -0.98
LMO3-223ENST00000540590 A8MWV9 139 aa8.95□□□□□ -0.98
LMO3-223ENST00000540590 MT-ND6P03923 174 aa8.95□□□□□ -0.98
LMO3-223ENST00000540590 HBBP68871 147 aa8.95□□□□□ -0.98
LMO3-223ENST00000540590 TWIST1Q15672 202 aa8.95□□□□□ -0.98
LMO3-223ENST00000540590 GATD1Q8NB37 220 aa8.95□□□□□ -0.98
LMO3-223ENST00000540590 FAM210BQ96KR6 192 aa8.95□□□□□ -0.98
LMO3-223ENST00000540590 AP1S3Q96PC3 154 aa8.95□□□□□ -0.98
LMO3-223ENST00000540590 NOP10Q9NPE3 64 aaKnown RBP8.95□□□□□ -0.98
LMO3-223ENST00000540590 MRPL16Q9NX20 251 aaKnown RBP8.95□□□□□ -0.98
LMO3-223ENST00000540590 DEFB4AO15263 64 aa8.94□□□□□ -0.98
LMO3-223ENST00000540590 CAMPP49913 170 aa8.94□□□□□ -0.98
LMO3-223ENST00000540590 EMP1P54849 157 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms