RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 C9JAW5 83 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 E9PLD3 99 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 G3V318 75 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 SMKR1H3BMG3 65 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 APOMO95445 188 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 CSN1S1P47710 185 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 CACNG7P62955 275 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 AMN1Q8IY45 258 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 OR4X2Q8NGF9 303 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 CHD6Q8TD26 2715 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 AVPP01185 164 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 CFHR3Q02985 330 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 GAGE2BQ13066 116 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 RIGQ13278 110 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 GAGE2EQ4V326 116 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 TTC32Q5I0X7 151 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 TMEM219Q86XT9 240 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 GAGE2DQ9UEU5 116 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 CLPSL1A2RUU4 121 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 H3BUX3 64 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 DEFB113Q30KQ7 82 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 USMG5Q96IX5 58 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 DUX3Q96PT4 197 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 SPANXCQ9NY87 97 aa8.87□□□□□ -0.99
SNRNP200-208ENST00000497539 ASH1LQ9NR48 2969 aaKnown RBP8.86□□□□□ -0.99
SNRNP200-208ENST00000497539 LYZL1Q6UWQ5 148 aa8.86□□□□□ -0.99
SNRNP200-208ENST00000497539 PCP2Q8IVA1 136 aa8.86□□□□□ -0.99
SNRNP200-208ENST00000497539 TRBV20-1A0A075B6N2 111 aa8.86□□□□□ -0.99
SNRNP200-208ENST00000497539 TMEM262E9PQX1 116 aa8.86□□□□□ -0.99
SNRNP200-208ENST00000497539 IGHV3-23P01764 117 aa8.86□□□□□ -0.99
SNRNP200-208ENST00000497539 NMUP48645 174 aa8.86□□□□□ -0.99
SNRNP200-208ENST00000497539 C18orf15Q96N68 181 aa8.86□□□□□ -0.99
SNRNP200-208ENST00000497539 SMAD5-AS1Q9Y6J3 95 aa8.86□□□□□ -0.99
SNRNP200-208ENST00000497539 COL12A1Q99715 3063 aa8.85□□□□□ -0.99
SNRNP200-208ENST00000497539 FAM208BQ5VWN6 2430 aa8.85□□□□□ -0.99
SNRNP200-208ENST00000497539 TMEM89A2RUT3 159 aa8.85□□□□□ -0.99
SNRNP200-208ENST00000497539 IGLV1-40P01703 118 aa8.85□□□□□ -0.99
SNRNP200-208ENST00000497539 PHLDA1Q8WV24 401 aaPredicted RBP8.85□□□□□ -0.99
SNRNP200-208ENST00000497539 AAMDCQ9H7C9 122 aa8.85□□□□□ -0.99
SNRNP200-208ENST00000497539 WNK2Q9Y3S1 2297 aa8.85□□□□□ -0.99
SNRNP200-208ENST00000497539 H3BMG7 143 aa8.85□□□□□ -0.99
SNRNP200-208ENST00000497539 BUB3O43684 328 aa8.85□□□□□ -0.99
SNRNP200-208ENST00000497539 TTTY13Q9BZ97 58 aa8.85□□□□□ -0.99
SNRNP200-208ENST00000497539 USP9XQ93008 2570 aaPredicted RBP8.85□□□□□ -0.99
SNRNP200-208ENST00000497539 IGHV4-31P0DP07 118 aa8.84□□□□□ -0.99
SNRNP200-208ENST00000497539 MRPL53Q96EL3 112 aaKnown RBP8.84□□□□□ -0.99
SNRNP200-208ENST00000497539 EDN2P20800 178 aa8.84□□□□□ -0.99
SNRNP200-208ENST00000497539 CLEC19AQ6UXS0 136 aa8.84□□□□□ -0.99
SNRNP200-208ENST00000497539 DKK2Q9UBU2 259 aa8.84□□□□□ -0.99
SNRNP200-208ENST00000497539 K7EMI3 77 aa8.83□□□□□ -1
SNRNP200-208ENST00000497539 IGFL4Q6B9Z1 124 aa8.83□□□□□ -1
SNRNP200-208ENST00000497539 SLC50A1Q9BRV3 221 aa8.83□□□□□ -1
SNRNP200-208ENST00000497539 A0A1B0GWB2 263 aa8.83□□□□□ -1
SNRNP200-208ENST00000497539 A1L4Q6 167 aa8.83□□□□□ -1
SNRNP200-208ENST00000497539 RBAKDNA6NC62 111 aa8.83□□□□□ -1
SNRNP200-208ENST00000497539 CRYGDP07320 174 aa8.83□□□□□ -1
SNRNP200-208ENST00000497539 KRTAP1-3Q8IUG1 177 aa8.83□□□□□ -1
SNRNP200-208ENST00000497539 NDUFA4O00483 81 aa8.82□□□□□ -1
SNRNP200-208ENST00000497539 GAS8-AS1O95177 125 aa8.82□□□□□ -1
SNRNP200-208ENST00000497539 TRGV3P03979 118 aa8.82□□□□□ -1
SNRNP200-208ENST00000497539 KRTAP10-9P60411 292 aa8.82□□□□□ -1
SNRNP200-208ENST00000497539 MRPL51Q4U2R6 128 aaKnown RBP8.82□□□□□ -1
SNRNP200-208ENST00000497539 RNF152Q8N8N0 203 aa8.82□□□□□ -1
SNRNP200-208ENST00000497539 KIR2DL4Q99706 377 aa8.82□□□□□ -1
SNRNP200-208ENST00000497539 PRADC1Q9BSG0 188 aa8.82□□□□□ -1
SNRNP200-208ENST00000497539 NPYP01303 97 aa8.82□□□□□ -1
SNRNP200-208ENST00000497539 SRSF2Q01130 221 aaKnown RBP8.82□□□□□ -1
SNRNP200-208ENST00000497539 GATD1Q8NB37 220 aa8.82□□□□□ -1
SNRNP200-208ENST00000497539 METTL26Q96S19 204 aa8.82□□□□□ -1
SNRNP200-208ENST00000497539 MSRB1Q9NZV6 116 aa8.82□□□□□ -1
SNRNP200-208ENST00000497539 CR1P17927 2039 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 IGKV2-40A0A087WW87 121 aaPredicted RBP8.81□□□□□ -1
SNRNP200-208ENST00000497539 IGKV2D-40P01614 121 aaPredicted RBP8.81□□□□□ -1
SNRNP200-208ENST00000497539 LY6EQ16553 131 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 DEFB112Q30KQ8 113 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 FAM104BQ5XKR9 115 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 NFE4Q86UQ8 179 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 Q8TAT8 98 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 MED13LQ71F56 2210 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 IGHV3OR16-8A0A075B7F1 116 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 CKS2P33552 79 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 EMP1P54849 157 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 ORMDL3Q8N138 153 aa8.81□□□□□ -1
SNRNP200-208ENST00000497539 SH2D1AO60880 128 aa8.8□□□□□ -1
SNRNP200-208ENST00000497539 TWIST1Q15672 202 aa8.8□□□□□ -1
SNRNP200-208ENST00000497539 PPDPFLQ8WWR9 84 aa8.8□□□□□ -1
SNRNP200-208ENST00000497539 IFI27L1Q96BM0 104 aa8.8□□□□□ -1
SNRNP200-208ENST00000497539 CRLF1O75462 422 aa8.8□□□□□ -1
SNRNP200-208ENST00000497539 LGALS9BQ3B8N2 356 aa8.8□□□□□ -1
SNRNP200-208ENST00000497539 LGALS9CQ6DKI2 356 aa8.8□□□□□ -1
SNRNP200-208ENST00000497539 Q6YL49 198 aa8.8□□□□□ -1
SNRNP200-208ENST00000497539 IGKV2D-26A0A0A0MRZ7 120 aa8.79□□□□□ -1
SNRNP200-208ENST00000497539 RNF223E7ERA6 249 aa8.79□□□□□ -1
SNRNP200-208ENST00000497539 K7ERJ3 54 aa8.79□□□□□ -1
SNRNP200-208ENST00000497539 HBDP02042 147 aa8.79□□□□□ -1
SNRNP200-208ENST00000497539 GCSHP23434 173 aa8.79□□□□□ -1
SNRNP200-208ENST00000497539 OR10J6PQ8NGY7 276 aa8.79□□□□□ -1
SNRNP200-208ENST00000497539 PRRC2AP48634 2157 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms