RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 FER1L6-AS1Q8NA97 138 aa5.97□□□□□ -1.45
SYNE1-225ENST00000481502 C9orf85Q96MD7 179 aa5.97□□□□□ -1.45
SYNE1-225ENST00000481502 C11orf68Q9H3H3 251 aaKnown RBP5.97□□□□□ -1.45
SYNE1-225ENST00000481502 RPS10P5Q9NQ39 176 aa5.97□□□□□ -1.45
SYNE1-225ENST00000481502 X6R8D5 127 aa5.97□□□□□ -1.45
SYNE1-225ENST00000481502 LYRM9A8MSI8 78 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 HIGD1CA8MV81 97 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 SNURFLB1AK76 121 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 ARMS2P0C7Q2 107 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 RNASE3P12724 160 aaKnown RBP5.96□□□□□ -1.46
SYNE1-225ENST00000481502 CTRLP40313 264 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 DEFB135Q30KP9 77 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 SBSPONQ8IVN8 264 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 LINC00528Q8N1L1 170 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 C11orf72Q8NBR9 251 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 SYT8Q8NBV8 401 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 OR11H2Q8NH07 326 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 IL17DQ8TAD2 202 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 RASL10AQ92737 203 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 FRZBQ92765 325 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 BORCS7Q96B45 105 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 SMCO4Q9NRQ5 59 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 PHLDA3Q9Y5J5 127 aa5.96□□□□□ -1.46
SYNE1-225ENST00000481502 TIMM8BQ9Y5J9 83 aaPredicted RBP5.96□□□□□ -1.46
SYNE1-225ENST00000481502 TRBV24-1A0A075B6N3 115 aa5.95□□□□□ -1.46
SYNE1-225ENST00000481502 A0A1B0GUT8 65 aa5.95□□□□□ -1.46
SYNE1-225ENST00000481502 M0R2P5 195 aa5.95□□□□□ -1.46
SYNE1-225ENST00000481502 GNRH2O43555 120 aa5.95□□□□□ -1.46
SYNE1-225ENST00000481502 NXPH4O95158 308 aa5.95□□□□□ -1.46
SYNE1-225ENST00000481502 DEFA6Q01524 100 aa5.95□□□□□ -1.46
SYNE1-225ENST00000481502 RIGQ13278 110 aa5.95□□□□□ -1.46
SYNE1-225ENST00000481502 MUC21Q5SSG8 566 aa5.95□□□□□ -1.46
SYNE1-225ENST00000481502 ZFP82Q8N141 532 aa5.95□□□□□ -1.46
SYNE1-225ENST00000481502 GTSF1Q8WW33 167 aa5.95□□□□□ -1.46
SYNE1-225ENST00000481502 NAGKQ9UJ70 344 aa5.95□□□□□ -1.46
SYNE1-225ENST00000481502 IGHV3OR16-12A0A075B7B8 117 aa5.94□□□□□ -1.46
SYNE1-225ENST00000481502 A8MWV9 139 aa5.94□□□□□ -1.46
SYNE1-225ENST00000481502 SPINK4O60575 86 aa5.94□□□□□ -1.46
SYNE1-225ENST00000481502 TRGC1P0CF51 173 aa5.94□□□□□ -1.46
SYNE1-225ENST00000481502 SPANXN1Q5VSR9 72 aa5.94□□□□□ -1.46
SYNE1-225ENST00000481502 LYZL1Q6UWQ5 148 aa5.94□□□□□ -1.46
SYNE1-225ENST00000481502 Q6ZQT7 251 aa5.94□□□□□ -1.46
SYNE1-225ENST00000481502 LINC00612Q8N6U2 182 aa5.94□□□□□ -1.46
SYNE1-225ENST00000481502 Q8NAQ8 132 aa5.94□□□□□ -1.46
SYNE1-225ENST00000481502 NUP35Q8NFH5 326 aa5.94□□□□□ -1.46
SYNE1-225ENST00000481502 MDFICQ9P1T7 246 aa5.94□□□□□ -1.46
SYNE1-225ENST00000481502 TMSB15BA0A087X1C1 80 aa5.93□□□□□ -1.46
SYNE1-225ENST00000481502 PLAC8L1A1L4L8 177 aa5.93□□□□□ -1.46
SYNE1-225ENST00000481502 GRIFINA4D1Z8 144 aa5.93□□□□□ -1.46
SYNE1-225ENST00000481502 PRB2P02812 416 aaPredicted RBP5.93□□□□□ -1.46
SYNE1-225ENST00000481502 SPART-AS1P0CW21 52 aa5.93□□□□□ -1.46
SYNE1-225ENST00000481502 HTN1P15515 57 aa5.93□□□□□ -1.46
SYNE1-225ENST00000481502 AZU1P20160 251 aa5.93□□□□□ -1.46
SYNE1-225ENST00000481502 ZNF876PQ49A33 203 aa5.93□□□□□ -1.46
SYNE1-225ENST00000481502 ZFP2Q6ZN57 461 aa5.93□□□□□ -1.46
SYNE1-225ENST00000481502 SMIM15Q7Z3B0 74 aa5.93□□□□□ -1.46
SYNE1-225ENST00000481502 GATD1Q8NB37 220 aa5.93□□□□□ -1.46
SYNE1-225ENST00000481502 GSN-AS1Q9NRJ2 163 aa5.93□□□□□ -1.46
SYNE1-225ENST00000481502 IGHV4-28A0A0C4DH34 117 aa5.92□□□□□ -1.46
SYNE1-225ENST00000481502 H3BVH4 76 aa5.92□□□□□ -1.46
SYNE1-225ENST00000481502 RHODO00212 210 aa5.92□□□□□ -1.46
SYNE1-225ENST00000481502 MT-ND6P03923 174 aa5.92□□□□□ -1.46
SYNE1-225ENST00000481502 NTF3P20783 257 aa5.92□□□□□ -1.46
SYNE1-225ENST00000481502 HBBP68871 147 aa5.92□□□□□ -1.46
SYNE1-225ENST00000481502 ELOBQ15370 118 aa5.92□□□□□ -1.46
SYNE1-225ENST00000481502 ATRAIDQ6UW56 229 aa5.92□□□□□ -1.46
SYNE1-225ENST00000481502 TMEM191AQ9H0A3 160 aa5.92□□□□□ -1.46
SYNE1-225ENST00000481502 DKK2Q9UBU2 259 aa5.92□□□□□ -1.46
SYNE1-225ENST00000481502 A0A1B0GXF2 115 aa5.91□□□□□ -1.46
SYNE1-225ENST00000481502 GZMBP10144 247 aa5.91□□□□□ -1.46
SYNE1-225ENST00000481502 FAM3BP58499 235 aaPredicted RBP5.91□□□□□ -1.46
SYNE1-225ENST00000481502 SLAQ13239 276 aa5.91□□□□□ -1.46
SYNE1-225ENST00000481502 OR10AG1Q8NH19 301 aa5.91□□□□□ -1.46
SYNE1-225ENST00000481502 PGLYRP4Q96LB8 373 aa5.91□□□□□ -1.46
SYNE1-225ENST00000481502 YPEL4Q96NS1 127 aa5.91□□□□□ -1.46
SYNE1-225ENST00000481502 AP1S3Q96PC3 154 aa5.91□□□□□ -1.46
SYNE1-225ENST00000481502 GNB1LQ9BYB4 327 aa5.91□□□□□ -1.46
SYNE1-225ENST00000481502 EDA2RQ9HAV5 297 aa5.91□□□□□ -1.46
SYNE1-225ENST00000481502 NOP10Q9NPE3 64 aaKnown RBP5.91□□□□□ -1.46
SYNE1-225ENST00000481502 TRAV4A0A0B4J268 109 aa5.9□□□□□ -1.46
SYNE1-225ENST00000481502 RS1O15537 224 aa5.9□□□□□ -1.46
SYNE1-225ENST00000481502 PPP1R17O96001 155 aa5.9□□□□□ -1.46
SYNE1-225ENST00000481502 HLA-DQA1P01909 254 aa5.9□□□□□ -1.46
SYNE1-225ENST00000481502 TWIST1Q15672 202 aa5.9□□□□□ -1.46
SYNE1-225ENST00000481502 POM121L12Q8N7R1 296 aa5.9□□□□□ -1.46
SYNE1-225ENST00000481502 TPPP3Q9BW30 176 aa5.9□□□□□ -1.46
SYNE1-225ENST00000481502 DPH3P1Q9H4G8 78 aa5.9□□□□□ -1.46
SYNE1-225ENST00000481502 TRGV1A0A0A0MS02 117 aa5.89□□□□□ -1.47
SYNE1-225ENST00000481502 M0R381 172 aa5.89□□□□□ -1.47
SYNE1-225ENST00000481502 PPBPP02775 128 aa5.89□□□□□ -1.47
SYNE1-225ENST00000481502 SMIM17P0DL12 118 aa5.89□□□□□ -1.47
SYNE1-225ENST00000481502 FAM222AQ5U5X8 452 aa5.89□□□□□ -1.47
SYNE1-225ENST00000481502 FAM210BQ96KR6 192 aa5.89□□□□□ -1.47
SYNE1-225ENST00000481502 MUC4Q99102 2169 aa5.89□□□□□ -1.47
SYNE1-225ENST00000481502 TRGV2A0A075B6R0 118 aa5.88□□□□□ -1.47
SYNE1-225ENST00000481502 H7C1H1 209 aa5.88□□□□□ -1.47
SYNE1-225ENST00000481502 ATP5G1P05496 136 aa5.88□□□□□ -1.47
SYNE1-225ENST00000481502 CRYGDP07320 174 aa5.88□□□□□ -1.47
SYNE1-225ENST00000481502 RAB4BP61018 213 aa5.88□□□□□ -1.47
SYNE1-225ENST00000481502 DAD1P61803 113 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms