RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 PRR15Q8IV56 129 aa0.1□□□□□ -2.39
RNU6-39P-201ENST00000384344 NEK7Q8TDX7 302 aa0.1□□□□□ -2.39
RNU6-39P-201ENST00000384344 SPRR2FQ96RM1 72 aa0.1□□□□□ -2.39
RNU6-39P-201ENST00000384344 GPX7Q96SL4 187 aaPredicted RBP0.1□□□□□ -2.39
RNU6-39P-201ENST00000384344 PAIP2Q9BPZ3 127 aaKnown RBP0.1□□□□□ -2.39
RNU6-39P-201ENST00000384344 NUP98P52948 1817 aa0.1□□□□□ -2.39
RNU6-39P-201ENST00000384344 HUWE1Q7Z6Z7 4374 aaKnown RBP0.09□□□□□ -2.39
RNU6-39P-201ENST00000384344 MYLKQ15746 1914 aa0.09□□□□□ -2.39
RNU6-39P-201ENST00000384344 CUL7Q14999 1698 aa0.09□□□□□ -2.39
RNU6-39P-201ENST00000384344 K7ERJ3 54 aa0.09□□□□□ -2.4
RNU6-39P-201ENST00000384344 PDE6GP18545 87 aa0.09□□□□□ -2.4
RNU6-39P-201ENST00000384344 HSD11B1P28845 292 aa0.09□□□□□ -2.4
RNU6-39P-201ENST00000384344 CAV3P56539 151 aa0.09□□□□□ -2.4
RNU6-39P-201ENST00000384344 SPINK13Q1W4C9 94 aa0.09□□□□□ -2.4
RNU6-39P-201ENST00000384344 KRTAP20-2Q3LI61 65 aa0.09□□□□□ -2.4
RNU6-39P-201ENST00000384344 ZNF609O15014 1411 aa0.09□□□□□ -2.4
RNU6-39P-201ENST00000384344 ABCC5O15440 1437 aa0.09□□□□□ -2.4
RNU6-39P-201ENST00000384344 PREX2Q70Z35 1606 aa0.09□□□□□ -2.4
RNU6-39P-201ENST00000384344 TNXBP22105 4242 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 PREX1Q8TCU6 1659 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 RREB1Q92766 1687 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 FANCMQ8IYD8 2048 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 MYO5AQ9Y4I1 1855 aaKnown RBP0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 PEG3Q9GZU2 1588 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 PRORSD1PA6NEY8 169 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 CST7O76096 145 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 S100A6P06703 90 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 RPL35P42766 123 aaKnown RBP0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 HBBP68871 147 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 MSMO1Q15800 293 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 SNCBQ16143 134 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 C1orf140Q5VVS0 124 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 AP1S3Q96PC3 154 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 NABP2Q9BQ15 211 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 EFCAB11Q9BUY7 163 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 SH3BGRL3Q9H299 93 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 TPRKBQ9Y3C4 175 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 ZGRF1Q86YA3 2104 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 NKTRP30414 1462 aaKnown RBP0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 AKAP6Q13023 2319 aa0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 CDK13Q14004 1512 aaKnown RBP0.08□□□□□ -2.4
RNU6-39P-201ENST00000384344 DNAH6Q9C0G6 4158 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 ODAMA1E959 279 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 A6NN06 94 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 MRPS36P82909 103 aaKnown RBP0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 NUP35Q8NFH5 326 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 OR13C6PQ8NH95 151 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 CHMP6Q96FZ7 201 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 MCEEQ96PE7 176 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 LIMD2Q9BT23 127 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 OR2H1Q9GZK4 316 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 LPAR5Q9H1C0 372 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 NAT8BQ9UHF3 227 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 A2MP01023 1474 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 CAMSAP2Q08AD1 1489 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 TEX14Q8IWB6 1497 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 MLH3Q9UHC1 1453 aa0.07□□□□□ -2.4
RNU6-39P-201ENST00000384344 CASZ1Q86V15 1759 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 SMG6Q86US8 1419 aaKnown RBP0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 ADGRL3Q9HAR2 1447 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 IGHV3-30P01768 117 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 MT-ND6P03923 174 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 IGHV3-30-5P0DP03 117 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 FKBP1CQ5VVH2 108 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 DHRS4L2Q6PKH6 230 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 C10orf99Q6UWK7 81 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 PHF5AQ7RTV0 110 aaKnown RBP0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 OR4C12Q96R67 309 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 LRTM1Q9HBL6 345 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 LAMTOR3Q9UHA4 124 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 ASB4Q9Y574 426 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 FLGP20930 4061 aaPredicted RBP0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 BCORL1Q5H9F3 1711 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 DOCK4Q8N1I0 1966 aa0.06□□□□□ -2.4
RNU6-39P-201ENST00000384344 ERVK-7P63135 1459 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 C1orf167Q5SNV9 1468 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 MARF1Q9Y4F3 1742 aaKnown RBP0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 URB1O60287 2271 aaKnown RBP0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 MAP3K1Q13233 1512 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 NISCHQ9Y2I1 1504 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 H3BQV1 296 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 E2F6O75461 281 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 IFNA1P01562 189 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 NEDD8Q15843 81 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 RTL8BQ17RB0 113 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 HACD4Q5VWC8 232 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 XAF1Q6GPH4 301 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 OR4B1Q8NGF8 309 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 RTL8AQ9BWD3 113 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 UGGT1Q9NYU2 1555 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 VPS13BQ7Z7G8 4022 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 CAMSAP1Q5T5Y3 1602 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 KNTC1P50748 2209 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 DNAH17Q9UFH2 4485 aa0.05□□□□□ -2.4
RNU6-39P-201ENST00000384344 LRRC37A2A6NM11 1700 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 SPTBP11277 2137 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 DNAH3Q8TD57 4116 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 F5P12259 2224 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 C5orf58C9J3I9 102 aa0.04□□□□□ -2.4
RNU6-39P-201ENST00000384344 RPS3P23396 243 aaKnown RBP eCLIP0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms