RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Tbx21Q9JKD8 530 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Chst4Q9R1I1 388 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Ccpg1osV9GXK1 122 aa18.25■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr466E9Q2B9 308 aa18.24■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Gm21974F6W3F3 119 aa18.24■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Fgfbp1O70514 251 aa18.24■□□□□ 0.51
Scn1b-201ENSMUST00000098548 ErhP84089 104 aa18.24■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Rhox10Q4TU83 196 aa18.24■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Wdr83osQ6ZWX0 106 aa18.24■□□□□ 0.51
Scn1b-201ENSMUST00000098548 9430097D07RikQ8BS47 195 aa18.24■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr816Q8VFU2 312 aa18.24■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Mettl9Q9EPL4 318 aa18.24■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Tpsb2P21845 276 aa18.23■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Psg27Q497W2 474 aa18.23■□□□□ 0.51
Scn1b-201ENSMUST00000098548 TpppQ7TQD2 218 aaKnown RBP18.23■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr1394Q8VET2 312 aa18.23■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr786Q8VFH8 312 aa18.23■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Errfi1Q99JZ7 461 aa18.23■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Pxmp4Q9JJW0 212 aa18.23■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Ighv14-2A0A075B5R7 117 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Trbv19A0A0B4J1H4 117 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Inafm1E9PV59 130 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Erdr1J3QMM0 206 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 P04212 136 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Cox7a2P48771 83 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Defa11P50709 85 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 MyocosQ3UWS6 143 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Arrdc5Q497K5 325 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr513Q8VFZ3 309 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 HaghQ99KB8 309 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Prss1Q9Z1R9 246 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Chd6A3KFM7 2711 aa18.22■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Ighv1-19A0A0A6YWX0 117 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Frrs1lB1AXV0 293 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr747E9PXH6 313 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Ifitm7G3X9Z2 141 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Spint5J3KMK8 105 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Gm10665K7N6B7 321 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Ppt1O88531 306 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 P04219 140 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Ifna5P07349 189 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 PpyP10601 100 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 FmodP50608 376 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr1178Q7TR20 323 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 H2-M10.6Q85ZW5 330 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Elovl5Q8BHI7 299 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Vstm2aQ8R0A6 236 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr154Q9QY00 318 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Rgs21V9GXQ3 152 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Ighv5-17A0A075B5R1 117 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Cyb561d1A2AE42 229 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Fgf7P36363 194 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Id3P41133 119 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Atp5g2P56383 146 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Usf2Q64705 346 aaKnown RBP18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Tgfbr1Q64729 503 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Il22ra2Q80XF5 230 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr112Q8C0S2 320 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Fam216bQ8CC14 138 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Olfr223Q8VF69 319 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Glo1Q9CPU0 184 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Tmem107Q9CPV0 140 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 4930583I09RikQ9D2E3 102 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 Btbd17Q9DB72 478 aa18.21■□□□□ 0.51
Scn1b-201ENSMUST00000098548 9530053A07RikE9PVG8 2581 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Med13lQ6JPI3 2207 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Olfr465-ps1A0A0U1RPZ4 315 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Gm12355A2A4X6 163 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 E430018J23RikE9PZQ8 461 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Srsf3P84104 164 aaKnown RBP18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Olfr323Q5NCD0 323 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Olfr1371Q7TQT7 311 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Olfr132Q7TRI8 313 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Tmem100Q9CQG9 134 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Ap5s1Q9D742 170 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 AY761184Q9D848 116 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Scp2d1Q9DAH1 156 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Hspb9Q9DAM3 168 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Fbxl17Q9QZN1 701 aa18.2■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Olfr1291-ps1A0A286YE47 326 aa18.19■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Esp6A8R0U0 136 aa18.19■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Ifna4P07351 186 aa18.19■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Spam1P48794 512 aa18.19■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Mcrip1Q3UGS4 97 aa18.19■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Nup62Q63850 526 aa18.19■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Vmn1r62Q8R2C0 300 aa18.19■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Etfrf1Q91V16 86 aa18.19■□□□□ 0.5
Scn1b-201ENSMUST00000098548 H2al3Q9D4U4 128 aa18.19■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Ctxnd1A0A1B0GST9 59 aa18.18■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Gm21732J3QM79 361 aa18.18■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Gm21921J3QNB5 361 aa18.18■□□□□ 0.5
Scn1b-201ENSMUST00000098548 CryzP47199 331 aa18.18■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Trim63Q38HM4 350 aa18.18■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Gm5771Q792Y9 245 aa18.18■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Ercc8Q8CFD5 397 aa18.18■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Olfr860Q8VFF7 317 aa18.18■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Gp2Q9D733 531 aa18.18■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Spata25Q9DA57 226 aa18.18■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Supt4h1bQ9Z199 117 aa18.18■□□□□ 0.5
Scn1b-201ENSMUST00000098548 AcanQ61282 2132 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms