RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 CCL3L1P16619 93 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 DTX1Q86Y01 620 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 DYNAPQ8N1N2 210 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 MAPKAPK5-AS1Q8N8E1 139 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 DSCR8Q96T75 97 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 AGPAT4-IT1Q9H0P7 198 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 WISP1O95388 367 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 IGHV3-33P01772 117 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 P0C879 139 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 GATA1P15976 413 aaPredicted RBP4.04□□□□□ -1.76
SCN11A-202ENST00000444237 CLEC19AQ6UXS0 136 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 TIMM17AQ99595 171 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 MLST8Q9BVC4 326 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 U3KQK5 164 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 BRWD1Q9NSI6 2320 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 SHANK1Q9Y566 2161 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 IGHV3OR16-8A0A075B7F1 116 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 ADARB2-AS1A8MUL3 147 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 USP17L23D6RBM5 183 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 FAM201AQ5SY85 155 aa4.04□□□□□ -1.76
SCN11A-202ENST00000444237 SDIM1Q6ZPB5 146 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 FANCD2OSQ96PS1 177 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 HEATR1Q9H583 2144 aaKnown RBP4.03□□□□□ -1.76
SCN11A-202ENST00000444237 C15orf65H3BRN8 121 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 WT1-ASQ06250 92 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 Q6ZQT7 251 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 NFE4Q86UQ8 179 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 GGNQ86UU5 652 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 A0A0J9YY99 117 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 BUB3O43684 328 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 TIMM17BO60830 172 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 UBE2E1P51965 193 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 UBE2D3P61077 147 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 UBE2D2P62837 147 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 DIAPH2-AS1Q14236 149 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 PATE2Q6UY27 113 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 PRR19A6NJB7 356 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 J3QLI3 93 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 COX7A2LO14548 114 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 SP5Q6BEB4 398 aaPredicted RBP4.03□□□□□ -1.76
SCN11A-202ENST00000444237 DAND5Q8N907 189 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 MPLKIPQ8TAP9 179 aa4.03□□□□□ -1.76
SCN11A-202ENST00000444237 IGKV1D-17A0A075B6S4 117 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 TRBV7-7A0A0K0K1E9 115 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 RPL35AP18077 110 aaKnown RBP4.02□□□□□ -1.77
SCN11A-202ENST00000444237 ZNF833PQ6ZTB9 187 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 ZNRF2Q8NHG8 242 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 ZNF524Q96C55 264 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 CEP290O15078 2479 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 PLXND1Q9Y4D7 1925 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 A0A087WWL8 130 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 SRRM4A7MD48 611 aaKnown RBP4.02□□□□□ -1.77
SCN11A-202ENST00000444237 LYRM9A8MSI8 78 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 F8WDY8 70 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 IGLV2-14P01704 120 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1-2P23083 117 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 MBD3L2Q8NHZ7 208 aaPredicted RBP4.02□□□□□ -1.77
SCN11A-202ENST00000444237 OBSL1O75147 1896 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 URB1-AS1Q96HZ7 61 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 ZNF106Q9H2Y7 1883 aaKnown RBP4.02□□□□□ -1.77
SCN11A-202ENST00000444237 F5P12259 2224 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 ESPL1Q14674 2120 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 TRAV23DV6A0A075B6W5 121 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 C16orf97H3BN30 126 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 TRIAP1O43715 76 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 TRGV3P03979 118 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 DAZ2Q13117 558 aaKnown RBP4.02□□□□□ -1.77
SCN11A-202ENST00000444237 IGFL4Q6B9Z1 124 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 DAZ4Q86SG3 579 aaKnown RBP4.02□□□□□ -1.77
SCN11A-202ENST00000444237 DAZ1Q9NQZ3 744 aaKnown RBP4.02□□□□□ -1.77
SCN11A-202ENST00000444237 DAZ3Q9NR90 486 aaKnown RBP4.02□□□□□ -1.77
SCN11A-202ENST00000444237 THADAQ6YHU6 1953 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 INS-IGF2F8WCM5 200 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 IGKV3-20P01619 116 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 IGHG3P01860 377 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 DEFB104AQ8WTQ1 72 aa4.02□□□□□ -1.77
SCN11A-202ENST00000444237 TRBV7-1A0A0A6YYK4 115 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 MIAQ16674 131 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 NEXN-AS1Q8NBZ9 246 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 LENEPQ9Y5L5 61 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 H3BQ85 93 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1-69P01742 117 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 Q6JHZ5 121 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 MRPL53Q96EL3 112 aaKnown RBP4.01□□□□□ -1.77
SCN11A-202ENST00000444237 MSRB1Q9NZV6 116 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 NUP210Q8TEM1 1887 aaPredicted RBP4.01□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1-3A0A0C4DH29 117 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV3-30P01768 117 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV3-30-5P0DP03 117 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 UBE2D1P51668 147 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 NDPQ00604 133 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 CFHR4Q92496 578 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 UPK3BQ9BT76 320 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 PLXNA2O75051 1894 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 LST1O00453 97 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 CCL21O00585 134 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 TRBV12-3P01733 135 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 ELANEP08246 267 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 CRYGAP11844 174 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 RPL36AP83881 106 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms