RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 PCSK5Q92824 1860 aa10.98□□□□□ -0.65
DUSP28-202ENST00000405954 A4D1N5 150 aa10.97□□□□□ -0.65
DUSP28-202ENST00000405954 M0R1B8 84 aa10.97□□□□□ -0.65
DUSP28-202ENST00000405954 TNFRSF13BO14836 293 aaPredicted RBP10.97□□□□□ -0.65
DUSP28-202ENST00000405954 THAP8Q8NA92 274 aa10.97□□□□□ -0.65
DUSP28-202ENST00000405954 RNF125Q96EQ8 232 aa10.97□□□□□ -0.65
DUSP28-202ENST00000405954 TTTY12Q9BZ98 90 aa10.97□□□□□ -0.65
DUSP28-202ENST00000405954 IGHV3OR16-13A0A075B7E8 117 aa10.97□□□□□ -0.65
DUSP28-202ENST00000405954 IGHV3-74A0A0B4J1X5 117 aa10.97□□□□□ -0.65
DUSP28-202ENST00000405954 CDX4O14627 284 aaPredicted RBP10.97□□□□□ -0.65
DUSP28-202ENST00000405954 DUSP14O95147 198 aaKnown RBP10.96□□□□□ -0.65
DUSP28-202ENST00000405954 POU2AF1Q16633 256 aa10.96□□□□□ -0.65
DUSP28-202ENST00000405954 ORMDL2Q53FV1 153 aa10.96□□□□□ -0.65
DUSP28-202ENST00000405954 FAM90A1Q86YD7 464 aa10.96□□□□□ -0.65
DUSP28-202ENST00000405954 LINC00527Q9UJ94 153 aa10.96□□□□□ -0.65
DUSP28-202ENST00000405954 SPTA1P02549 2419 aa10.96□□□□□ -0.65
DUSP28-202ENST00000405954 LRBAP50851 2863 aa10.96□□□□□ -0.65
DUSP28-202ENST00000405954 SRRM5B3KS81 715 aa10.96□□□□□ -0.66
DUSP28-202ENST00000405954 MRPS12O15235 138 aaKnown RBP10.96□□□□□ -0.66
DUSP28-202ENST00000405954 IGLV2-11P01706 119 aa10.96□□□□□ -0.66
DUSP28-202ENST00000405954 C17orf58Q2M2W7 97 aa10.96□□□□□ -0.66
DUSP28-202ENST00000405954 TRAV41A0A0B4J266 112 aa10.96□□□□□ -0.66
DUSP28-202ENST00000405954 SS18L1O75177 396 aaPredicted RBP10.96□□□□□ -0.66
DUSP28-202ENST00000405954 NDUFA7O95182 113 aa10.96□□□□□ -0.66
DUSP28-202ENST00000405954 C2orf66Q6UXQ4 117 aa10.96□□□□□ -0.66
DUSP28-202ENST00000405954 TMEM167AQ8TBQ9 72 aa10.96□□□□□ -0.66
DUSP28-202ENST00000405954 RNF7Q9UBF6 113 aa10.96□□□□□ -0.66
DUSP28-202ENST00000405954 SPTBN4Q9H254 2564 aa10.95□□□□□ -0.66
DUSP28-202ENST00000405954 TIMM23O14925 209 aa10.95□□□□□ -0.66
DUSP28-202ENST00000405954 TNFAIP6P98066 277 aaPredicted RBP10.95□□□□□ -0.66
DUSP28-202ENST00000405954 PMS2CLQ68D20 193 aa10.95□□□□□ -0.66
DUSP28-202ENST00000405954 PRR25Q96S07 402 aa10.95□□□□□ -0.66
DUSP28-202ENST00000405954 IGHV3-23P01764 117 aa10.95□□□□□ -0.66
DUSP28-202ENST00000405954 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
DUSP28-202ENST00000405954 ZMAT4Q9H898 229 aa10.95□□□□□ -0.66
DUSP28-202ENST00000405954 U3KQK5 164 aa10.95□□□□□ -0.66
DUSP28-202ENST00000405954 CREBBPQ92793 2442 aa10.95□□□□□ -0.66
DUSP28-202ENST00000405954 F5H768 121 aa10.94□□□□□ -0.66
DUSP28-202ENST00000405954 ABCA4P78363 2273 aa10.94□□□□□ -0.66
DUSP28-202ENST00000405954 CECR9P0C854 216 aa10.94□□□□□ -0.66
DUSP28-202ENST00000405954 UBE2D3P61077 147 aa10.94□□□□□ -0.66
DUSP28-202ENST00000405954 UBE2D2P62837 147 aa10.94□□□□□ -0.66
DUSP28-202ENST00000405954 C1orf162Q8NEQ5 155 aaPredicted RBP10.94□□□□□ -0.66
DUSP28-202ENST00000405954 B9A039 149 aa10.94□□□□□ -0.66
DUSP28-202ENST00000405954 TRGV3P03979 118 aa10.94□□□□□ -0.66
DUSP28-202ENST00000405954 ARHGAP32A7KAX9 2087 aa10.94□□□□□ -0.66
DUSP28-202ENST00000405954 TRAV25A0A0B4J276 109 aa10.93□□□□□ -0.66
DUSP28-202ENST00000405954 IGHV1-2P23083 117 aa10.93□□□□□ -0.66
DUSP28-202ENST00000405954 ERCC8Q13216 396 aa10.93□□□□□ -0.66
DUSP28-202ENST00000405954 ZNF474Q6S9Z5 364 aaPredicted RBP10.93□□□□□ -0.66
DUSP28-202ENST00000405954 SIGLEC15Q6ZMC9 328 aa10.93□□□□□ -0.66
DUSP28-202ENST00000405954 TRGV5A0A0B4J1U4 118 aa10.93□□□□□ -0.66
DUSP28-202ENST00000405954 SPRY2O43597 315 aa10.93□□□□□ -0.66
DUSP28-202ENST00000405954 CCL8P80075 99 aa10.93□□□□□ -0.66
DUSP28-202ENST00000405954 RASL10AQ92737 203 aa10.93□□□□□ -0.66
DUSP28-202ENST00000405954 CEP295Q9C0D2 2601 aa10.93□□□□□ -0.66
DUSP28-202ENST00000405954 IGLC6P0CF74 106 aa10.93□□□□□ -0.66
DUSP28-202ENST00000405954 IL11RAQ14626 422 aa10.93□□□□□ -0.66
DUSP28-202ENST00000405954 ACACAQ13085 2346 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 IGHV3-66A0A0C4DH42 116 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 PRR30Q53SZ7 412 aaPredicted RBP10.92□□□□□ -0.66
DUSP28-202ENST00000405954 RUSC1-AS1Q66K80 236 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 Q6Q795 121 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 COL12A1Q99715 3063 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 TRACP01848 142 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 SHANK2-AS3Q9BTD1 123 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 ARRDC1-AS1Q9H2J1 176 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 PTPRBP23467 1997 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 RBAKDNA6NC62 111 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 M0R2P5 195 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 COX7A1P24310 79 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 UBE2D1P51668 147 aa10.92□□□□□ -0.66
DUSP28-202ENST00000405954 PHLDA3Q9Y5J5 127 aa10.91□□□□□ -0.66
DUSP28-202ENST00000405954 AKAP13Q12802 2813 aa10.91□□□□□ -0.66
DUSP28-202ENST00000405954 C3orf22Q8N5N4 141 aa10.91□□□□□ -0.66
DUSP28-202ENST00000405954 SMIM2Q9BVW6 85 aa10.91□□□□□ -0.66
DUSP28-202ENST00000405954 CTSZQ9UBR2 303 aa10.91□□□□□ -0.66
DUSP28-202ENST00000405954 OTOGLQ3ZCN5 2332 aa10.91□□□□□ -0.66
DUSP28-202ENST00000405954 IGHV3-49A0A0A0MS15 119 aa10.9□□□□□ -0.66
DUSP28-202ENST00000405954 CCL17Q92583 94 aa10.9□□□□□ -0.66
DUSP28-202ENST00000405954 NOTCH3Q9UM47 2321 aa10.9□□□□□ -0.66
DUSP28-202ENST00000405954 LYPD1Q8N2G4 141 aa10.9□□□□□ -0.66
DUSP28-202ENST00000405954 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.9□□□□□ -0.66
DUSP28-202ENST00000405954 ZNF80P51504 273 aaPredicted RBP10.9□□□□□ -0.66
DUSP28-202ENST00000405954 RNF185Q96GF1 192 aa10.9□□□□□ -0.66
DUSP28-202ENST00000405954 ODF3Q96PU9 254 aa10.9□□□□□ -0.66
DUSP28-202ENST00000405954 TMEM14CQ9P0S9 112 aa10.9□□□□□ -0.66
DUSP28-202ENST00000405954 LGALS9O00182 355 aa10.89□□□□□ -0.67
DUSP28-202ENST00000405954 UQCRQO14949 82 aa10.89□□□□□ -0.67
DUSP28-202ENST00000405954 HRCT1Q6UXD1 115 aa10.89□□□□□ -0.67
DUSP28-202ENST00000405954 Q6ZS46 218 aa10.89□□□□□ -0.67
DUSP28-202ENST00000405954 C14orf178Q8N769 122 aaPredicted RBP10.89□□□□□ -0.67
DUSP28-202ENST00000405954 CITED2Q99967 270 aaPredicted RBP10.89□□□□□ -0.67
DUSP28-202ENST00000405954 ZZEF1O43149 2961 aa10.89□□□□□ -0.67
DUSP28-202ENST00000405954 TRBV10-2A0A0K0K1G8 114 aa10.89□□□□□ -0.67
DUSP28-202ENST00000405954 hADV29S1A0JD25 119 aa10.89□□□□□ -0.67
DUSP28-202ENST00000405954 SUMO2P61956 95 aaKnown RBP10.89□□□□□ -0.67
DUSP28-202ENST00000405954 PAPPA-AS1Q5QFB9 102 aa10.89□□□□□ -0.67
DUSP28-202ENST00000405954 ADARB2-AS1A8MUL3 147 aa10.89□□□□□ -0.67
DUSP28-202ENST00000405954 SRSF2Q01130 221 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms