RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 HrasQ61411 189 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ms4a6dQ99N07 247 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 VsirQ9D659 308 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Vstm5Q9D806 199 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Arpc1bQ9WV32 372 aaKnown RBP12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Zfp971A2BFG8 470 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm14288E9Q9W0 88 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Cldn34c3J3QJW5 233 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Cldn34c2J3QNM1 233 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr1474Q7TQQ8 314 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Cldn34c1Q8K193 234 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Rbmxl1Q91VM5 388 aaKnown RBP12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Siglec12Q91Y57 467 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Zcchc10Q9CX48 178 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Rab1bQ9D1G1 201 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ep300B2RWS6 2412 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 E030018B13RikJ3QMS9 113 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Fgf7P36363 194 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Slc25a29Q8BL03 306 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Actl6bQ99MR0 426 aa12.89□□□□□ -0.35
Trim39-203ENSMUST00000113706 Trav7n-5A0A075B604 112 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm20532G3UXR8 106 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 P18530 117 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Klf14Q19A41 325 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 KncnQ307W7 124 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Znrd1Q791N7 123 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr1412Q8VET3 321 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 GrhprQ91Z53 328 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ighv8-2A0A0A6YW58 119 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Vmn1r113G3UWI8 307 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm8677K9J7G9 307 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Cd27P41272 250 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Atp5g2P56383 146 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Pdlim4P70271 330 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gpr183Q3U6B2 357 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 SlaQ60898 281 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr1042Q7TR81 313 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr1183Q8VFF8 303 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Rwdd3Q8VIL2 267 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ndufa2Q9CQ75 99 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Mrpl41Q9CQN7 135 aaKnown RBP12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ash1lQ99MY8 2958 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr196E9PYP4 309 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm2174F6ZVF2 133 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Foxh1O88621 401 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Chrna7P49582 502 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ubald1Q6P3B2 176 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr58Q7TRF6 309 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Foxj2Q9ES18 565 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ccl28Q9JIL2 130 aa12.88□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm21616B6ZB74 166 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 Klk1b22P15948 259 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 Oprk1P33534 380 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 C1ql4Q4ZJM9 238 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 Fbxo24Q9D417 589 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 Fam208bQ5DTT3 2382 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 Trbv13-3A0A0B4J1H2 113 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 Frrs1lB1AXV0 293 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 P01725 110 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 Cdkn1aP39689 159 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 CebpdQ00322 268 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 Nabp2Q8R2Y9 212 aa12.87□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ighv1-26A0A075B5V0 117 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Bloc1s1O55102 125 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Sssca1P56873 199 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 NrgnP60761 78 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Plppr2Q8VCY8 343 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Stpg1Q9D2F5 341 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 2200002J24RikQ9D807 110 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ighv1-7A0A075B5T7 117 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ighv1-19A0A0A6YWX0 117 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr912A0A1L1SSS5 310 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ovol3D3YYM0 189 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm20825J3QM67 227 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 P01790 122 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Ssty2Q149W4 227 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm21394Q497R7 227 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm20854Q62461 227 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Scgb2b24Q7M747 112 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 9030612E09RikQ8CE20 140 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr266Q8VFC3 316 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm45800A0A1B0GT24 152 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Tmem8bB1AWJ5 472 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 E430018J23RikE9PZQ8 461 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Cd74P04441 279 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 CrygcQ61597 174 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr1178Q7TR20 323 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Cdc34Q8CFI2 235 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Olfr1295Q8VF48 312 aa12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Plrg1Q922V4 513 aaKnown RBP12.86□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm20773A0A0A6YXW2 232 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm20807A0A0A6YXX7 232 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm20873J3QMQ9 232 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm20795J3QP49 232 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm21310J3QQ23 232 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 PspnO70300 156 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Rps10P63325 165 aaKnown RBP12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Fam3dP97805 223 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Gm21440Q3TTD8 232 aa12.85□□□□□ -0.35
Trim39-203ENSMUST00000113706 Arrdc5Q497K5 325 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms