RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Med13Q5SWW4 2171 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Ighv9-3A0A0B4J1J5 117 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 H2al1jA2BFR3 109 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Tmem92B7ZWI3 162 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Olfr251E9Q891 316 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Gm4133K9J7G6 307 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Efnb3O35393 340 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Cst7O89098 144 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 P01630 113 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Spink11Q09TK7 88 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Olfr153Q7TR48 307 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Ankrd33Q8BXP5 385 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Alkbh6Q8K2U2 238 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Mrpl42Q9CPV3 142 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Hs3st3b1Q9QZS6 390 aa10.65□□□□□ -0.7
Nup88-203ENSMUST00000108531 Ighv8-9A0A0G2JET1 119 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Mettl8A2AUU0 281 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm6034E9Q101 117 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm19684G3UZ45 117 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Tcf21O35437 179 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Rpl31P62900 125 aaKnown RBP10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Il31Q6EAL8 163 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Prss3Q792Z0 246 aaKnown RBP10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr1371Q7TQT7 311 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr1246Q7TQZ6 314 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Wdr31Q9JHB4 367 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Trav17A0A075B655 113 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Trav6d-3A0A075B6B3 112 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Tnfsf12O54907 249 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Pate4Q09098 99 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm16686Q3UMN9 131 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Trav6-3Q5R1E6 112 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Pygo2Q80V76 405 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 PaxxQ8K0Y7 205 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr513Q8VFZ3 309 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Znrf1Q91V17 227 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 SmagpQ99KC7 97 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gp2Q9D733 531 aa10.64□□□□□ -0.71
Nup88-203ENSMUST00000108531 Ighv6-3A0A075B5T2 118 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Stfa1P35175 97 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Rab7aP51150 207 aaKnown RBP10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 SelenotP62342 195 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Fam3dP97805 223 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Sp9Q64HY3 484 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Rph3alQ768S4 302 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr1472Q7TQQ9 314 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr1408Q8VG32 310 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Higd1bQ99JY6 98 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Chchd1Q9CQA6 118 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 FibinQ9CQS3 217 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Eny2Q9JIX0 101 aaKnown RBP10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Crim1Q9JLL0 1037 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Cbln1Q9R171 193 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Pcnx2Q5DU28 2122 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 D830044I16RikA0A1D5RM53 117 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm21732J3QM79 361 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm21921J3QNB5 361 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Cd96Q3U0X8 602 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Tnfsf15Q5UBV8 252 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Slc25a48Q8BW66 306 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Foxj2Q9ES18 565 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gpr35Q9ES90 307 aa10.63□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gfra3O35118 397 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 S100a10P08207 97 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 C5ar1P30993 351 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Dynlrb1P62627 96 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 MiaQ61865 130 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Klf17Q8CFA7 341 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr1475Q8VEV6 314 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr1413Q8VGU3 323 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Immp1lQ9CQU8 166 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 GgctQ9D7X8 188 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Prune2Q52KR3 3084 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Rdh16O54909 317 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Tnfrsf17O88472 185 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Fgf5P15656 264 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Evi2aP20934 223 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Il3raP26952 396 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Nabp2Q8R2Y9 212 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr76Q8VFV2 317 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Eaf1Q9D4C5 268 aa10.62□□□□□ -0.71
Nup88-203ENSMUST00000108531 Psg18B2RSG7 476 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 P04946 108 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Nutf2P61971 127 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Q6DIA7 600 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 H2-M10.4Q85ZW8 331 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Plppr2Q8VCY8 343 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gtf3aQ8VHT7 364 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 CenpmQ9CQA0 180 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Nicn1Q9CQM0 213 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Mettl9Q9EPL4 318 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Gm12728V9GX31 77 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Flg2Q2VIS4 2362 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Ighv5-17A0A075B5R1 117 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Tcrg-V4A0A0B4J1J8 138 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr1458A0A1L1SSD5 307 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 BsgP18572 389 aaKnown RBP10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Commd9Q8K2Q0 198 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 Olfr346Q8VGJ7 309 aa10.61□□□□□ -0.71
Nup88-203ENSMUST00000108531 B3gnt9Q8VI16 399 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 83.5 ms