RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 P04940 107 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 P04941 107 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 LalbaP29752 143 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Trav6-3Q5R1E6 112 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Kcnip4Q6PHZ8 250 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Prss37Q9DAA4 237 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Ly96Q9JHF9 160 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Ighv1-19A0A0A6YWX0 117 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 P01674 108 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Rph3alQ768S4 302 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Lrrc20Q8CI70 184 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Fam110aQ8R184 296 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Zcchc10Q9CX48 178 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Btbd17Q9DB72 478 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Eny2Q9JIX0 101 aaKnown RBP12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Vamp5Q9Z2P8 102 aa12.35□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Gm28171A0A087WQ19 227 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Gm14124A2AU83 715 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Mtco2P00405 227 aaKnown RBP12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Prop1P97458 223 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 StumQ0VBF8 141 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Ubald1Q6P3B2 176 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Fam222bQ6P539 562 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Ankrd55Q8BLD6 626 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 H2al3Q9D4U4 128 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Cnot1Q6ZQ08 2375 aaKnown RBP12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Ncor1Q60974 2453 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Myo15bI7HPW8 3033 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Olfr872E9PVW2 323 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Ren2P00796 401 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 AmelxP63277 210 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Nabp2Q8R2Y9 212 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 FibinQ9CQS3 217 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Mlst8Q9DCJ1 326 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Cacna1iE9Q7P2 2199 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Dscaml1Q4VA61 2053 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Olfr779E9PUS9 130 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Gm21244J3QK38 227 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Efnb3O35393 340 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 CideaO70302 217 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Ren1P06281 402 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Gstp1P19157 210 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Q0VG62 139 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 MiaQ61865 130 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Mpv17lQ99MS3 194 aa12.34□□□□□ -0.43
Nkx3-1-201ENSMUST00000022646 Olfr898L7N1Z5 316 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Tnfsf11O35235 316 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Mtnd6P03925 172 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Lyz1P17897 148 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 CapgP24452 352 aaKnown RBP12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 BC100530Q497J0 97 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Kcnmb2Q9CZM9 235 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Mettl9Q9EPL4 318 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Opn3Q9WUK7 400 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Tpt1P63028 172 aaKnown RBP12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Sfrp2P97299 295 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 CenptQ3TJM4 515 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Wfdc8Q4KUS1 273 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Klre1Q8CJC7 226 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Pnpla3Q91WW7 413 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Lmntd1Q9D4C1 413 aa12.33□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 P01806 116 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 P06323 132 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm10645Q3UPY1 145 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Trav6-2Q5R1I4 113 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Ube2d2bQ6ZWY6 147 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Q80VP5 184 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Znf146Q8BQN6 292 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Ankrd33Q8BXP5 385 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Trav17A0A075B655 113 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm35060A0A140LIV7 231 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Actl6bQ99MR0 426 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Tmem183Q9JJB9 375 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Olfr624F8VQI7 308 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 RhobP62746 196 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm10803Q3TZS6 135 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Btf3Q64152 204 aaKnown RBP12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm4894Q8CA09 118 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Plppr2Q8VCY8 343 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Olfr1330Q8VEY6 315 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Olfr715Q8VG49 315 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Icam4Q9ERM2 262 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Kcnip2Q9JJ69 270 aa12.32□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 9130204L05RikG3UWB8 92 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 ApcsP12246 224 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Dlx1Q64317 255 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Tmem167aQ9CR64 72 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 4930412O13RikQ9D5M9 106 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Cml1Q9JIZ0 222 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gpa33Q9JKA5 319 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Zfhx3Q61329 3726 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 KalrnA2CG49 2964 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Olfr1458A0A1L1SSD5 307 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Mettl8A2AUU0 281 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Zcchc24B2RVL6 241 aaKnown RBP12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm21732J3QM79 361 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm21921J3QNB5 361 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Zfp941Q3URY5 674 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Vmn1r222Q8R269 308 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 RfxapQ8VCG9 231 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 75.2 ms