RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 1700084M14RikB1AT01 78 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Foxi3E0CZH3 425 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 NgfP01139 241 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Ptbp1P17225 527 aaKnown RBP15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Olfr1371Q7TQT7 311 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Dppa1Q810Y7 116 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Megf9Q8BH27 600 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Ighv8-9A0A0G2JET1 119 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Olfr1118A0A0J9YUE7 307 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 H2al1jA2BFR3 109 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Zfp867E9Q2M4 473 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Efnb3O35393 340 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Rdh16O54909 317 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Mtnd6P03925 172 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Fam3dP97805 223 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Immp2lQ8BPT6 175 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Olfr513Q8VFZ3 309 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 CenpmQ9CQA0 180 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Tmem178aQ9CZ16 297 aa15.41■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Trbv3A0A0A6YYE2 117 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Cldn34c3J3QJW5 233 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Cldn34c2J3QNM1 233 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 C5ar1P30993 351 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Rab7aP51150 207 aaKnown RBP15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Vwc2Q8C8N3 324 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Cldn34c1Q8K193 234 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Ms4a6bQ99N09 244 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Olfr624F8VQI7 308 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Col8a2P25318 699 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Zfp941Q3URY5 674 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Olfr1102Q8VES2 324 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Pbp2Q8VIN1 187 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 Frem1Q684R7 2191 aa15.4■□□□□ 0.06
Shkbp1-201ENSMUST00000003857 P04940 107 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 P04941 107 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Folr2Q05685 251 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Gm10334Q792Y8 246 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Smim19Q80ZU4 107 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Fam110aQ8R184 296 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Olfr76Q8VFV2 317 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Cldn34c4A2ANA3 212 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Prss32E9Q409 334 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Rnf212F6TQD1 307 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Olfr191L7N1Z8 309 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Wnt5bP22726 359 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 RhobP62746 196 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Rpl31P62900 125 aaKnown RBP15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Q80VP5 184 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Rln3Q8CHK2 141 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Plppr2Q8VCY8 343 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Olfr770Q8VGC2 311 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 FibinQ9CQS3 217 aa15.39■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Trav5-1A0A075B5Z7 114 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Trav17A0A075B655 113 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Mettl8A2AUU0 281 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Ypel3P61237 119 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Loxl1P97873 607 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Tctn2Q2MV57 700 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Znf691Q3TDE8 283 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Olfr1246Q7TQZ6 314 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Mbnl2Q8C181 373 aaKnown RBP15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Scgb1b27Q91WB5 92 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Urm1Q9D2P4 101 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Eaf1Q9D4C5 268 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Ighv5-17A0A075B5R1 117 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 9830107B12RikD3Z5D6 160 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Gm21732J3QM79 361 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Gm21921J3QNB5 361 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 BC100530Q497J0 97 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 MiaQ61865 130 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Olfr58Q7TRF6 309 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 C330021F23RikQ8C7T0 141 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Ido2Q8R0V5 405 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Nabp2Q8R2Y9 212 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Olfr1184Q8VG86 311 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Tmem225Q9D9S2 230 aa15.38■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 DscamQ9ERC8 2013 aa15.37■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 P01788 123 aa15.37■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Vamp3P63024 103 aa15.37■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Q8VC23 124 aa15.37■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Gpr35Q9ES90 307 aa15.37■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Rgs11Q9Z2H1 443 aa15.37■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Gm12728V9GX31 77 aa15.37■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Gm12666A2AMD0 254 aaKnown RBP15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Fam222bQ6P539 562 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Olfr1472Q7TQQ9 314 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Slc25a48Q8BW66 306 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 6030452D12RikQ8CD33 222 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Klf17Q8CFA7 341 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Olfr1408Q8VG32 310 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Lamp5Q9D387 280 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 4931428L18RikQ9D4S9 127 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Olfr1458A0A1L1SSD5 307 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Ly6c1P0CW02 131 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Il3raP26952 396 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Cdkn1bP46414 197 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Mbd3l2Q3UXB0 228 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 CrygcQ61597 174 aa15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Ndufv3Q8BK30 104 aaKnown RBP15.36■□□□□ 0.05
Shkbp1-201ENSMUST00000003857 Gm4894Q8CA09 118 aa15.36■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 79.5 ms