RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 POU6F1Q14863 301 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 FKBP1CQ5VVH2 108 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 DHRS4L2Q6PKH6 230 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 CARD19Q96LW7 228 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 OR4C12Q96R67 309 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 EFCAB11Q9BUY7 163 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 OR2H1Q9GZK4 316 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 SH3BGRL3Q9H299 93 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 PROK2Q9HC23 129 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 LYRM2Q9NU23 88 aaPredicted RBP-0.38□□□□□ -2.47
CASC4-210ENST00000559550 CACNA1CQ13936 2221 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 CAMSAP1Q5T5Y3 1602 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 DSPPQ9NZW4 1301 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 TENM4Q6N022 2769 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 RTL9Q8NET4 1388 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 NBDYA0A0U1RRE5 68 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 SPINK1P00995 79 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 APOA2P02652 100 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 MT-ND6P03923 174 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 CSN2P05814 226 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 EVI2AP22794 236 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 FXYD3Q14802 87 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 CCL4L1Q8NHW4 92 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 GRPEL2Q8TAA5 225 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 PBDC1Q9BVG4 233 aa-0.39□□□□□ -2.47
CASC4-210ENST00000559550 CAMSAP2Q08AD1 1489 aa-0.4□□□□□ -2.47
CASC4-210ENST00000559550 FABP4P15090 132 aa-0.4□□□□□ -2.47
CASC4-210ENST00000559550 RTL8BQ17RB0 113 aa-0.4□□□□□ -2.47
CASC4-210ENST00000559550 Q5BKY6 102 aa-0.4□□□□□ -2.47
CASC4-210ENST00000559550 CEP19Q96LK0 163 aa-0.4□□□□□ -2.47
CASC4-210ENST00000559550 RTL8AQ9BWD3 113 aa-0.4□□□□□ -2.47
CASC4-210ENST00000559550 OTORQ9NRC9 128 aa-0.4□□□□□ -2.47
CASC4-210ENST00000559550 ABCA4P78363 2273 aa-0.4□□□□□ -2.47
CASC4-210ENST00000559550 C3orf85A0A1B0GTC6 90 aa-0.41□□□□□ -2.48
CASC4-210ENST00000559550 LOC101927531A0A1B0GV80 90 aa-0.41□□□□□ -2.48
CASC4-210ENST00000559550 MFSD11O43934 449 aa-0.41□□□□□ -2.48
CASC4-210ENST00000559550 ATP5HO75947 161 aa-0.41□□□□□ -2.48
CASC4-210ENST00000559550 SNRPD3P62318 126 aaKnown RBP-0.41□□□□□ -2.48
CASC4-210ENST00000559550 MRPS36P82909 103 aaKnown RBP-0.41□□□□□ -2.48
CASC4-210ENST00000559550 HACD4Q5VWC8 232 aa-0.41□□□□□ -2.48
CASC4-210ENST00000559550 C5orf56Q8N8D9 126 aa-0.41□□□□□ -2.48
CASC4-210ENST00000559550 NUP35Q8NFH5 326 aa-0.41□□□□□ -2.48
CASC4-210ENST00000559550 DIRC1Q969H9 104 aa-0.41□□□□□ -2.48
CASC4-210ENST00000559550 HMCN2Q8NDA2 5059 aa-0.41□□□□□ -2.48
CASC4-210ENST00000559550 CACNA1AO00555 2505 aa-0.42□□□□□ -2.48
CASC4-210ENST00000559550 TMEM210A6NLX4 147 aa-0.42□□□□□ -2.48
CASC4-210ENST00000559550 GYPBP06028 91 aa-0.42□□□□□ -2.48
CASC4-210ENST00000559550 PPP1R2P41236 205 aa-0.42□□□□□ -2.48
CASC4-210ENST00000559550 LTC4SQ16873 150 aa-0.42□□□□□ -2.48
CASC4-210ENST00000559550 DEFB132Q7Z7B7 95 aa-0.42□□□□□ -2.48
CASC4-210ENST00000559550 GINS3Q9BRX5 216 aa-0.42□□□□□ -2.48
CASC4-210ENST00000559550 KIAA1107Q9UPP5 1409 aa-0.42□□□□□ -2.48
CASC4-210ENST00000559550 KMT2CQ8NEZ4 4911 aaKnown RBP-0.42□□□□□ -2.48
CASC4-210ENST00000559550 RBBP6Q7Z6E9 1792 aaKnown RBP-0.42□□□□□ -2.48
CASC4-210ENST00000559550 CELSR2Q9HCU4 2923 aa-0.43□□□□□ -2.48
CASC4-210ENST00000559550 KPNA4O00629 521 aaPredicted RBP-0.43□□□□□ -2.48
CASC4-210ENST00000559550 TMED2Q15363 201 aa-0.43□□□□□ -2.48
CASC4-210ENST00000559550 IZUMO2Q6UXV1 221 aa-0.43□□□□□ -2.48
CASC4-210ENST00000559550 VMO1Q7Z5L0 202 aa-0.43□□□□□ -2.48
CASC4-210ENST00000559550 OR5AK2Q8NH90 309 aa-0.43□□□□□ -2.48
CASC4-210ENST00000559550 NEK7Q8TDX7 302 aa-0.43□□□□□ -2.48
CASC4-210ENST00000559550 AP1S3Q96PC3 154 aa-0.43□□□□□ -2.48
CASC4-210ENST00000559550 MRPL35Q9NZE8 188 aaKnown RBP-0.43□□□□□ -2.48
CASC4-210ENST00000559550 ABCA2Q9BZC7 2435 aa-0.43□□□□□ -2.48
CASC4-210ENST00000559550 ABCA1O95477 2261 aa-0.43□□□□□ -2.48
CASC4-210ENST00000559550 MUC2Q02817 5179 aa-0.43□□□□□ -2.48
CASC4-210ENST00000559550 PIK3C2AO00443 1686 aa-0.43□□□□□ -2.48
CASC4-210ENST00000559550 FXYD1O00168 92 aa-0.44□□□□□ -2.48
CASC4-210ENST00000559550 IFNA1P01562 189 aa-0.44□□□□□ -2.48
CASC4-210ENST00000559550 TRACP01848 142 aa-0.44□□□□□ -2.48
CASC4-210ENST00000559550 ARF6P62330 175 aa-0.44□□□□□ -2.48
CASC4-210ENST00000559550 MRPS25P82663 173 aaKnown RBP-0.44□□□□□ -2.48
CASC4-210ENST00000559550 OR13C6PQ8NH95 151 aa-0.44□□□□□ -2.48
CASC4-210ENST00000559550 CLEC2BQ92478 149 aa-0.44□□□□□ -2.48
CASC4-210ENST00000559550 CIB3Q96Q77 187 aaPredicted RBP-0.44□□□□□ -2.48
CASC4-210ENST00000559550 LRTM1Q9HBL6 345 aa-0.44□□□□□ -2.48
CASC4-210ENST00000559550 IL20Q9NYY1 176 aa-0.44□□□□□ -2.48
CASC4-210ENST00000559550 WNK2Q9Y3S1 2297 aa-0.44□□□□□ -2.48
CASC4-210ENST00000559550 A0A1W2PPB8 328 aa-0.45□□□□□ -2.48
CASC4-210ENST00000559550 KIR3DP1A8MWS1 328 aa-0.45□□□□□ -2.48
CASC4-210ENST00000559550 TCTEX1D1Q8N7M0 179 aa-0.45□□□□□ -2.48
CASC4-210ENST00000559550 OR4B1Q8NGF8 309 aa-0.45□□□□□ -2.48
CASC4-210ENST00000559550 BORCS8Q96FH0 119 aa-0.45□□□□□ -2.48
CASC4-210ENST00000559550 MCEEQ96PE7 176 aa-0.45□□□□□ -2.48
CASC4-210ENST00000559550 MRPL36Q9P0J6 103 aaKnown RBP-0.45□□□□□ -2.48
CASC4-210ENST00000559550 COMMD3Q9UBI1 195 aa-0.45□□□□□ -2.48
CASC4-210ENST00000559550 STAB1Q9NY15 2570 aa-0.46□□□□□ -2.48
CASC4-210ENST00000559550 LRP2P98164 4655 aa-0.46□□□□□ -2.48
CASC4-210ENST00000559550 LOC107984156A0A0G2JMH3 177 aa-0.46□□□□□ -2.48
CASC4-210ENST00000559550 H3BQV1 296 aa-0.46□□□□□ -2.48
CASC4-210ENST00000559550 GLRXP35754 106 aa-0.46□□□□□ -2.48
CASC4-210ENST00000559550 NDUFA6P56556 154 aa-0.46□□□□□ -2.48
CASC4-210ENST00000559550 GNG3P63215 75 aa-0.46□□□□□ -2.48
CASC4-210ENST00000559550 ARL17AQ8IVW1 177 aa-0.46□□□□□ -2.48
CASC4-210ENST00000559550 SMIM20Q8N5G0 67 aa-0.46□□□□□ -2.48
CASC4-210ENST00000559550 TMEM229BQ8NBD8 167 aa-0.46□□□□□ -2.48
CASC4-210ENST00000559550 FGD6Q6ZV73 1430 aa-0.47□□□□□ -2.48
CASC4-210ENST00000559550 TNXBP22105 4242 aa-0.47□□□□□ -2.48
CASC4-210ENST00000559550 ESPL1Q14674 2120 aa-0.47□□□□□ -2.48
CASC4-210ENST00000559550 BBIP1A8MTZ0 92 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms