RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 TJP1Q07157 1748 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 AFDNP55196 1824 aaKnown RBP3.84□□□□□ -1.79
NUP54-210ENST00000510884 WDR87Q6ZQQ6 2873 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 MYO10Q9HD67 2058 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 TRAV2A0A0B4J234 112 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 IGHV1-24A0A0C4DH33 117 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 PGPA6NDG6 321 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 SDCBPO00560 298 aaPredicted RBP3.84□□□□□ -1.79
NUP54-210ENST00000510884 SYNGR2O43760 224 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 EPPINO95925 133 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 HLA-DQA1P01909 254 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 ERCC8Q13216 396 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 TMEM52BQ4KMG9 183 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 CEND1Q8N111 149 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 ZCCHC24Q8N2G6 241 aaKnown RBP3.84□□□□□ -1.79
NUP54-210ENST00000510884 LINC01600Q96MT4 127 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 CMC2Q9NRP2 79 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 RBM12B-AS1Q9P1G2 102 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 ANAPC10Q9UM13 185 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 KCNE3Q9Y6H6 103 aa3.84□□□□□ -1.79
NUP54-210ENST00000510884 CD163L1Q9NR16 1453 aa3.84□□□□□ -1.8
NUP54-210ENST00000510884 C4AP0C0L4 1744 aa3.84□□□□□ -1.8
NUP54-210ENST00000510884 C4BP0C0L5 1744 aa3.84□□□□□ -1.8
NUP54-210ENST00000510884 RLFQ13129 1914 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 TNRC6AQ8NDV7 1962 aaKnown RBP3.83□□□□□ -1.8
NUP54-210ENST00000510884 HELZ2Q9BYK8 2649 aaKnown RBP3.83□□□□□ -1.8
NUP54-210ENST00000510884 IGLV4-3A0A075B6K6 122 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 KLF18A0A0U1RQI7 1052 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 UBE2L5PA0A1B0GUS4 154 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 C8orf87E5RJ46 101 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 F6UB75 175 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 CCL24O00175 119 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 OR1I1O60431 355 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 APCSP02743 223 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 CD55P08174 381 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 HOXB7P09629 217 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 MYCNOSP40205 109 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 LIM2P55344 173 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 CCL8P80075 99 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 ELOCQ15369 112 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 C12orf73Q69YU5 71 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 LGALS9CQ6DKI2 356 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 ATP5L2Q7Z4Y8 100 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 SBSPONQ8IVN8 264 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 ZNF645Q8N7E2 425 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 TYMSOSQ8TAI1 123 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 LRRC29Q8WV35 223 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 TM2D3Q9BRN9 247 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 CHCHD5Q9BSY4 110 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 DDX60Q8IY21 1712 aaKnown RBP3.83□□□□□ -1.8
NUP54-210ENST00000510884 ARFGEF2Q9Y6D5 1785 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 CITO14578 2027 aa3.83□□□□□ -1.8
NUP54-210ENST00000510884 ZZEF1O43149 2961 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 CCDC88CQ9P219 2028 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 KIF26AQ9ULI4 1882 aaPredicted RBP3.82□□□□□ -1.8
NUP54-210ENST00000510884 ITGB4P16144 1822 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 A0A1B0GXF2 115 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 NXPH4O95158 308 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 C1QAP02745 245 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 TCRAP04437 139 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 CXCL8P10145 99 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 COL8A2P25067 703 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 CSN1S1P47710 185 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 FAM222AQ5U5X8 452 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 Q6P435 159 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 VN1R4Q7Z5H5 301 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 WDR86Q86TI4 376 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 SLC22A24Q8N4F4 322 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 CLDND2Q8NHS1 167 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 FAM57AQ8TBR7 257 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 SLC25A38Q96DW6 304 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 FAM19A4Q96LR4 140 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 CHAC1Q9BUX1 264 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 SELENOKQ9Y6D0 94 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 ARL2-SNX15V9GYD0 113 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 FER1L5A0AVI2 2057 aa3.82□□□□□ -1.8
NUP54-210ENST00000510884 DMDP11532 3685 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 SMG1Q96Q15 3661 aaKnown RBP3.81□□□□□ -1.8
NUP54-210ENST00000510884 DMXL1Q9Y485 3027 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 IGLV3-22A0A075B6J6 115 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 TRBV27A0A0K0K1C4 114 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 M0R129 80 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 CD7P09564 240 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 SSR2P43308 183 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 SMIM11AP58511 58 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 TMEM155Q4W5P6 130 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 TMEM170BQ5T4T1 132 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 NOXRED1Q6NXP6 359 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 C2orf91Q6ZV80 131 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 C6orf201Q7Z4U5 140 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 TSKUQ8WUA8 353 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 TRGV9Q99603 122 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 SMIM7Q9BQ49 75 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 Q9HAA7 133 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 CELA1Q9UNI1 258 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 MYO18AQ92614 2054 aaKnown RBP3.81□□□□□ -1.8
NUP54-210ENST00000510884 MICAL3Q7RTP6 2002 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 LAMB2P55268 1798 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 COL4A5P29400 1685 aa3.81□□□□□ -1.8
NUP54-210ENST00000510884 NUP205Q92621 2012 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms