RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 F5O88783 2183 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm8797A0A0A6YW67 77 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm37240E9QAY5 252 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Tspan15F7BWT7 294 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Pitx3O35160 302 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Klk1b22P15948 259 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 P2ry1P49650 373 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Uba52P62984 128 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr147Q60886 317 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Zfp92Q62396 488 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Neil3Q8K203 606 aaKnown RBP7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr187Q8VEX6 308 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr129Q8VEY1 330 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr1279Q8VF38 313 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr1183Q8VFF8 303 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 PpifQ99KR7 206 aaKnown RBP7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Tmem167aQ9CR64 72 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Prss22Q9ER10 306 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Prpf8Q99PV0 2335 aaKnown RBP7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 AsmtD3KU66 387 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Lgals9O08573 353 aaKnown RBP7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Pax1P09084 446 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 LtaP09225 202 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Oprk1P33534 380 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Hist1h1aP43275 213 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Lmo4P61969 165 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Npy4rQ61041 375 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Nabp2Q8R2Y9 212 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr1099Q8VG37 312 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr362Q8VGV7 317 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Rab29Q91YQ1 204 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Cotl1Q9CQI6 142 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Sft2d3Q9CSV6 209 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Tlnrd1Q9ERE8 362 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Col7a1Q63870 2944 aa7.06□□□□□ -1.28
Trim39-201ENSMUST00000042717 Celsr2Q9R0M0 2920 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm21778A0A087WNP8 232 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 H60bB1B212 251 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Eid2bE9Q2Y0 151 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 E030018B13RikJ3QMS9 113 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Smad7O35253 426 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 P01796 113 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 P01797 113 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 P01799 113 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ighv3-6P18531 116 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Hes1P35428 282 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Dlx4P70436 240 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Prrc1Q3UPH1 443 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 HrasQ61411 189 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Usf2Q64705 346 aaKnown RBP7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Morn2Q6UL01 79 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Tmem212Q8C6V3 187 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr279Q8VFD8 310 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr303Q8VFP0 319 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Med28Q920D3 178 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Fam96bQ9D187 163 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 RetnlaQ9EP95 111 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 9530002B09RikQ9EPV7 135 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Trem3Q9JKE1 183 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Fbp1Q9QXD6 338 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Akap6E9Q9K8 2307 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Npffr1E9Q468 432 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm10665K7N6B7 321 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gosr1O88630 250 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ifna6P07350 189 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gnb1P62874 340 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Adora3Q61618 319 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Pttg1ipQ8R143 174 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Vmn1r26Q8R2D7 339 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Mrpl51Q9CPY1 128 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ociad1Q9CRD0 247 aaKnown RBP7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Xrcc3Q9CXE6 349 aa7.05□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr1532-ps1A0A0R4J8U2 307 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Zfp114B2RRA8 586 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr707K7N662 307 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Slc25a17O70579 307 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 P04942 107 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 ShbgP97497 403 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Gm9Q3UKW5 162 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ldlrad2Q3V0V0 142 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr1299Q7TQX5 312 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Commd1Q8K4M5 188 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 OtosQ8R448 89 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Olfr508Q8VG42 310 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Rab40cQ8VHQ4 281 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Snx18Q91ZR2 614 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Dram1Q9DC58 238 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Abca1P41233 2261 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 DysfQ9ESD7 2090 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 A0A286YDM5 308 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ovol3D3YYM0 189 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Rabl2E9Q9D5 223 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Zfp764E9QAP1 431 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Ifna2P01573 190 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Prss2P07146 246 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Cdk2P97377 346 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Fam220aQ3ZN08 260 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Tmem51Q99LG1 249 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 Znhit3Q9CQK1 151 aa7.04□□□□□ -1.28
Trim39-201ENSMUST00000042717 RprmQ9JJ72 109 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms