Protein–RNA interactions for Protein: Q8K4M5

Commd1, COMM domain-containing protein 1, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd1Q8K4M5 Gm25239-201ENSMUST00000174915 86 ntBASIC32,07■■■□□ 2,72
Commd1Q8K4M5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29,65■■■□□ 2,34
Commd1Q8K4M5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29,35■■■□□ 2,29
Commd1Q8K4M5 Gm15042-201ENSMUST00000120212 883 ntBASIC28,02■■■□□ 2,08
Commd1Q8K4M5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27,84■■■□□ 2,05
Commd1Q8K4M5 Gm24109-201ENSMUST00000175489 103 ntBASIC27,77■■■□□ 2,04
Commd1Q8K4M5 Gm15045-201ENSMUST00000117359 883 ntBASIC27,3■■□□□ 1,96
Commd1Q8K4M5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27,28■■□□□ 1,96
Commd1Q8K4M5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27,24■■□□□ 1,95
Commd1Q8K4M5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27,14■■□□□ 1,94
Commd1Q8K4M5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27,09■■□□□ 1,93
Commd1Q8K4M5 Gm23366-201ENSMUST00000175022 89 ntBASIC26,86■■□□□ 1,89
Commd1Q8K4M5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26,78■■□□□ 1,88
Commd1Q8K4M5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
Commd1Q8K4M5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26,67■■□□□ 1,86
Commd1Q8K4M5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26,67■■□□□ 1,86
Commd1Q8K4M5 Psd-208ENSMUST00000224556 2034 ntBASIC26,41■■□□□ 1,82
Commd1Q8K4M5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
Commd1Q8K4M5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,92■■□□□ 1,74
Commd1Q8K4M5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25,92■■□□□ 1,74
Commd1Q8K4M5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Commd1Q8K4M5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25,72■■□□□ 1,71
Commd1Q8K4M5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25,72■■□□□ 1,71
Commd1Q8K4M5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25,7■■□□□ 1,7
Commd1Q8K4M5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25,68■■□□□ 1,7
Commd1Q8K4M5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Commd1Q8K4M5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Commd1Q8K4M5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Commd1Q8K4M5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Commd1Q8K4M5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25,43■■□□□ 1,66
Commd1Q8K4M5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Commd1Q8K4M5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Commd1Q8K4M5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25,32■■□□□ 1,64
Commd1Q8K4M5 Gm25238-201ENSMUST00000174914 89 ntBASIC25,28■■□□□ 1,64
Commd1Q8K4M5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25,25■■□□□ 1,63
Commd1Q8K4M5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25,25■■□□□ 1,63
Commd1Q8K4M5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25,17■■□□□ 1,62
Commd1Q8K4M5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25,17■■□□□ 1,62
Commd1Q8K4M5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Commd1Q8K4M5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25,08■■□□□ 1,61
Commd1Q8K4M5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25,07■■□□□ 1,6
Commd1Q8K4M5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24,95■■□□□ 1,58
Commd1Q8K4M5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24,94■■□□□ 1,58
Commd1Q8K4M5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24,92■■□□□ 1,58
Commd1Q8K4M5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24,91■■□□□ 1,58
Commd1Q8K4M5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24,89■■□□□ 1,58
Commd1Q8K4M5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24,86■■□□□ 1,57
Commd1Q8K4M5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24,78■■□□□ 1,56
Commd1Q8K4M5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24,73■■□□□ 1,55
Commd1Q8K4M5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24,72■■□□□ 1,55
Commd1Q8K4M5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24,72■■□□□ 1,55
Commd1Q8K4M5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,71■■□□□ 1,55
Commd1Q8K4M5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24,64■■□□□ 1,54
Commd1Q8K4M5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24,63■■□□□ 1,53
Commd1Q8K4M5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24,61■■□□□ 1,53
Commd1Q8K4M5 Gm27325-201ENSMUST00000175467 74 ntBASIC24,52■■□□□ 1,52
Commd1Q8K4M5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24,5■■□□□ 1,51
Commd1Q8K4M5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24,48■■□□□ 1,51
Commd1Q8K4M5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24,38■■□□□ 1,49
Commd1Q8K4M5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24,37■■□□□ 1,49
Commd1Q8K4M5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24,37■■□□□ 1,49
Commd1Q8K4M5 Gm25262-201ENSMUST00000174934 133 ntBASIC24,37■■□□□ 1,49
Commd1Q8K4M5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24,33■■□□□ 1,48
Commd1Q8K4M5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24,3■■□□□ 1,48
Commd1Q8K4M5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24,28■■□□□ 1,48
Commd1Q8K4M5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24,25■■□□□ 1,47
Commd1Q8K4M5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Commd1Q8K4M5 Gm42596-201ENSMUST00000196305 1958 ntBASIC24,2■■□□□ 1,46
Commd1Q8K4M5 Rab21-202ENSMUST00000218831 843 ntBASIC24,16■■□□□ 1,46
Commd1Q8K4M5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24,15■■□□□ 1,46
Commd1Q8K4M5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24,14■■□□□ 1,46
Commd1Q8K4M5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24,1■■□□□ 1,45
Commd1Q8K4M5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24,03■■□□□ 1,44
Commd1Q8K4M5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24,01■■□□□ 1,43
Commd1Q8K4M5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23,98■■□□□ 1,43
Commd1Q8K4M5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23,98■■□□□ 1,43
Commd1Q8K4M5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,97■■□□□ 1,43
Commd1Q8K4M5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23,94■■□□□ 1,42
Commd1Q8K4M5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23,91■■□□□ 1,42
Commd1Q8K4M5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23,89■■□□□ 1,42
Commd1Q8K4M5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23,89■■□□□ 1,41
Commd1Q8K4M5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,87■■□□□ 1,41
Commd1Q8K4M5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23,83■■□□□ 1,4
Commd1Q8K4M5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23,8■■□□□ 1,4
Commd1Q8K4M5 Gm26115-201ENSMUST00000175605 87 ntBASIC23,79■■□□□ 1,4
Commd1Q8K4M5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23,78■■□□□ 1,4
Commd1Q8K4M5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23,76■■□□□ 1,39
Commd1Q8K4M5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23,76■■□□□ 1,39
Commd1Q8K4M5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23,73■■□□□ 1,39
Commd1Q8K4M5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23,73■■□□□ 1,39
Commd1Q8K4M5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23,73■■□□□ 1,39
Commd1Q8K4M5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23,71■■□□□ 1,39
Commd1Q8K4M5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23,71■■□□□ 1,39
Commd1Q8K4M5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23,7■■□□□ 1,38
Commd1Q8K4M5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23,68■■□□□ 1,38
Commd1Q8K4M5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23,67■■□□□ 1,38
Commd1Q8K4M5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23,66■■□□□ 1,38
Commd1Q8K4M5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23,65■■□□□ 1,38
Commd1Q8K4M5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23,63■■□□□ 1,37
Commd1Q8K4M5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23,62■■□□□ 1,37
Retrieved 100 of 76,532 protein–RNA pairs in 12,8 ms