RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 TRBV7-6A0A0J9YX20 115 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 LOC285095A0A1B0GVY8 99 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 H3BT86 120 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 APOC4-APOC2K7ER74 178 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 M0R378 163 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 FFAR1O14842 300 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 APOMO95445 188 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 APOC2P02655 101 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 CD7P09564 240 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 C3orf79P0CE67 100 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 RBMY1CP0DJD4 496 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 INAFM2P0DMQ5 153 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 COL8A2P25067 703 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 FAUP35544 74 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 KRTDAPP60985 99 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 DAD1P61803 113 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 LGALS9BQ3B8N2 356 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 HES3Q5TGS1 186 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 FAM222AQ5U5X8 452 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 C2orf91Q6ZV80 131 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 ATP5L2Q7Z4Y8 100 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 VN1R4Q7Z5H5 301 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 TEN1Q86WV5 123 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 SBSPONQ8IVN8 264 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 TOMM5Q8N4H5 51 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 OR9G1Q8NH87 305 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 FAM213BQ8TBF2 198 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 STAG3L4Q8TBR4 150 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 RBMXL1Q96E39 390 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 DSCR8Q96T75 97 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 RABAC1Q9UI14 185 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 ANAPC10Q9UM13 185 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 KCNE3Q9Y6H6 103 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 SERP1Q9Y6X1 66 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 ITGB4P16144 1822 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 MICAL3Q7RTP6 2002 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 ADGBQ8N7X0 1667 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 TSPOAP1O95153 1857 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 ITSN1Q15811 1721 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 ALPK3Q96L96 1907 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 NRKQ7Z2Y5 1582 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 CEP170BQ9Y4F5 1589 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 CCDC88CQ9P219 2028 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 DOCK5Q9H7D0 1870 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 CFAP43Q8NDM7 1665 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 TRGV5A0A0B4J1U4 118 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 A0A0G2JRQ6 117 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 TRBV7-7A0A0K0K1E9 115 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 hADV29S1A0JD25 119 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 A8MWV9 139 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 C4orf51C9J302 202 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 NDUFC2-KCTD14E9PQ53 114 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 C17orf112F2Z3M2 114 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 INS-IGF2F8WCM5 200 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 OR1I1O60431 355 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 SMIM13P0DJ93 91 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 COX6A1P12074 109 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 HLA-DRB4P13762 266 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 CD70P32970 193 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 ZNF80P51504 273 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 PRR3P79522 188 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 FUT5Q11128 374 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 CST6Q15828 149 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 RSPO1Q2MKA7 263 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 KTN1-AS1Q86SY8 53 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 SIGLECL1Q8N7X8 197 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 TMEM75Q8N9X5 138 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 OR8B3Q8NGG8 313 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 OR5C1Q8NGR4 320 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 MRPL30Q8TCC3 161 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 TMEM230Q96A57 120 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 ODF3Q96PU9 254 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 METTL26Q96S19 204 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 UPK3BQ9BT76 320 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 EIF5A2Q9GZV4 153 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 GABARAPL1Q9H0R8 117 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 SLC39A9Q9NUM3 307 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 TP73-AS1Q9UF72 201 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 LSM2Q9Y333 95 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 HLA-DRB4X5D2U9 266 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 NCKAP5O14513 1909 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 DSPPQ9NZW4 1301 aa2.1□□□□□ -2.07
SMCHD1-202ENST00000577300 MYH8P13535 1937 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 ADGRL1O94910 1474 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 SPHKAPQ2M3C7 1700 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 SCN10AQ9Y5Y9 1956 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 ATP7AQ04656 1500 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 IGKV1D-43A0A0B4J1Z2 117 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 IGKV1D-13A0A0B4J2D9 117 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 RBMY1BA6NDE4 496 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 RBMY1EA6NEQ0 496 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 A8MUN3 132 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 SYNGR2O43760 224 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 NDUFS5O43920 106 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 IGKCP01834 107 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 RBMY1DP0C7P1 496 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 RBMY1A1P0DJD3 496 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 IGKV1-13P0DP09 117 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 MPV17P39210 176 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 CAV3P56539 151 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms