RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 GRAMD2BQ96HH9 432 aa11.91□□□□□ -0.5
MBD1-203ENST00000339998 C19orf71A6NCJ1 209 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 IZUMO1RA6ND01 250 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 RPL7P18124 248 aaKnown RBP11.9□□□□□ -0.5
MBD1-203ENST00000339998 ERCC8Q13216 396 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 PSG3Q16557 428 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 DEFB113Q30KQ7 82 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 AAMDCQ9H7C9 122 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 PDZD2O15018 2839 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 IGKV3-7A0A075B6H7 116 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 MUC21A0A0G2JKD1 596 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 MUC21A0A140T8X8 626 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 IGHV4-31P0DP07 118 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 MUC21Q5SSG8 566 aa11.9□□□□□ -0.5
MBD1-203ENST00000339998 RPP21Q9H633 154 aaKnown RBP11.9□□□□□ -0.5
MBD1-203ENST00000339998 AKAP9Q99996 3911 aa11.89□□□□□ -0.51
MBD1-203ENST00000339998 TSKUQ8WUA8 353 aa11.89□□□□□ -0.51
MBD1-203ENST00000339998 DAZAP1Q96EP5 407 aaKnown RBP11.89□□□□□ -0.51
MBD1-203ENST00000339998 TCEAL7Q9BRU2 100 aa11.89□□□□□ -0.51
MBD1-203ENST00000339998 CHEK1O14757 476 aa11.89□□□□□ -0.51
MBD1-203ENST00000339998 CRISP2P16562 243 aa11.89□□□□□ -0.51
MBD1-203ENST00000339998 ARL3P36405 182 aa11.89□□□□□ -0.51
MBD1-203ENST00000339998 DEFB1P60022 68 aa11.89□□□□□ -0.51
MBD1-203ENST00000339998 OR2D3Q8NGH3 330 aa11.89□□□□□ -0.51
MBD1-203ENST00000339998 TPPP3Q9BW30 176 aa11.89□□□□□ -0.51
MBD1-203ENST00000339998 PRSS22Q9GZN4 317 aa11.89□□□□□ -0.51
MBD1-203ENST00000339998 UNC79Q9P2D8 2635 aa11.89□□□□□ -0.51
MBD1-203ENST00000339998 BEX4Q9NWD9 120 aaPredicted RBP11.88□□□□□ -0.51
MBD1-203ENST00000339998 SERF1AO75920 110 aa11.88□□□□□ -0.51
MBD1-203ENST00000339998 IGF1P05019 195 aa11.88□□□□□ -0.51
MBD1-203ENST00000339998 IQCJQ1A5X6 159 aa11.88□□□□□ -0.51
MBD1-203ENST00000339998 COA6Q5JTJ3 125 aaKnown RBP11.88□□□□□ -0.51
MBD1-203ENST00000339998 GBGT1Q8N5D6 347 aa11.88□□□□□ -0.51
MBD1-203ENST00000339998 RCHY1Q96PM5 261 aa11.88□□□□□ -0.51
MBD1-203ENST00000339998 GNB1LQ9BYB4 327 aa11.88□□□□□ -0.51
MBD1-203ENST00000339998 ZNF331Q9NQX6 463 aaPredicted RBP11.88□□□□□ -0.51
MBD1-203ENST00000339998 TRBV7-1A0A0A6YYK4 115 aa11.88□□□□□ -0.51
MBD1-203ENST00000339998 SMAD7O15105 426 aaKnown RBP11.88□□□□□ -0.51
MBD1-203ENST00000339998 ZNF705DP0CH99 300 aaPredicted RBP11.88□□□□□ -0.51
MBD1-203ENST00000339998 ZNF705BP0CI00 300 aaPredicted RBP11.88□□□□□ -0.51
MBD1-203ENST00000339998 SRIP30626 198 aa11.88□□□□□ -0.51
MBD1-203ENST00000339998 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.87□□□□□ -0.51
MBD1-203ENST00000339998 TMEM75Q8N9X5 138 aa11.87□□□□□ -0.51
MBD1-203ENST00000339998 WFDC11Q8NEX6 87 aa11.87□□□□□ -0.51
MBD1-203ENST00000339998 GSN-AS1Q9NRJ2 163 aa11.87□□□□□ -0.51
MBD1-203ENST00000339998 TRAV9-1A0A075B6T8 112 aa11.86□□□□□ -0.51
MBD1-203ENST00000339998 SCGB2A1O75556 95 aa11.86□□□□□ -0.51
MBD1-203ENST00000339998 KRTAP1-3Q8IUG1 177 aa11.86□□□□□ -0.51
MBD1-203ENST00000339998 ZNF80P51504 273 aaPredicted RBP11.86□□□□□ -0.51
MBD1-203ENST00000339998 RELQ04864 619 aaPredicted RBP11.86□□□□□ -0.51
MBD1-203ENST00000339998 KLK9Q2XQG4 91 aa11.86□□□□□ -0.51
MBD1-203ENST00000339998 LCN12Q6JVE5 192 aa11.86□□□□□ -0.51
MBD1-203ENST00000339998 BAGE3Q86Y29 109 aa11.86□□□□□ -0.51
MBD1-203ENST00000339998 LYPD1Q8N2G4 141 aa11.86□□□□□ -0.51
MBD1-203ENST00000339998 KLK9Q9UKQ9 250 aa11.86□□□□□ -0.51
MBD1-203ENST00000339998 RNF24Q9Y225 148 aa11.86□□□□□ -0.51
MBD1-203ENST00000339998 PDE6HQ13956 83 aa11.85□□□□□ -0.51
MBD1-203ENST00000339998 OR4X2Q8NGF9 303 aa11.85□□□□□ -0.51
MBD1-203ENST00000339998 METTL26Q96S19 204 aa11.85□□□□□ -0.51
MBD1-203ENST00000339998 SRD5A1P18405 259 aa11.85□□□□□ -0.51
MBD1-203ENST00000339998 CSN1S1P47710 185 aa11.85□□□□□ -0.51
MBD1-203ENST00000339998 Q6ZQT7 251 aa11.85□□□□□ -0.51
MBD1-203ENST00000339998 APCSP02743 223 aa11.85□□□□□ -0.51
MBD1-203ENST00000339998 LOXL1Q08397 574 aaPredicted RBP11.85□□□□□ -0.51
MBD1-203ENST00000339998 WNK1Q9H4A3 2382 aa11.84□□□□□ -0.51
MBD1-203ENST00000339998 K7EQM0 130 aa11.84□□□□□ -0.51
MBD1-203ENST00000339998 GATA3P23771 443 aa11.84□□□□□ -0.51
MBD1-203ENST00000339998 RAB9AP51151 201 aa11.84□□□□□ -0.51
MBD1-203ENST00000339998 FOXA3P55318 350 aaPredicted RBP11.84□□□□□ -0.51
MBD1-203ENST00000339998 FAM223BA6NKX1 122 aa11.84□□□□□ -0.51
MBD1-203ENST00000339998 A8MWL6 223 aa11.84□□□□□ -0.51
MBD1-203ENST00000339998 CRIP2P52943 208 aaPredicted RBP11.84□□□□□ -0.51
MBD1-203ENST00000339998 PSG9Q00887 426 aa11.84□□□□□ -0.51
MBD1-203ENST00000339998 TM4SF20Q53R12 229 aa11.84□□□□□ -0.51
MBD1-203ENST00000339998 FAM223AQ8IWN6 122 aa11.84□□□□□ -0.51
MBD1-203ENST00000339998 TRAV8-2A0A0B4J237 113 aa11.83□□□□□ -0.52
MBD1-203ENST00000339998 M0QZ24 198 aa11.83□□□□□ -0.52
MBD1-203ENST00000339998 HOXA3O43365 443 aaPredicted RBP11.83□□□□□ -0.52
MBD1-203ENST00000339998 S100A7AQ86SG5 101 aa11.83□□□□□ -0.52
MBD1-203ENST00000339998 ZNF492Q9P255 531 aa11.83□□□□□ -0.52
MBD1-203ENST00000339998 RNF114Q9Y508 228 aa11.83□□□□□ -0.52
MBD1-203ENST00000339998 LINC00587B1AMM8 73 aa11.83□□□□□ -0.52
MBD1-203ENST00000339998 ZNF253O75346 499 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 ARMS2P0C7Q2 107 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 WDR73Q6P4I2 378 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 FAM19A2Q8N3H0 131 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 PRR25Q96S07 402 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 NPIPB6E9PJ23 425 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 RPL11P62913 178 aaKnown RBP11.82□□□□□ -0.52
MBD1-203ENST00000339998 C8orf86Q6ZUL3 223 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 SMIM12Q96EX1 92 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 PRO1933Q9H354 126 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 ZFP30Q9Y2G7 519 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 IGLV1-40P01703 118 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 HLA-DQA1P01909 254 aa11.82□□□□□ -0.52
MBD1-203ENST00000339998 NIPBLQ6KC79 2804 aaeCLIP11.81□□□□□ -0.52
MBD1-203ENST00000339998 A0A1B0GXF2 115 aa11.81□□□□□ -0.52
MBD1-203ENST00000339998 J3KRW8 73 aa11.81□□□□□ -0.52
MBD1-203ENST00000339998 SH2D1AO60880 128 aa11.81□□□□□ -0.52
MBD1-203ENST00000339998 TMEM18Q96B42 140 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms