RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GSN-AS1Q9NRJ2 163 aa18.01■□□□□ 0.47
VPS16-201ENST00000380443 M0QZK8 103 aa18■□□□□ 0.47
VPS16-201ENST00000380443 BRI3O95415 125 aa18■□□□□ 0.47
VPS16-201ENST00000380443 CSN1S1P47710 185 aa18■□□□□ 0.47
VPS16-201ENST00000380443 JOSD1Q15040 202 aaPredicted RBP18■□□□□ 0.47
VPS16-201ENST00000380443 NUP35Q8NFH5 326 aa18■□□□□ 0.47
VPS16-201ENST00000380443 OR5R1Q8NH85 324 aa18■□□□□ 0.47
VPS16-201ENST00000380443 FAM223BA6NKX1 122 aa17.99■□□□□ 0.47
VPS16-201ENST00000380443 DIRC3C9JPN6 131 aa17.99■□□□□ 0.47
VPS16-201ENST00000380443 NPIPB6E9PJ23 425 aa17.99■□□□□ 0.47
VPS16-201ENST00000380443 IGHV3-23P01764 117 aa17.99■□□□□ 0.47
VPS16-201ENST00000380443 PAFAH1B2P68402 229 aa17.99■□□□□ 0.47
VPS16-201ENST00000380443 PSG3Q16557 428 aa17.99■□□□□ 0.47
VPS16-201ENST00000380443 C19orf54Q5BKX5 351 aa17.99■□□□□ 0.47
VPS16-201ENST00000380443 FAM223AQ8IWN6 122 aa17.99■□□□□ 0.47
VPS16-201ENST00000380443 TRAV41A0A0B4J266 112 aa17.98■□□□□ 0.47
VPS16-201ENST00000380443 OR10J3Q5JRS4 329 aa17.98■□□□□ 0.47
VPS16-201ENST00000380443 SGK494Q96LW2 274 aa17.98■□□□□ 0.47
VPS16-201ENST00000380443 C17orf77Q96MU5 243 aa17.98■□□□□ 0.47
VPS16-201ENST00000380443 CA1P00915 261 aaPredicted RBP17.98■□□□□ 0.47
VPS16-201ENST00000380443 CLEC3BP05452 202 aa17.98■□□□□ 0.47
VPS16-201ENST00000380443 GPR183P32249 361 aa17.98■□□□□ 0.47
VPS16-201ENST00000380443 MRPL54Q6P161 138 aaKnown RBP17.98■□□□□ 0.47
VPS16-201ENST00000380443 PRNTQ86SH4 94 aa17.98■□□□□ 0.47
VPS16-201ENST00000380443 NEU1Q99519 415 aa17.98■□□□□ 0.47
VPS16-201ENST00000380443 MED13LQ71F56 2210 aa17.97■□□□□ 0.47
VPS16-201ENST00000380443 RELQ04864 619 aaPredicted RBP17.97■□□□□ 0.47
VPS16-201ENST00000380443 ATP5G2Q06055 141 aa17.97■□□□□ 0.47
VPS16-201ENST00000380443 TOMM20LQ6UXN7 152 aa17.97■□□□□ 0.47
VPS16-201ENST00000380443 PSG8Q9UQ74 426 aa17.97■□□□□ 0.47
VPS16-201ENST00000380443 FBN2P35556 2912 aa17.96■□□□□ 0.47
VPS16-201ENST00000380443 HIGD1CA8MV81 97 aa17.96■□□□□ 0.47
VPS16-201ENST00000380443 G3V318 75 aa17.96■□□□□ 0.47
VPS16-201ENST00000380443 H3BUA1 57 aa17.96■□□□□ 0.47
VPS16-201ENST00000380443 SPINK4O60575 86 aa17.96■□□□□ 0.47
VPS16-201ENST00000380443 APCSP02743 223 aa17.96■□□□□ 0.47
VPS16-201ENST00000380443 IGF1P05019 195 aa17.96■□□□□ 0.47
VPS16-201ENST00000380443 RAB4BP61018 213 aa17.96■□□□□ 0.47
VPS16-201ENST00000380443 C16orf54Q6UWD8 224 aa17.96■□□□□ 0.47
VPS16-201ENST00000380443 BRD3OSQ6XYD6 125 aa17.96■□□□□ 0.47
VPS16-201ENST00000380443 IGHV3OR16-10A0A075B7F0 116 aa17.95■□□□□ 0.46
VPS16-201ENST00000380443 A6NDX4 124 aa17.95■□□□□ 0.46
VPS16-201ENST00000380443 IGHV4-38-2P0DP08 117 aa17.95■□□□□ 0.46
VPS16-201ENST00000380443 C1orf194Q5T5A4 169 aa17.95■□□□□ 0.46
VPS16-201ENST00000380443 ZFAND3Q9H8U3 227 aa17.95■□□□□ 0.46
VPS16-201ENST00000380443 TACC2O95359 2948 aa17.95■□□□□ 0.46
VPS16-201ENST00000380443 LINC01548A6NM66 108 aa17.95■□□□□ 0.46
VPS16-201ENST00000380443 FRMD6-AS1P0C7T7 363 aa17.95■□□□□ 0.46
VPS16-201ENST00000380443 KRTAP10-9P60411 292 aa17.95■□□□□ 0.46
VPS16-201ENST00000380443 SLC35B1P78383 322 aa17.95■□□□□ 0.46
VPS16-201ENST00000380443 TMEM219Q86XT9 240 aa17.95■□□□□ 0.46
VPS16-201ENST00000380443 BCL6BQ8N143 479 aaPredicted RBP17.95■□□□□ 0.46
VPS16-201ENST00000380443 A0A087X0K7 114 aa17.94■□□□□ 0.46
VPS16-201ENST00000380443 LINC00322Q6ZN03 302 aaPredicted RBP17.94■□□□□ 0.46
VPS16-201ENST00000380443 BAGE3Q86Y29 109 aa17.94■□□□□ 0.46
VPS16-201ENST00000380443 TMEM256Q8N2U0 113 aa17.94■□□□□ 0.46
VPS16-201ENST00000380443 CCDC140Q96MF4 163 aa17.94■□□□□ 0.46
VPS16-201ENST00000380443 HIF1ANQ9NWT6 349 aa17.94■□□□□ 0.46
VPS16-201ENST00000380443 APCP25054 2843 aa17.94■□□□□ 0.46
VPS16-201ENST00000380443 TRAV8-1A0A0A6YYK1 113 aa17.93■□□□□ 0.46
VPS16-201ENST00000380443 TPPP2P59282 170 aa17.93■□□□□ 0.46
VPS16-201ENST00000380443 AKAP6Q13023 2319 aa17.93■□□□□ 0.46
VPS16-201ENST00000380443 RBPMS2Q6ZRY4 209 aaKnown RBP17.93■□□□□ 0.46
VPS16-201ENST00000380443 A0A1B0GXF2 115 aa17.93■□□□□ 0.46
VPS16-201ENST00000380443 GRIFINA4D1Z8 144 aa17.93■□□□□ 0.46
VPS16-201ENST00000380443 IGHG2P01859 326 aa17.93■□□□□ 0.46
VPS16-201ENST00000380443 FOXA3P55318 350 aaPredicted RBP17.93■□□□□ 0.46
VPS16-201ENST00000380443 COX8CQ7Z4L0 72 aa17.93■□□□□ 0.46
VPS16-201ENST00000380443 LINC01356Q8N9X3 169 aa17.93■□□□□ 0.46
VPS16-201ENST00000380443 J3QLI3 93 aa17.92■□□□□ 0.46
VPS16-201ENST00000380443 CLEC19AQ6UXS0 136 aa17.92■□□□□ 0.46
VPS16-201ENST00000380443 CIARTQ8N365 385 aaPredicted RBP17.92■□□□□ 0.46
VPS16-201ENST00000380443 ABCA2Q9BZC7 2435 aa17.91■□□□□ 0.46
VPS16-201ENST00000380443 ITPR2Q14571 2701 aa17.91■□□□□ 0.46
VPS16-201ENST00000380443 BUB3O43684 328 aa17.91■□□□□ 0.46
VPS16-201ENST00000380443 SAPCD1Q5SSQ6 148 aa17.91■□□□□ 0.46
VPS16-201ENST00000380443 TP53TG3Q9ULZ0 132 aa17.91■□□□□ 0.46
VPS16-201ENST00000380443 SH2D7A6NKC9 451 aaPredicted RBP17.91■□□□□ 0.46
VPS16-201ENST00000380443 GZMBP10144 247 aa17.91■□□□□ 0.46
VPS16-201ENST00000380443 HBBP68871 147 aa17.91■□□□□ 0.46
VPS16-201ENST00000380443 USMG5Q96IX5 58 aa17.91■□□□□ 0.46
VPS16-201ENST00000380443 GNB4Q9HAV0 340 aa17.91■□□□□ 0.46
VPS16-201ENST00000380443 SMAD5-AS1Q9Y6J3 95 aa17.91■□□□□ 0.46
VPS16-201ENST00000380443 METTL26Q96S19 204 aa17.9■□□□□ 0.46
VPS16-201ENST00000380443 ZNF580Q9UK33 172 aa17.9■□□□□ 0.46
VPS16-201ENST00000380443 ABCA12Q86UK0 2595 aa17.89■□□□□ 0.46
VPS16-201ENST00000380443 H3BUX3 64 aa17.89■□□□□ 0.45
VPS16-201ENST00000380443 CT45A10P0DMU9 189 aa17.89■□□□□ 0.45
VPS16-201ENST00000380443 MS4A10Q96PG2 267 aa17.89■□□□□ 0.45
VPS16-201ENST00000380443 SLC50A1Q9BRV3 221 aa17.89■□□□□ 0.45
VPS16-201ENST00000380443 M0R3E3 92 aa17.88■□□□□ 0.45
VPS16-201ENST00000380443 SERF1AO75920 110 aa17.88■□□□□ 0.45
VPS16-201ENST00000380443 IQCJQ1A5X6 159 aa17.88■□□□□ 0.45
VPS16-201ENST00000380443 OR2D3Q8NGH3 330 aa17.88■□□□□ 0.45
VPS16-201ENST00000380443 ZC2HC1AQ96GY0 325 aa17.88■□□□□ 0.45
VPS16-201ENST00000380443 NUPR1O60356 82 aa17.88■□□□□ 0.45
VPS16-201ENST00000380443 TRGV3P03979 118 aa17.88■□□□□ 0.45
VPS16-201ENST00000380443 Q6AWC8 147 aa17.88■□□□□ 0.45
VPS16-201ENST00000380443 TCF24Q7RTU0 167 aa17.88■□□□□ 0.45
VPS16-201ENST00000380443 GTSF1Q8WW33 167 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms