RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 RBPMSQ93062 196 aaKnown RBP2.05□□□□□ -2.08
KPNB1-208ENST00000580019 HIST1H2BHQ93079 126 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 HIST1H2BAQ96A08 127 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 ADAT3Q96EY9 351 aaPredicted RBP2.05□□□□□ -2.08
KPNB1-208ENST00000580019 FOPNLQ96NB1 174 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 HIST1H2BNQ99877 126 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 HIST1H2BMQ99879 126 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 RTL8AQ9BWD3 113 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 MND1Q9BWT6 205 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 OR2J1Q9GZK6 312 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 RNF122Q9H9V4 155 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 ZNF586Q9NXT0 402 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 PTPRJQ12913 1337 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 FBN1P35555 2871 aaKnown RBP2.05□□□□□ -2.08
KPNB1-208ENST00000580019 CRYBG3Q68DQ2 2970 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 MYH1P12882 1939 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 NUP205Q92621 2012 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 ABCA7Q8IZY2 2146 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 RTTNQ86VV8 2226 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 RP1L1Q8IWN7 2480 aaPredicted RBP2.05□□□□□ -2.08
KPNB1-208ENST00000580019 CCDC168Q8NDH2 2452 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 JMJD1CQ15652 2540 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 TRBV24-1A0A075B6N3 115 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 TMEM189A5PLL7 270 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 A8MWP4 228 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 NDUFB2O95178 105 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 CGB3P0DN86 165 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 CGB7P0DN87 165 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 IGHV3-30-3P0DP02 117 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 NPY1RP25929 384 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 CASP1P29466 404 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 S100A7P31151 101 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 CD52P31358 61 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 TGFBR1P36897 503 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 LPAR6P43657 344 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 RPL27AP46776 148 aaKnown RBP2.04□□□□□ -2.08
KPNB1-208ENST00000580019 CSN1S1P47710 185 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 GABRA2P47869 451 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 POLR2HP52434 150 aaKnown RBP2.04□□□□□ -2.08
KPNB1-208ENST00000580019 DSCR10P59022 87 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 TAS2R20P59543 309 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 CCL20P78556 96 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 ZNF616Q08AN1 781 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 IGFBP7Q16270 282 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 LAMA4Q16363 1823 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 ARHGAP21Q5T5U3 1957 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 NIPBLQ6KC79 2804 aaeCLIP2.04□□□□□ -2.08
KPNB1-208ENST00000580019 ANKRD12Q6UB98 2062 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 Q6ZR03 302 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 KTN1-AS1Q86SY8 53 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 TMEM86AQ8N2M4 240 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 EXOC3-AS1Q8N2X6 119 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 C10orf126Q8N4M7 172 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 C3orf22Q8N5N4 141 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 ZFAND2AQ8N6M9 145 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 DAND5Q8N907 189 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 SPANXA2-OT1Q8N9U9 137 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 ZFP62Q8NB50 900 aaPredicted RBP2.04□□□□□ -2.08
KPNB1-208ENST00000580019 OR10D4PQ8NGN7 298 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 FNDC9Q8TBE3 224 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 C1orf54Q8WWF1 131 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 ISOC1Q96CN7 298 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 IP6K3Q96PC2 410 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 XAGE1AQ9HD64 81 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 STAB1Q9NY15 2570 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 CELA1Q9UNI1 258 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 FUT9Q9Y231 359 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 PLXND1Q9Y4D7 1925 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 LINC00588Q9Y4M8 146 aa2.04□□□□□ -2.08
KPNB1-208ENST00000580019 AMMECR1Q9Y4X0 333 aaPredicted RBP2.04□□□□□ -2.08
KPNB1-208ENST00000580019 PI4KAP42356 2102 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 NUP214P35658 2090 aaPredicted RBP2.03□□□□□ -2.08
KPNB1-208ENST00000580019 ADAMTS9Q9P2N4 1935 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 NUP210LQ5VU65 1888 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 COL27A1Q8IZC6 1860 aaPredicted RBP2.03□□□□□ -2.08
KPNB1-208ENST00000580019 MYO5AQ9Y4I1 1855 aaKnown RBP2.03□□□□□ -2.08
KPNB1-208ENST00000580019 A0A087WUU8 490 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 GRIFINA4D1Z8 144 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 A6NED7 52 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 A8MWP6 167 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 MIF4GDA9UHW6 222 aaKnown RBP2.03□□□□□ -2.08
KPNB1-208ENST00000580019 C5orf58C9J3I9 102 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 TRAPPC2LH3BP13 241 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 I3L521 148 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 TPST1O60507 370 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 SH2D1AO60880 128 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 SMIM24O75264 130 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 CCNKO75909 580 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 LHBP01229 141 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 IGKV1D-33P01593 117 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 IGKV1-33P01594 117 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 APOC1P02654 83 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 TRGV3P03979 118 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 PRM2P04554 102 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 LINC00869P0C866 280 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 INAFM2P0DMQ5 153 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 BCL2P10415 239 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 S100A4P26447 101 aaKnown RBP2.03□□□□□ -2.08
KPNB1-208ENST00000580019 CD200P41217 278 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 RPS11P62280 158 aaKnown RBP eCLIP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms