RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Taar4Q5QD15 347 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Dlx1Q64317 255 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Olfr1242Q8VGM6 306 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Sh2d6Q9D413 297 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Mbnl1Q9JKP5 341 aaKnown RBP11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Igkv6-15A0A140T8M5 115 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Cox7a2P48771 83 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Timm8bP62077 83 aaKnown RBP11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Hapln4Q80WM4 400 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Pomt1Q8R2R1 746 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Ppp1r14aQ91VC7 147 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Pmaip1Q9JM54 103 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 3110021N24RikJ3QMN2 152 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Tcrg-V1P06325 135 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Zfp11P10751 647 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 PjvkQ0ZLH2 352 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Ctf1Q60753 203 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Olfr25Q7TRD6 313 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Pxmp4Q9JJW0 212 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Igkv1-132A0A0B4J1H9 120 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm20767O70517 169 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Olfr1211Q7TR09 311 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm10309Q8C648 119 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Xrcc3Q9CXE6 349 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Slc25a10Q9QZD8 287 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm37797A0A1D5RLC8 261 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Mmp27D3YV89 551 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm10036E9PYL9 178 aaKnown RBP11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Zfp160E9Q459 650 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Vmn1r128L7N2B4 307 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Bet1lO35153 111 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Nkx3-1P97436 237 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm9733Q1AN91 178 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Wdyhv1Q80WB5 209 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Zim1Q8C393 579 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Dnttip1Q99LB0 328 aa11.25□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm10778A0A087WNP5 499 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gosr1O88630 250 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Znf691Q3TDE8 283 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Rnf182Q8C432 247 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Nup35Q8R4R6 325 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Alkbh7Q9D6Z0 221 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Q9D9C7 252 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 P01803 113 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gnb4P29387 340 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Id4P41139 161 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Jsrp1Q3MI48 332 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Dhrs9Q58NB6 319 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Olfr786Q8VFH8 312 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Olfr1298Q8VGE6 312 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Sval2Q99N75 144 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Tceal8Q9CZY2 117 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Kcnip2Q9JJ69 270 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Aifm1Q9Z0X1 612 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 OdamA1E960 273 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Zfp972A2AW65 139 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 MyadmO35682 320 aaKnown RBP11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Rab19P35294 217 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Chrna7P49582 502 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Pate4Q09098 99 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Cd96Q3U0X8 602 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 C330021F23RikQ8C7T0 141 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Znhit3Q9CQK1 151 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Ap5s1Q9D742 170 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Bcl2l10Q9Z0F3 191 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Zfp53Q9Z117 652 aa11.24□□□□□ -0.61
Clcn3-204ENSMUST00000110301 A0A1Y7VLU2 103 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Pwwp2bE9Q9M8 600 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Cxcl13O55038 109 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm10384Q3UQ87 92 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Vmn1r222Q8R269 308 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Cds2Q99L43 444 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Rer1Q9CQU3 196 aaKnown RBP11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Ccl28Q9JIL2 130 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Mettl4Q3U034 471 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Smug1Q6P5C5 279 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Klf11Q8K1S5 502 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Hoxc12Q8K5B8 280 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Q8VE95 218 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Map1lc3bQ9CQV6 125 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Ighv9-2A0A0B4J1J4 117 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 1700031F05RikB1AX30 191 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Ankrd66J3QNN4 192 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Foxf2O54743 446 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gls2Q571F8 602 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Vmn1r230Q8R2A2 316 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Olfr1411Q8VFC4 323 aa11.23□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Pkd1l2Q7TN88 2461 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Igkv14-100A0A0G2JG36 117 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Slc35d1A2AKQ0 355 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Efna4O08542 206 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Sssca1P56873 199 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Supt4h1aP63271 117 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Cbln2Q8BGU2 224 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Olfr1183Q8VFF8 303 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Tmem107Q9CPV0 140 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 SelenofQ9ERR7 162 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Usf3B2RUQ2 2221 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Olfr175-ps1A0A140T8K4 308 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Zfp456B2RUK9 458 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms