RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Aadacl4B1AVU5 407 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Hbb-bh2B2RVB7 147 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr920E9Q413 310 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Tnfsf12O54907 249 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Hbb-yP02104 147 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 LoxP28301 411 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Vdac2Q60930 295 aaKnown RBP12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Phox2aQ62066 280 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr1341Q7TQV4 312 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Atpaf1Q811I0 324 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Q8VC23 124 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr76Q8VFV2 317 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr1462Q8VFW3 307 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ssna1Q9JJ94 119 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ankrd11E9Q4F7 2643 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm16368A0A1Y7VNG9 144 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr1329L7MTV4 313 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rps16P14131 146 aaKnown RBP12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr1299Q7TQX5 312 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rnf170Q8CBG9 286 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr641Q8VGX6 312 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Tmem50aQ9CXL1 157 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Cysrt1Q9D1E4 142 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Sdf2l1Q9ESP1 221 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Wisp2Q9Z0G4 251 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ccl8Q9Z121 97 aa12.18□□□□□ -0.46
Nup88-202ENSMUST00000108530 Hectd1Q69ZR2 2618 aaKnown RBP12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Itpr3P70227 2670 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm15128A2ADW8 449 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm15080A2BI02 449 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm15093A2BI72 449 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Luzp4B1AV09 449 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm15107B1B0X0 449 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Vmn1r224E9PWK2 298 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm15097E9QA14 449 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 P06335 190 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 P18529 117 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Prrc1Q3UPH1 443 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Prss44Q402U7 372 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Trdv4Q5R1A3 115 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm15085Q62012 449 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Med6Q921D4 246 aaKnown RBP12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr661Q99NH4 319 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Cldn23Q9D7D7 296 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 CnmdQ9Z1F6 334 aa12.17□□□□□ -0.46
Nup88-202ENSMUST00000108530 Zfp160E9Q459 650 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm10666K7N6B8 321 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Vmn1r114L7N226 321 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Vmn1r126L7N2C8 321 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ifna2P01573 190 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 P01723 117 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 CortP56469 109 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Pip4p1Q3TWL2 284 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ldlrad2Q3V0V0 142 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr907Q7TRC7 310 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Dirc2Q8BFQ6 478 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Pla2g16Q8R3U1 162 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr916Q8VG53 310 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Zfp958Q99LG7 467 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 H2afb1Q9CQ70 111 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Tceal8Q9CZY2 117 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 9130008F23RikQ9D2Z6 181 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 TslpQ9JIE6 140 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 RprmQ9JJ72 109 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ube2j1Q9JJZ4 318 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Psmb3Q9R1P1 205 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Angptl4Q9Z1P8 410 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Trav6d-5A0A075B6B9 112 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Nxph4G3X9N5 304 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 P04940 107 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 P04941 107 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 P18528 98 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Fgf8P37237 268 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Lhx4P53776 390 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr859Q7TRF5 309 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr492Q8VFD1 314 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rnf151Q9CQ29 239 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Cbln3Q9JHG0 197 aa12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Chd8Q09XV5 2582 aaKnown RBP12.16□□□□□ -0.46
Nup88-202ENSMUST00000108530 Cst7O89098 144 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 P01882 290 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ssbp4Q3U4B1 363 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Lclat1Q3UN02 376 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ube2d2bQ6ZWY6 147 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr1356Q7TQU8 320 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Harbi1Q8BR93 349 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Prss45Q8K4I7 317 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Lyrm2Q8R033 88 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 HaghQ99KB8 309 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Q9CQ90 155 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 1700015F17RikD3YUK8 150 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr432E9Q8M2 312 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm20830J3KML6 227 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Icam2P35330 277 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Cpne2P59108 548 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 NotoQ5TIS6 240 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Pomt1Q8R2R1 746 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr1086Q8VFL9 310 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Mrpl3Q99N95 348 aa12.15□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rab27bQ99P58 218 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms