Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Gm25239-201ENSMUST00000174915 86 ntBASIC29.96■■■□□ 2.39
Rnf170Q8CBG9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rnf170Q8CBG9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Rnf170Q8CBG9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Rnf170Q8CBG9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rnf170Q8CBG9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rnf170Q8CBG9 Psd-208ENSMUST00000224556 2034 ntBASIC26.62■■□□□ 1.85
Rnf170Q8CBG9 Gm15042-201ENSMUST00000120212 883 ntBASIC26.61■■□□□ 1.85
Rnf170Q8CBG9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf170Q8CBG9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Rnf170Q8CBG9 Gm15045-201ENSMUST00000117359 883 ntBASIC26.05■■□□□ 1.76
Rnf170Q8CBG9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rnf170Q8CBG9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rnf170Q8CBG9 Gm24109-201ENSMUST00000175489 103 ntBASIC25.72■■□□□ 1.71
Rnf170Q8CBG9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf170Q8CBG9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.56■■□□□ 1.68
Rnf170Q8CBG9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf170Q8CBG9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rnf170Q8CBG9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf170Q8CBG9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf170Q8CBG9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf170Q8CBG9 Gm23366-201ENSMUST00000175022 89 ntBASIC25.11■■□□□ 1.61
Rnf170Q8CBG9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf170Q8CBG9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf170Q8CBG9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rnf170Q8CBG9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf170Q8CBG9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rnf170Q8CBG9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf170Q8CBG9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rnf170Q8CBG9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rnf170Q8CBG9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rnf170Q8CBG9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rnf170Q8CBG9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.86■■□□□ 1.57
Rnf170Q8CBG9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rnf170Q8CBG9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rnf170Q8CBG9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf170Q8CBG9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rnf170Q8CBG9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.63■■□□□ 1.53
Rnf170Q8CBG9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Rnf170Q8CBG9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Rnf170Q8CBG9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnf170Q8CBG9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.47■■□□□ 1.51
Rnf170Q8CBG9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rnf170Q8CBG9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.28■■□□□ 1.48
Rnf170Q8CBG9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf170Q8CBG9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.2■■□□□ 1.47
Rnf170Q8CBG9 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.09■■□□□ 1.45
Rnf170Q8CBG9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Rnf170Q8CBG9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf170Q8CBG9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf170Q8CBG9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf170Q8CBG9 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.9■■□□□ 1.42
Rnf170Q8CBG9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Rnf170Q8CBG9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.89■■□□□ 1.41
Rnf170Q8CBG9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rnf170Q8CBG9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
Rnf170Q8CBG9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rnf170Q8CBG9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.8■■□□□ 1.4
Rnf170Q8CBG9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf170Q8CBG9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rnf170Q8CBG9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf170Q8CBG9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf170Q8CBG9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Rnf170Q8CBG9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rnf170Q8CBG9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf170Q8CBG9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rnf170Q8CBG9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf170Q8CBG9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Rnf170Q8CBG9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
Rnf170Q8CBG9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rnf170Q8CBG9 Gm25238-201ENSMUST00000174914 89 ntBASIC23.5■■□□□ 1.35
Rnf170Q8CBG9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf170Q8CBG9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.48■■□□□ 1.35
Rnf170Q8CBG9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.47■■□□□ 1.35
Rnf170Q8CBG9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rnf170Q8CBG9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Rnf170Q8CBG9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
Rnf170Q8CBG9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf170Q8CBG9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rnf170Q8CBG9 Gm27325-201ENSMUST00000175467 74 ntBASIC23.39■■□□□ 1.33
Rnf170Q8CBG9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rnf170Q8CBG9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.39■■□□□ 1.33
Rnf170Q8CBG9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf170Q8CBG9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf170Q8CBG9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.24■■□□□ 1.31
Rnf170Q8CBG9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf170Q8CBG9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf170Q8CBG9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf170Q8CBG9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Rnf170Q8CBG9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf170Q8CBG9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf170Q8CBG9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf170Q8CBG9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf170Q8CBG9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Rnf170Q8CBG9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
Rnf170Q8CBG9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf170Q8CBG9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf170Q8CBG9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf170Q8CBG9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf170Q8CBG9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms