RNA–Protein interactions for RNA: snR46

snR46, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR46, Length 197 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR46	snR46	YJL049W	P47048	450 aa		1.74	□□□□□ -2.13
snR46	snR46	AIM14	P53109	570 aa		1.74	□□□□□ -2.13
snR46	snR46	FMP46	P36141	133 aa	Known RBP	1.73	□□□□□ -2.13
snR46	snR46	MAL31	P38156	614 aa		1.73	□□□□□ -2.13
snR46	snR46	GND1	P38720	489 aa	Known RBP	1.73	□□□□□ -2.13
snR46	snR46	MNN1	P39106	762 aa		1.73	□□□□□ -2.13
snR46	snR46	YEL025C	P39991	1188 aa		1.73	□□□□□ -2.13
snR46	snR46	VRG4	P40107	337 aa		1.73	□□□□□ -2.13
snR46	snR46	TES1	P41903	349 aa	Known RBP	1.73	□□□□□ -2.13
snR46	snR46	SKP2	P42843	763 aa		1.73	□□□□□ -2.13
snR46	snR46	TDA10	P42938	290 aa		1.73	□□□□□ -2.13
snR46	snR46	TIM50	Q02776	476 aa		1.73	□□□□□ -2.13
snR46	snR46	FDC1	Q03034	503 aa		1.73	□□□□□ -2.13
snR46	snR46	PPN1	Q04119	674 aa		1.73	□□□□□ -2.13
snR46	snR46	DSE3	Q08729	430 aa		1.73	□□□□□ -2.13
snR46	snR46	ATX2	Q12067	313 aa		1.73	□□□□□ -2.13
snR46	snR46	AHA1	Q12449	350 aa	Known RBP	1.73	□□□□□ -2.13
snR46	snR46	SRD1	P09007	221 aa		1.72	□□□□□ -2.13
snR46	snR46	SAP4	P53036	818 aa		1.72	□□□□□ -2.13
snR46	snR46	SPO1	P53541	631 aa		1.72	□□□□□ -2.13
snR46	snR46	RCR2	Q03446	210 aa	Known RBP	1.72	□□□□□ -2.13
snR46	snR46	GIN4	Q12263	1142 aa		1.72	□□□□□ -2.13
snR46	snR46	MDM12	Q92328	271 aa		1.72	□□□□□ -2.13
snR46	snR46	CAP1	P28495	268 aa	Known RBP	1.71	□□□□□ -2.14
snR46	snR46	YKU70	P32807	602 aa		1.71	□□□□□ -2.14
snR46	snR46	CCL1	P37366	393 aa		1.71	□□□□□ -2.14
snR46	snR46	SLX1	P38324	304 aa		1.71	□□□□□ -2.14
snR46	snR46	YIL169C	P40442	995 aa		1.71	□□□□□ -2.14
snR46	snR46	BUD8	P41698	603 aa		1.71	□□□□□ -2.14
snR46	snR46	YNL058C	P53947	316 aa		1.71	□□□□□ -2.14
snR46	snR46	SNU56	Q03782	492 aa	Known RBP	1.71	□□□□□ -2.14
snR46	snR46	YMR317W	Q04893	1140 aa		1.71	□□□□□ -2.14
snR46	snR46	YMR034C	Q05131	434 aa	Predicted RBP	1.71	□□□□□ -2.14
snR46	snR46	RTT103	Q05543	409 aa		1.71	□□□□□ -2.14
snR46	snR46	HRD3	Q05787	833 aa		1.71	□□□□□ -2.14
snR46	snR46	YLR407W	Q06070	228 aa		1.71	□□□□□ -2.14
snR46	snR46	ATG33	Q06485	197 aa		1.71	□□□□□ -2.14
snR46	snR46	DCS2	Q12123	353 aa		1.71	□□□□□ -2.14
snR46	snR46	CRG1	P38892	291 aa	RIP-Chip data	1.7	□□□□□ -2.14	not detected
snR46	snR46	BEM4	P39011	633 aa		1.7	□□□□□ -2.14
snR46	snR46	CHZ1	P40019	153 aa	Predicted RBP	1.7	□□□□□ -2.14
snR46	snR46	YIL152W	P40455	235 aa		1.7	□□□□□ -2.14
snR46	snR46	MAL11	P53048	616 aa		1.7	□□□□□ -2.14
snR46	snR46	CDC53	Q12018	815 aa	Known RBP	1.7	□□□□□ -2.14
snR46	snR46	ILS1	P09436	1072 aa	Known RBP	1.69	□□□□□ -2.14
snR46	snR46	ERR1	P0CX10	437 aa		1.69	□□□□□ -2.14
snR46	snR46	ERR2	P0CX11	437 aa		1.69	□□□□□ -2.14
snR46	snR46	HMG1	P12683	1054 aa		1.69	□□□□□ -2.14
snR46	snR46	YPT10	P38146	199 aa		1.69	□□□□□ -2.14
snR46	snR46	DHH1	P39517	506 aa	Known RBP	1.69	□□□□□ -2.14
snR46	snR46	FTR1	P40088	404 aa		1.69	□□□□□ -2.14
snR46	snR46	RPS15	Q01855	142 aa	Known RBP	1.69	□□□□□ -2.14
snR46	snR46	COG8	Q04632	607 aa		1.69	□□□□□ -2.14
snR46	snR46	YOR389W	Q08912	624 aa		1.69	□□□□□ -2.14
snR46	snR46	PCL8	Q08966	492 aa		1.69	□□□□□ -2.14
snR46	snR46	TIP41	Q12199	356 aa		1.69	□□□□□ -2.14
snR46	snR46	PNO1	Q99216	274 aa	Known RBP	1.69	□□□□□ -2.14
snR46	snR46	YPT1	P01123	206 aa	Known RBP	1.68	□□□□□ -2.14
snR46	snR46	YPK1	P12688	680 aa	Known RBP	1.68	□□□□□ -2.14
snR46	snR46	ACO1	P19414	778 aa	Known RBP RIP-Chip data	1.68	□□□□□ -2.14	not detected
snR46	snR46	HOP1	P20050	605 aa		1.68	□□□□□ -2.14
snR46	snR46	IME1	P21190	360 aa		1.68	□□□□□ -2.14
snR46	snR46	PPZ1	P26570	692 aa		1.68	□□□□□ -2.14
snR46	snR46	PRE4	P30657	266 aa		1.68	□□□□□ -2.14
snR46	snR46	SMA2	Q04658	369 aa		1.68	□□□□□ -2.14
snR46	snR46	YPS7	Q06325	596 aa		1.68	□□□□□ -2.14
snR46	snR46	AIM41	Q12032	185 aa		1.68	□□□□□ -2.14
snR46	snR46	YOR131C	Q12486	218 aa		1.68	□□□□□ -2.14
snR46	snR46	YMR230W-A	Q3E7B5	62 aa		1.68	□□□□□ -2.14
snR46	snR46	AAC1	P04710	309 aa		1.67	□□□□□ -2.14
snR46	snR46	MEF1	P25039	761 aa		1.67	□□□□□ -2.14
snR46	snR46	YJU2	P28320	278 aa	Predicted RBP	1.67	□□□□□ -2.14
snR46	snR46	FCP1	Q03254	732 aa		1.67	□□□□□ -2.14
snR46	snR46	ECM22	Q05958	814 aa	Predicted RBP	1.67	□□□□□ -2.14
snR46	snR46	CYK3	Q07533	885 aa		1.67	□□□□□ -2.14
snR46	snR46	CET1	O13297	549 aa	Predicted RBP	1.66	□□□□□ -2.14
snR46	snR46	PRP16	P15938	1071 aa	Predicted RBP	1.66	□□□□□ -2.14
snR46	snR46	SFL1	P20134	766 aa		1.66	□□□□□ -2.14
snR46	snR46	PCM1	P38628	557 aa	Known RBP	1.66	□□□□□ -2.14
snR46	snR46	IMD2	P38697	523 aa	Known RBP	1.66	□□□□□ -2.14
snR46	snR46	IMD3	P50095	523 aa	Known RBP	1.66	□□□□□ -2.14
snR46	snR46	TAF4	P50105	388 aa		1.66	□□□□□ -2.14
snR46	snR46	HOS2	P53096	452 aa	Predicted RBP	1.66	□□□□□ -2.14
snR46	snR46	HLR1	Q04429	423 aa		1.66	□□□□□ -2.14
snR46	snR46	MLH2	Q07980	695 aa		1.66	□□□□□ -2.14
snR46	snR46	GAL4	P04386	881 aa		1.65	□□□□□ -2.15
snR46	snR46	STI1	P15705	589 aa	Known RBP RIP-Chip data	1.65	□□□□□ -2.15	not detected
snR46	snR46	BET2	P20133	325 aa		1.65	□□□□□ -2.15
snR46	snR46	PCL2	P25693	308 aa		1.65	□□□□□ -2.15
snR46	snR46	CDS1	P38221	457 aa		1.65	□□□□□ -2.15
snR46	snR46	EXO84	P38261	753 aa		1.65	□□□□□ -2.15
snR46	snR46	EHT1	P38295	451 aa		1.65	□□□□□ -2.15
snR46	snR46	FTH1	P38310	465 aa		1.65	□□□□□ -2.15
snR46	snR46	TOM71	P38825	639 aa	Known RBP	1.65	□□□□□ -2.15
snR46	snR46	RAD26	P40352	1085 aa		1.65	□□□□□ -2.15
snR46	snR46	DIG1	Q03063	452 aa	Known RBP	1.65	□□□□□ -2.15
snR46	snR46	USA1	Q03714	838 aa		1.65	□□□□□ -2.15
snR46	snR46	STP4	Q07351	490 aa		1.65	□□□□□ -2.15
snR46	snR46	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	1.65	□□□□□ -2.15	not detected
snR46	snR46	RPS17A	P02407	136 aa	Known RBP	1.64	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 231.2 ms