RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17b	snR17b	YTP1	P53584	459 aa		4.97	□□□□□ -1.61
snR17b	snR17b	PRO2	P54885	456 aa	Known RBP	4.97	□□□□□ -1.61
snR17b	snR17b	MMT1	Q03218	510 aa		4.97	□□□□□ -1.61
snR17b	snR17b	TFB3	Q03290	321 aa		4.97	□□□□□ -1.61
snR17b	snR17b	TVP15	Q03860	143 aa		4.97	□□□□□ -1.61
snR17b	snR17b	SPC2	Q04969	178 aa		4.97	□□□□□ -1.61
snR17b	snR17b	COQ9	Q05779	260 aa		4.97	□□□□□ -1.61
snR17b	snR17b	UTP4	Q06679	776 aa	Known RBP	4.97	□□□□□ -1.61
snR17b	snR17b	VAM6	Q07468	1049 aa		4.97	□□□□□ -1.61
snR17b	snR17b	YDL114W	Q07530	308 aa		4.97	□□□□□ -1.61
snR17b	snR17b	RRP36	Q12481	300 aa	Predicted RBP	4.97	□□□□□ -1.61
snR17b	snR17b	ARP6	Q12509	438 aa		4.97	□□□□□ -1.61
snR17b	snR17b	BI3	Q9ZZW7	517 aa		4.97	□□□□□ -1.61
snR17b	snR17b	FIG2	P25653	1609 aa		4.97	□□□□□ -1.61
snR17b	snR17b	COR1	P07256	457 aa		4.96	□□□□□ -1.62
snR17b	snR17b	UBA1	P22515	1024 aa	Known RBP	4.96	□□□□□ -1.62
snR17b	snR17b	ESS1	P22696	170 aa		4.96	□□□□□ -1.62
snR17b	snR17b	SIS1	P25294	352 aa	Known RBP	4.96	□□□□□ -1.62
snR17b	snR17b	ABD1	P32783	436 aa	Predicted RBP	4.96	□□□□□ -1.62
snR17b	snR17b	YSC83	P32792	385 aa		4.96	□□□□□ -1.62
snR17b	snR17b	PGM1	P33401	570 aa	Known RBP	4.96	□□□□□ -1.62
snR17b	snR17b	BDF1	P35817	686 aa		4.96	□□□□□ -1.62
snR17b	snR17b	KDX1	P36005	433 aa		4.96	□□□□□ -1.62
snR17b	snR17b	RCN1	P36054	211 aa		4.96	□□□□□ -1.62
snR17b	snR17b	RIM2	P38127	377 aa		4.96	□□□□□ -1.62
snR17b	snR17b	PFF1	P38244	976 aa		4.96	□□□□□ -1.62
snR17b	snR17b	APM2	P38700	605 aa		4.96	□□□□□ -1.62
snR17b	snR17b	YJL206C	P39529	758 aa		4.96	□□□□□ -1.62
snR17b	snR17b	TMN3	P40071	706 aa		4.96	□□□□□ -1.62
snR17b	snR17b	TGL3	P40308	642 aa		4.96	□□□□□ -1.62
snR17b	snR17b	PEP8	P40335	379 aa		4.96	□□□□□ -1.62
snR17b	snR17b	SWP82	P43554	623 aa		4.96	□□□□□ -1.62
snR17b	snR17b	POL31	P46957	487 aa		4.96	□□□□□ -1.62
snR17b	snR17b	EMC2	P47133	292 aa	Known RBP	4.96	□□□□□ -1.62
snR17b	snR17b	SED5	Q01590	340 aa		4.96	□□□□□ -1.62
snR17b	snR17b	FMP30	Q02883	468 aa		4.96	□□□□□ -1.62
snR17b	snR17b	NAN1	Q02931	896 aa	Known RBP	4.96	□□□□□ -1.62
snR17b	snR17b	RNY1	Q02933	434 aa	Known RBP	4.96	□□□□□ -1.62
snR17b	snR17b	CEF1	Q03654	590 aa	Predicted RBP	4.96	□□□□□ -1.62
snR17b	snR17b	DUS4	Q06063	367 aa		4.96	□□□□□ -1.62
snR17b	snR17b	YPQ2	Q06328	317 aa		4.96	□□□□□ -1.62
snR17b	snR17b	SMC5	Q08204	1093 aa		4.96	□□□□□ -1.62
snR17b	snR17b	YLR125W	Q12138	136 aa		4.96	□□□□□ -1.62
snR17b	snR17b	HRT3	Q12347	344 aa		4.96	□□□□□ -1.62
snR17b	snR17b	GRX6	Q12438	231 aa		4.96	□□□□□ -1.62
snR17b	snR17b	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
snR17b	snR17b	BRR1	Q99177	341 aa	Predicted RBP	4.96	□□□□□ -1.62
snR17b	snR17b	RPS3	P05750	240 aa	Known RBP	4.95	□□□□□ -1.62
snR17b	snR17b	SNF4	P12904	322 aa		4.95	□□□□□ -1.62
snR17b	snR17b	RNR1	P21524	888 aa	Known RBP	4.95	□□□□□ -1.62
snR17b	snR17b	BRF1	P29056	596 aa		4.95	□□□□□ -1.62
snR17b	snR17b	ITR2	P30606	609 aa		4.95	□□□□□ -1.62
snR17b	snR17b	ZIP1	P31111	875 aa		4.95	□□□□□ -1.62
snR17b	snR17b	TMT1	P32643	299 aa		4.95	□□□□□ -1.62
snR17b	snR17b	TFB1	P32776	642 aa		4.95	□□□□□ -1.62
snR17b	snR17b	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
snR17b	snR17b	OCT1	P35999	772 aa		4.95	□□□□□ -1.62
snR17b	snR17b	NTR2	P36118	322 aa	Predicted RBP	4.95	□□□□□ -1.62
snR17b	snR17b	KAP104	P38217	918 aa	Known RBP	4.95	□□□□□ -1.62
snR17b	snR17b	GIP1	P38229	639 aa		4.95	□□□□□ -1.62
snR17b	snR17b	UTP9	P38882	575 aa	Known RBP	4.95	□□□□□ -1.62
snR17b	snR17b	PET100	P38958	111 aa		4.95	□□□□□ -1.62
snR17b	snR17b	KHA1	P40309	873 aa		4.95	□□□□□ -1.62
snR17b	snR17b	ARG2	P40360	574 aa		4.95	□□□□□ -1.62
snR17b	snR17b	MET18	P40469	1032 aa		4.95	□□□□□ -1.62
snR17b	snR17b	HPM1	P40481	377 aa		4.95	□□□□□ -1.62
snR17b	snR17b	SET4	P42948	560 aa		4.95	□□□□□ -1.62
snR17b	snR17b	CPR7	P47103	393 aa		4.95	□□□□□ -1.62
snR17b	snR17b	HLJ1	P48353	224 aa		4.95	□□□□□ -1.62
snR17b	snR17b	MRK1	P50873	501 aa		4.95	□□□□□ -1.62
snR17b	snR17b	ORC5	P50874	479 aa		4.95	□□□□□ -1.62
snR17b	snR17b	TBF1	Q02457	562 aa		4.95	□□□□□ -1.62
snR17b	snR17b	ERB1	Q04660	807 aa	Known RBP	4.95	□□□□□ -1.62
snR17b	snR17b	SEC10	Q06245	871 aa		4.95	□□□□□ -1.62
snR17b	snR17b	IRC3	Q06683	689 aa		4.95	□□□□□ -1.62
snR17b	snR17b	CDA1	Q06702	301 aa		4.95	□□□□□ -1.62
snR17b	snR17b	AAD15	Q08361	143 aa		4.95	□□□□□ -1.62
snR17b	snR17b	YOR059C	Q08448	450 aa	Known RBP	4.95	□□□□□ -1.62
snR17b	snR17b	PCL8	Q08966	492 aa		4.95	□□□□□ -1.62
snR17b	snR17b	YOR342C	Q12182	319 aa		4.95	□□□□□ -1.62
snR17b	snR17b	MYO1	P08964	1928 aa		4.95	□□□□□ -1.62
snR17b	snR17b	YLR278C	Q05854	1341 aa		4.95	□□□□□ -1.62
snR17b	snR17b	EST1	P17214	699 aa	Predicted RBP	4.94	□□□□□ -1.62
snR17b	snR17b	SLY1	P22213	666 aa		4.94	□□□□□ -1.62
snR17b	snR17b	CAD1	P24813	409 aa	Known RBP	4.94	□□□□□ -1.62
snR17b	snR17b	PTP2	P29461	750 aa		4.94	□□□□□ -1.62
snR17b	snR17b	CCR4	P31384	837 aa	Known RBP	4.94	□□□□□ -1.62
snR17b	snR17b	HEM12	P32347	362 aa	Predicted RBP	4.94	□□□□□ -1.62
snR17b	snR17b	SUV3	P32580	737 aa		4.94	□□□□□ -1.62
snR17b	snR17b	UBP11	P36026	717 aa		4.94	□□□□□ -1.62
snR17b	snR17b	YBR285W	P38354	144 aa		4.94	□□□□□ -1.62
snR17b	snR17b	PHO89	P38361	574 aa		4.94	□□□□□ -1.62
snR17b	snR17b	CBR1	P38626	284 aa	Known RBP	4.94	□□□□□ -1.62
snR17b	snR17b	DYS1	P38791	387 aa		4.94	□□□□□ -1.62
snR17b	snR17b	SHU2	P38957	223 aa		4.94	□□□□□ -1.62
snR17b	snR17b	PIK1	P39104	1066 aa		4.94	□□□□□ -1.62
snR17b	snR17b	SEO1	P39709	593 aa		4.94	□□□□□ -1.62
snR17b	snR17b	SAW1	P39735	261 aa		4.94	□□□□□ -1.62
snR17b	snR17b	AST2	P39945	430 aa	Known RBP	4.94	□□□□□ -1.62
snR17b	snR17b	YEL023C	P39992	682 aa		4.94	□□□□□ -1.62

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