RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W YFL064CP43540 174 aa4.1□□□□□ -1.75
SRO7YPR032W FET5P43561 622 aa4.1□□□□□ -1.75
SRO7YPR032W BPL1P48445 690 aaPredicted RBP4.1□□□□□ -1.75
SRO7YPR032W YPT32P51996 222 aaKnown RBP4.1□□□□□ -1.75
SRO7YPR032W YGL138CP53122 345 aa4.1□□□□□ -1.75
SRO7YPR032W IMP4P53941 290 aaKnown RBP4.1□□□□□ -1.75
SRO7YPR032W RVB1Q03940 463 aaKnown RBP4.1□□□□□ -1.75
SRO7YPR032W VHS3Q08438 674 aa4.1□□□□□ -1.75
SRO7YPR032W VPS54Q12071 889 aa4.1□□□□□ -1.75
SRO7YPR032W GRX6Q12438 231 aa4.1□□□□□ -1.75
SRO7YPR032W YBL111CQ3E7Y5 667 aa4.1□□□□□ -1.75
SRO7YPR032W TEF1P02994 458 aaKnown RBP4.1□□□□□ -1.75
SRO7YPR032W THS1P04801 734 aaKnown RBP4.1□□□□□ -1.75
SRO7YPR032W CHO2P05374 869 aaKnown RBP4.1□□□□□ -1.75
SRO7YPR032W GCR1P07261 785 aa4.1□□□□□ -1.75
SRO7YPR032W NFT1P0CE68 1218 aa4.1□□□□□ -1.75
SRO7YPR032W MIP1P15801 1254 aa4.1□□□□□ -1.75
SRO7YPR032W VMA6P32366 345 aaKnown RBP4.1□□□□□ -1.75
SRO7YPR032W STE5P32917 917 aa4.1□□□□□ -1.75
SRO7YPR032W PDX3P38075 228 aaKnown RBP4.1□□□□□ -1.75
SRO7YPR032W MTG2P38860 518 aa4.1□□□□□ -1.75
SRO7YPR032W YJL070CP40361 888 aa4.1□□□□□ -1.75
SRO7YPR032W ESL1P40456 1118 aa4.1□□□□□ -1.75
SRO7YPR032W APS3P47064 194 aa4.1□□□□□ -1.75
SRO7YPR032W MEH1Q02205 184 aa4.1□□□□□ -1.75
SRO7YPR032W NNT1Q05874 261 aa4.1□□□□□ -1.75
SRO7YPR032W PMT7Q06644 662 aa4.1□□□□□ -1.75
SRO7YPR032W NBA1Q08229 501 aaKnown RBP4.1□□□□□ -1.75
SRO7YPR032W YPR202WQ08993 238 aa4.1□□□□□ -1.75
SRO7YPR032W SNU23Q12368 194 aaPredicted RBP4.1□□□□□ -1.75
SRO7YPR032W URA3P03962 267 aa4.09□□□□□ -1.75
SRO7YPR032W RPL6BP05739 176 aaKnown RBP4.09□□□□□ -1.75
SRO7YPR032W SMI1P32566 505 aa4.09□□□□□ -1.75
SRO7YPR032W PRP40P33203 583 aaKnown RBP4.09□□□□□ -1.75
SRO7YPR032W NAT2P37293 288 aa4.09□□□□□ -1.75
SRO7YPR032W YBR138CP38277 524 aa4.09□□□□□ -1.75
SRO7YPR032W DYS1P38791 387 aa4.09□□□□□ -1.75
SRO7YPR032W TRM5P38793 499 aa4.09□□□□□ -1.75
SRO7YPR032W MUK1Q02866 612 aa4.09□□□□□ -1.75
SRO7YPR032W DLT1Q04216 342 aa4.09□□□□□ -1.75
SRO7YPR032W YCS4Q06156 1176 aa4.09□□□□□ -1.75
SRO7YPR032W TFC6Q06339 672 aa4.09□□□□□ -1.75
SRO7YPR032W TMA46Q12000 345 aaKnown RBP4.09□□□□□ -1.75
SRO7YPR032W YOR342CQ12182 319 aa4.09□□□□□ -1.75
SRO7YPR032W YRF1-3P0CX14 1859 aa4.09□□□□□ -1.75
SRO7YPR032W YRF1-7P0CX15 1859 aa4.09□□□□□ -1.75
SRO7YPR032W YRF1-6P53819 1859 aa4.09□□□□□ -1.75
SRO7YPR032W TOP3P13099 656 aa4.09□□□□□ -1.75
SRO7YPR032W HXT2P23585 541 aa4.09□□□□□ -1.75
SRO7YPR032W MRPL32P25348 183 aa4.09□□□□□ -1.75
SRO7YPR032W RAD14P28519 371 aa4.09□□□□□ -1.75
SRO7YPR032W MRF1P30775 413 aaPredicted RBP4.09□□□□□ -1.75
SRO7YPR032W TPS2P31688 896 aaKnown RBP4.09□□□□□ -1.75
SRO7YPR032W NIC96P34077 839 aa4.09□□□□□ -1.75
SRO7YPR032W BLI1P35727 113 aa4.09□□□□□ -1.75
SRO7YPR032W GLG1P36143 616 aa4.09□□□□□ -1.75
SRO7YPR032W RFS1P38234 210 aaKnown RBP4.09□□□□□ -1.75
SRO7YPR032W CEM1P39525 442 aa4.09□□□□□ -1.75
SRO7YPR032W YMR147WP40218 223 aaKnown RBP4.09□□□□□ -1.75
SRO7YPR032W YGR210CP42942 411 aa4.09□□□□□ -1.75
SRO7YPR032W MDE1P47095 244 aa4.09□□□□□ -1.75
SRO7YPR032W YNR029CP53729 429 aaKnown RBP4.09□□□□□ -1.75
SRO7YPR032W YLR257WQ06146 321 aaKnown RBP4.09□□□□□ -1.75
SRO7YPR032W BCP1Q06338 283 aa4.09□□□□□ -1.75
SRO7YPR032W ASA1Q06822 443 aa4.09□□□□□ -1.75
SRO7YPR032W NTG2Q08214 380 aa4.09□□□□□ -1.75
SRO7YPR032W INP54Q08227 384 aaKnown RBP4.09□□□□□ -1.75
SRO7YPR032W MCH5Q08777 521 aa4.09□□□□□ -1.75
SRO7YPR032W TCO89Q08921 799 aa4.09□□□□□ -1.75
SRO7YPR032W KSS1P14681 368 aa4.08□□□□□ -1.76
SRO7YPR032W ATP12P22135 325 aa4.08□□□□□ -1.76
SRO7YPR032W SAN1P22470 610 aa4.08□□□□□ -1.76
SRO7YPR032W MEF1P25039 761 aa4.08□□□□□ -1.76
SRO7YPR032W PRR1P28708 518 aa4.08□□□□□ -1.76
SRO7YPR032W CRM1P30822 1084 aaKnown RBP4.08□□□□□ -1.76
SRO7YPR032W MIF2P35201 549 aa4.08□□□□□ -1.76
SRO7YPR032W VHC1P38329 1120 aa4.08□□□□□ -1.76
SRO7YPR032W MSG5P38590 489 aa4.08□□□□□ -1.76
SRO7YPR032W YHR131CP38835 850 aa4.08□□□□□ -1.76
SRO7YPR032W SSP1P38871 571 aa4.08□□□□□ -1.76
SRO7YPR032W SEC31P38968 1273 aaKnown RBP4.08□□□□□ -1.76
SRO7YPR032W MTW1P39731 289 aa4.08□□□□□ -1.76
SRO7YPR032W SBE2P42223 864 aaKnown RBP4.08□□□□□ -1.76
SRO7YPR032W MSE1P48525 536 aa4.08□□□□□ -1.76
SRO7YPR032W RIM21P48565 533 aa4.08□□□□□ -1.76
SRO7YPR032W NUP84P52891 726 aa4.08□□□□□ -1.76
SRO7YPR032W YNL193WP53870 558 aa4.08□□□□□ -1.76
SRO7YPR032W PRO2P54885 456 aaKnown RBP4.08□□□□□ -1.76
SRO7YPR032W SLT2Q00772 484 aa4.08□□□□□ -1.76
SRO7YPR032W INA17Q02888 182 aa4.08□□□□□ -1.76
SRO7YPR032W YDR476CQ03362 224 aa4.08□□□□□ -1.76
SRO7YPR032W CEF1Q03654 590 aaPredicted RBP4.08□□□□□ -1.76
SRO7YPR032W RRP17Q04031 235 aaPredicted RBP4.08□□□□□ -1.76
SRO7YPR032W MLC2Q06580 163 aa4.08□□□□□ -1.76
SRO7YPR032W RSC3Q06639 885 aa4.08□□□□□ -1.76
SRO7YPR032W CDA1Q06702 301 aa4.08□□□□□ -1.76
SRO7YPR032W GTT2Q12390 233 aa4.08□□□□□ -1.76
SRO7YPR032W NBL1Q3E7Y6 73 aa4.08□□□□□ -1.76
SRO7YPR032W GPM1P00950 247 aaKnown RBP4.08□□□□□ -1.76
SRO7YPR032W CDC24P11433 854 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms